BLASTX nr result

ID: Cimicifuga21_contig00021266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021266
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   109   8e-22
emb|CBI22427.3| unnamed protein product [Vitis vinifera]              108   1e-21
ref|XP_002304380.1| predicted protein [Populus trichocarpa] gi|1...   103   5e-20
ref|XP_002323743.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19
ref|XP_002323744.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-19

>ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
           max]
          Length = 233

 Score =  109 bits (272), Expect = 8e-22
 Identities = 69/182 (37%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
 Frame = +3

Query: 93  AKLIPIATFKDPSSGFLAGDNCRFGVEVSVRERICKGECFSMKYNPVPVLLEWQVKEFSK 272
           AK I I TF DPS+G+L  D C FG EV V +   KG+C SM + P+P+   W+   FS 
Sbjct: 49  AKFIDIDTFNDPSNGYLMDDTCVFGAEVFVVKTTTKGDCLSMIHGPIPLSHSWKFDNFSL 108

Query: 273 VKEMGYCQSEFLSVEQHRCRIMIYPKGDCTEAKNKFISIYMMFDDFEDYEHLCEKLYGKC 452
            K   Y +SE      +R ++++YP G   E K   IS+++  +      +   KL  +C
Sbjct: 109 AKLDKY-ESESFVGGNYRWKLILYPNG-IVEGKGNSISLFLTLEVSTLPPN--TKLVVEC 164

Query: 453 LLRVKGQSLVEDVQFEGTQWFAEQST--GRSQFMELSVLTDPNNGFVVNDILIIQAEVTI 626
            LR K Q      Q    + F+  ++  G  Q + L+ LTDPN+GF+VND  I++AE TI
Sbjct: 165 TLRAKKQISGHHAQTGFCRKFSSSNSTWGTRQLVALAKLTDPNSGFLVNDTCILEAEFTI 224

Query: 627 LG 632
           LG
Sbjct: 225 LG 226


>emb|CBI22427.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  108 bits (271), Expect = 1e-21
 Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
 Frame = +3

Query: 6   FIFTILLRYHL---DTGETVLIFNEQKKLRHFAKLIPIATFKDPSSGFLAGDNCRFGVEV 176
           F+F  +   +L   DT   V  FN  K    FA+ +P+    DP +G+L  D+C FG EV
Sbjct: 169 FVFNHIHEEYLTVQDTDGKVRHFNVMKTQCGFAQFLPLDVLTDPCNGYLMDDSCIFGAEV 228

Query: 177 SVRERICKGECFSMKYNPVPVLLEWQVKEFSKVKEMGYCQSEFLSVEQHRCRIMIYPKGD 356
            V +   KGEC SM   P      W ++ FS++K+     SE  +V+  + ++++YPKG+
Sbjct: 229 FVIKYSGKGECLSMIKEPDDGTFTWMIENFSRLKQEA-IYSEIFTVKDFKWKLVVYPKGN 287

Query: 357 CTEAKNKFISIYMMFDDFEDYEHLCEKLYGKCLLRVK-----GQSLVEDVQFEGTQWFAE 521
             +AKNK +S+++   +     H   KLY +  L VK     G      V+  G  WF +
Sbjct: 288 -YKAKNKSLSLFLELANRGTLHHQ-RKLYTEFELLVKEQCNGGHVKPSHVKLNGQTWFCD 345

Query: 522 --QSTGRSQFMELSVLTDPNNGFVVNDILIIQAEVTILGSLKRV 647
             +  G S  + LS L D +N F++ND LI++A++ ++   K +
Sbjct: 346 SIKDWGFSNMISLSDLKDKSNHFILNDTLIVEAKIMLMMHSKNI 389


>ref|XP_002304380.1| predicted protein [Populus trichocarpa] gi|118485977|gb|ABK94833.1|
           unknown [Populus trichocarpa]
           gi|222841812|gb|EEE79359.1| predicted protein [Populus
           trichocarpa]
          Length = 321

 Score =  103 bits (256), Expect = 5e-20
 Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
 Frame = +3

Query: 63  FNEQKKLRHFAKLIPIATFKDPSSGFLAGDNCRFGVEVSVRERICKGECFSMKYNPVPVL 242
           F+  K    F +LIP+  F D S G+L  D C FG E+ V +   KGEC ++   PV   
Sbjct: 127 FHGMKTELGFDQLIPLTIFNDESKGYLIDDRCIFGAEIFVIKPTGKGECLTLVNQPVSDT 186

Query: 243 LEWQVKEFSKVKEMGYCQSEFLSVEQHRCRIMIYPKGDCTEAKNKFISIYMMFDDFEDYE 422
             W+++ FS + +  Y +S+  S   ++  +++YPKG+ TE K K +SIY+  +DFE   
Sbjct: 187 FTWKIQNFSALDQESY-KSQVFSFGGYKWALLVYPKGNSTE-KGKSLSIYLKMEDFETLP 244

Query: 423 HLCEK-LYGKCLLRVKGQSLVEDVQFEGTQWFAE--QSTGRSQFMELSVLTDPNNGFVVN 593
             C +  Y + +LRVK Q   + ++ +    F+   +  G   FM L  +     GF+VN
Sbjct: 245 --CGRTTYAEYMLRVKDQLFGKHIEKKAYSHFSYSIKDWGHLNFMSLDDVNALPKGFLVN 302

Query: 594 DILIIQAEVTILGSLK 641
           D L ++ ++ ++  +K
Sbjct: 303 DTLAVEVQIHVITVVK 318


>ref|XP_002323743.1| predicted protein [Populus trichocarpa] gi|222866745|gb|EEF03876.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  102 bits (253), Expect = 1e-19
 Identities = 61/186 (32%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
 Frame = +3

Query: 90  FAKLIPIATFKDPSSGFLAGDNCRFGVEVSVRERICKGECFSMKYNPVPVLLEWQVKEFS 269
           F +++P++TF + S+G+L GD+C FG EV V +   KGE FSM  +P      W+V+ FS
Sbjct: 126 FPQMLPLSTFNNASNGYLIGDSCVFGAEVFVVKSEGKGEHFSMIKDPSDGTFTWEVQYFS 185

Query: 270 KVKEMGYCQSEFLSVEQHRCRIMIYPKGDCTEAKNKFISIYMMFDDFEDYEHLCEKLYGK 449
            +    Y    +L+   H  ++ ++P G   + + K++S+++  DD  +Y H   KL+ +
Sbjct: 186 GLTGEFYYSQVYLA-GGHEWKLKLFPNGHIKQ-RGKYLSLFVELDDCTNY-HTGWKLFVE 242

Query: 450 CLLRVKGQSLVEDVQFEGTQWF--AEQSTGRSQFMELSVLTDPNNGFVVNDILIIQAEVT 623
             LR+K Q   +  +    +WF  +E + G   F+ LS + +P+N F+VND LI++  + 
Sbjct: 243 FTLRIKDQVQSQHREKTFHKWFSASENNWGLVSFISLSDIKNPSNNFIVNDTLIVEGVLN 302

Query: 624 ILGSLK 641
            L  LK
Sbjct: 303 RLSVLK 308


>ref|XP_002323744.1| predicted protein [Populus trichocarpa] gi|222866746|gb|EEF03877.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  100 bits (249), Expect = 4e-19
 Identities = 64/188 (34%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
 Frame = +