BLASTX nr result

ID: Cimicifuga21_contig00021285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021285
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32067.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002267941.1| PREDICTED: microtubule-associated protein SP...   122   3e-26
emb|CBI15107.3| unnamed protein product [Vitis vinifera]              119   4e-25
ref|XP_002280600.1| PREDICTED: microtubule-associated protein TO...   119   4e-25
ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>emb|CBI32067.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  122 bits (307), Expect = 3e-26
 Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 5/194 (2%)
 Frame = +3

Query: 9   QTKRNITRRSSFPPSKNSPATNSKKRNPLKSTNK-TSTPALFHKLDRTKPSECKIEVSLP 185
           Q K+ I  RS  PPS NS  T ++KR+PL+S+N   ST A+F KLD  KPS+ K+EV++P
Sbjct: 334 QPKKIIPTRS--PPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVP 391

Query: 186 QTLSFSVDCELNYEEGNEKVQQPETNKKVQYSEMNESRQYSKPERQGNFFTKNNDEEKHR 365
              S  V CE + +     V           SE N +   S+PE     F+K ++E+ H+
Sbjct: 392 HPSSSKVACEDDLKRRYLVVSD---------SEENGNCGDSRPETNRVLFSKISNEKMHK 442

Query: 366 YRGLRSASRVVPYSEEN-SESTVINXXXXXXXXXXXXXX---LSLIWKQLLQIENRQSSL 533
           +  LRS SR+VP+ E N SES V++                 LSLI KQL+QIEN+QSS+
Sbjct: 443 FGCLRSGSRIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSM 502

Query: 534 LDLLQRFMGSSQNG 575
           L+LLQRF+G+SQ+G
Sbjct: 503 LNLLQRFIGNSQSG 516


>ref|XP_002267941.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
           vinifera]
          Length = 654

 Score =  122 bits (307), Expect = 3e-26
 Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 5/194 (2%)
 Frame = +3

Query: 9   QTKRNITRRSSFPPSKNSPATNSKKRNPLKSTNK-TSTPALFHKLDRTKPSECKIEVSLP 185
           Q K+ I  RS  PPS NS  T ++KR+PL+S+N   ST A+F KLD  KPS+ K+EV++P
Sbjct: 335 QPKKIIPTRS--PPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVP 392

Query: 186 QTLSFSVDCELNYEEGNEKVQQPETNKKVQYSEMNESRQYSKPERQGNFFTKNNDEEKHR 365
              S  V CE + +     V           SE N +   S+PE     F+K ++E+ H+
Sbjct: 393 HPSSSKVACEDDLKRRYLVVSD---------SEENGNCGDSRPETNRVLFSKISNEKMHK 443

Query: 366 YRGLRSASRVVPYSEEN-SESTVINXXXXXXXXXXXXXX---LSLIWKQLLQIENRQSSL 533
           +  LRS SR+VP+ E N SES V++                 LSLI KQL+QIEN+QSS+
Sbjct: 444 FGCLRSGSRIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSM 503

Query: 534 LDLLQRFMGSSQNG 575
           L+LLQRF+G+SQ+G
Sbjct: 504 LNLLQRFIGNSQSG 517


>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  119 bits (298), Expect = 4e-25
 Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
 Frame = +3

Query: 24  ITRRSSFPPS-----KNSPATNSKKRNPLKSTNKTSTPALFHKLDRTKPSECKIEVSLPQ 188
           + R+ S P S      +S AT  ++R P+  +      A+F KL+R K S+ K+EV+ P 
Sbjct: 208 LMRKKSIPTSISPQLNSSSATTVRRRGPVDKSGS----AMFRKLERKKASDLKVEVTAPH 263

Query: 189 TLSFSVDCELNYEEGNEKVQQPETNKKVQYSEMNESRQYSKPERQGNFFTKNNDEEKHRY 368
             S     E   ++ +EK   PE  +       NE  +++KPE +   FTKN+D++ +++
Sbjct: 264 APSVMRIHEDGLKKKDEKA--PERGE-------NEKNRFTKPETRRVLFTKNSDDKMNKF 314

Query: 369 RGLRSASRVVPYSEENSEST--VINXXXXXXXXXXXXXXLSLIWKQLLQIENRQSSLLDL 542
            G RS SRVVP  EENSE+T  V N              LSLI KQL+QIEN+QSSLL+L
Sbjct: 315 GGFRSGSRVVPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQSSLLNL 374

Query: 543 LQRFMGSSQNG 575
           L++FMGSSQNG
Sbjct: 375 LEKFMGSSQNG 385


>ref|XP_002280600.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
           vinifera]
          Length = 638

 Score =  119 bits (298), Expect = 4e-25
 Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
 Frame = +3

Query: 24  ITRRSSFPPS-----KNSPATNSKKRNPLKSTNKTSTPALFHKLDRTKPSECKIEVSLPQ 188
           + R+ S P S      +S AT  ++R P+  +      A+F KL+R K S+ K+EV+ P 
Sbjct: 325 LMRKKSIPTSISPQLNSSSATTVRRRGPVDKSGS----AMFRKLERKKASDLKVEVTAPH 380

Query: 189 TLSFSVDCELNYEEGNEKVQQPETNKKVQYSEMNESRQYSKPERQGNFFTKNNDEEKHRY 368
             S     E   ++ +EK   PE  +       NE  +++KPE +   FTKN+D++ +++
Sbjct: 381 APSVMRIHEDGLKKKDEKA--PERGE-------NEKNRFTKPETRRVLFTKNSDDKMNKF 431

Query: 369 RGLRSASRVVPYSEENSEST--VINXXXXXXXXXXXXXXLSLIWKQLLQIENRQSSLLDL 542
            G RS SRVVP  EENSE+T  V N              LSLI KQL+QIEN+QSSLL+L
Sbjct: 432 GGFRSGSRVVPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQSSLLNL 491

Query: 543 LQRFMGSSQNG 575
           L++FMGSSQNG
Sbjct: 492 LEKFMGSSQNG 502


>ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|222859297|gb|EEE96844.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  118 bits (296), Expect = 6e-25
 Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 2/189 (1%)
 Frame = +3

Query: 15  KRNITRRSSFPPSKNSPATNSKKRNPLKSTNKTSTPALFHKLDRTKPSECKIEVSLPQTL 194
           K++I    + PP  +  AT ++KR PLKST++ + PA++ K+D+ K  + K+E+S+P ++
Sbjct: 325 KKSILDFKNTPPDSSLIATTARKRGPLKSTDEGTNPAMYGKVDQKKMVDWKVEISVPNSI 384

Query: 195 SFSVDCELNYEEGNEKVQQPETNKKVQYSEMNESRQYSKPERQGNFFTKNNDEEKHRYRG 374
           S +   E + +  N KV +               ++++K E + + F+KN+D++K ++ G
Sbjct: 385 SSTAAGENDLKMKNAKVPE---------------KRFAKAETKRSLFSKNSDDKKLKFGG 429

Query: 375 LRSASRVVPYSEENSESTVI--NXXXXXXXXXXXXXXLSLIWKQLLQIENRQSSLLDLLQ 548
            +S SRV P  EE+  STV+  +              LSLI  QL+QIE +QSSLLDLLQ
Sbjct: 430 FKSGSRVAPCHEESPHSTVVASSGTENHHSNHNECEDLSLIRFQLVQIERQQSSLLDLLQ 489

Query: 549 RFMGSSQNG 575
            F+GSSQNG
Sbjct: 490 SFIGSSQNG 498


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