BLASTX nr result

ID: Cimicifuga21_contig00021273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021273
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272047.2| PREDICTED: tubby-like protein 8-like [Vitis ...   251   2e-64
ref|XP_002512757.1| Tubby protein, putative [Ricinus communis] g...   243   5e-62
ref|XP_004135888.1| PREDICTED: tubby-like protein 8-like [Cucumi...   232   6e-59
ref|XP_002299159.1| predicted protein [Populus trichocarpa] gi|2...   227   2e-57
ref|XP_003571017.1| PREDICTED: tubby-like protein 4-like [Brachy...   225   1e-56

>ref|XP_002272047.2| PREDICTED: tubby-like protein 8-like [Vitis vinifera]
           gi|298204762|emb|CBI25260.3| unnamed protein product
           [Vitis vinifera]
          Length = 377

 Score =  251 bits (640), Expect = 2e-64
 Identities = 117/160 (73%), Positives = 142/160 (88%)
 Frame = +2

Query: 80  QGSMLDPLQKQSKLLLAVVGFVPTITTCTGSYRSLKAWIPKHQFMQLKNTSKIQHVSGLP 259
           QG+ L+ + K+SK LLAVV F+PTI T TGSYR+++AWIPKHQ MQLKN+++IQH++GLP
Sbjct: 218 QGTCLNSVAKRSKPLLAVVTFMPTIATLTGSYRNIRAWIPKHQSMQLKNSTQIQHINGLP 277

Query: 260 KDWEAEMNKTQHLFSRVPHYNNFSRQHELDFRERGRAGLKIQSSVKNFQLSVEENGRQST 439
            DWE++ +K   LFSRVPHYN+ S+Q+ELDFRERGRAGL+IQSSVKNFQL++EE G+Q+ 
Sbjct: 278 NDWESKKDKVHQLFSRVPHYNSVSKQYELDFRERGRAGLRIQSSVKNFQLTLEEKGKQTI 337

Query: 440 LQLGRVEKMKYVMDFRYPLTGYQAFCICLASIDSKLCCTV 559
           LQLGRV K KYVMD+RYPLTGYQAFCICLASIDSKLCCTV
Sbjct: 338 LQLGRVGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCTV 377


>ref|XP_002512757.1| Tubby protein, putative [Ricinus communis]
           gi|223547768|gb|EEF49260.1| Tubby protein, putative
           [Ricinus communis]
          Length = 407

 Score =  243 bits (619), Expect = 5e-62
 Identities = 113/160 (70%), Positives = 137/160 (85%)
 Frame = +2

Query: 80  QGSMLDPLQKQSKLLLAVVGFVPTITTCTGSYRSLKAWIPKHQFMQLKNTSKIQHVSGLP 259
           QGS L+   KQ   LL+VV FVPT+TTC GSYRS++ +IPKHQ M LKNT+++QH++GLP
Sbjct: 248 QGSRLNSPSKQRNPLLSVVTFVPTVTTCMGSYRSMRVYIPKHQSMLLKNTAQMQHINGLP 307

Query: 260 KDWEAEMNKTQHLFSRVPHYNNFSRQHELDFRERGRAGLKIQSSVKNFQLSVEENGRQST 439
           KDWE ++ K   L SR P+YNNFSRQ+ELD+R+RGRAGL+IQ SVKNFQL++EENG+Q+ 
Sbjct: 308 KDWEGKVEKVHQLHSRSPNYNNFSRQYELDYRDRGRAGLRIQRSVKNFQLTLEENGKQTI 367

Query: 440 LQLGRVEKMKYVMDFRYPLTGYQAFCICLASIDSKLCCTV 559
           LQLGRV K K+VMDFRYPLTGYQAFCICLAS+DSKLCCTV
Sbjct: 368 LQLGRVGKSKFVMDFRYPLTGYQAFCICLASVDSKLCCTV 407


>ref|XP_004135888.1| PREDICTED: tubby-like protein 8-like [Cucumis sativus]
           gi|449509158|ref|XP_004163512.1| PREDICTED: tubby-like
           protein 8-like [Cucumis sativus]
          Length = 408

 Score =  232 bits (592), Expect = 6e-59
 Identities = 111/162 (68%), Positives = 135/162 (83%), Gaps = 2/162 (1%)
 Frame = +2

Query: 80  QGSMLDPLQKQSKLLLAVVGFVPTITTCTGSYRSLKAWIPKHQFMQLKNTSKIQHVSGLP 259
           QGS L P+  QS+ LL  V F PTITT TGS+RS+KA+IPKHQ MQLKNT+++QH++GLP
Sbjct: 247 QGSRLKPIPTQSRSLLGAVTFTPTITTWTGSHRSMKAFIPKHQSMQLKNTNQVQHIAGLP 306

Query: 260 KDWEAEMNKTQHLFSRVPHYNNFSRQHELDFRERGRA--GLKIQSSVKNFQLSVEENGRQ 433
           ++WE E  K   L S+VP YN  S+Q+ELDFR+RGRA  GL IQ+SVKNFQL++EENG+Q
Sbjct: 307 REWEEEKAKVHQLVSKVPQYNKISKQYELDFRDRGRAVSGLVIQTSVKNFQLTLEENGKQ 366

Query: 434 STLQLGRVEKMKYVMDFRYPLTGYQAFCICLASIDSKLCCTV 559
           + LQLGR+ K KYVMD+RYPLTGYQAFCICLASIDSKLCC+V
Sbjct: 367 TILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 408


>ref|XP_002299159.1| predicted protein [Populus trichocarpa] gi|222846417|gb|EEE83964.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  227 bits (579), Expect = 2e-57
 Identities = 107/151 (70%), Positives = 129/151 (85%)
 Frame = +2

Query: 107 KQSKLLLAVVGFVPTITTCTGSYRSLKAWIPKHQFMQLKNTSKIQHVSGLPKDWEAEMNK 286
           K+  LLLAVV F PTI T TGSYR ++A++PKHQ MQLKNT+ +QH++GL +DWE +M+K
Sbjct: 257 KRGNLLLAVVTFKPTIATWTGSYRIMRAYVPKHQSMQLKNTTLMQHINGLARDWEGKMDK 316

Query: 287 TQHLFSRVPHYNNFSRQHELDFRERGRAGLKIQSSVKNFQLSVEENGRQSTLQLGRVEKM 466
              L SR P YNN S+Q+ELDFR+RGRAGL IQSSVKNFQL++EENG+Q+ LQLGRV K 
Sbjct: 317 VHKLCSRTPRYNNMSKQYELDFRDRGRAGLGIQSSVKNFQLTLEENGKQTILQLGRVGKS 376

Query: 467 KYVMDFRYPLTGYQAFCICLASIDSKLCCTV 559
           K+VMDFRYPLTGYQAFCICLASIDSKLCC++
Sbjct: 377 KFVMDFRYPLTGYQAFCICLASIDSKLCCSM 407


>ref|XP_003571017.1| PREDICTED: tubby-like protein 4-like [Brachypodium distachyon]
          Length = 394

 Score =  225 bits (573), Expect = 1e-56
 Identities = 108/163 (66%), Positives = 132/163 (80%), Gaps = 3/163 (1%)
 Frame = +2

Query: 80  QGSMLDPLQKQSKLLLAVVGFVPTITTCTGSYRSLKAWIPKHQFMQLKNTS--KIQHVSG 253
           QG+ +D L  QSK LL VV F PTITT TGS+RS++AWIPK Q MQL+  S  +IQH+ G
Sbjct: 232 QGNRIDELNSQSKRLLGVVAFAPTITTLTGSFRSMRAWIPKSQSMQLRTNSSAQIQHIGG 291

Query: 254 LPKDWEAEMNKTQHLFSRVPHYNNFSRQHELDFRER-GRAGLKIQSSVKNFQLSVEENGR 430
           LPKDWE + ++   L SR P YNN ++++ELDFRER GR G K+Q+SVKNFQ+++EENGR
Sbjct: 292 LPKDWEEKASRADKLCSRSPFYNNMTKRYELDFRERVGRMGYKVQTSVKNFQMTLEENGR 351

Query: 431 QSTLQLGRVEKMKYVMDFRYPLTGYQAFCICLASIDSKLCCTV 559
           Q+ LQLGRV K KY+MDFRYPLTGYQAFCICLAS+DSKLCCT+
Sbjct: 352 QTILQLGRVGKSKYIMDFRYPLTGYQAFCICLASMDSKLCCTL 394


Top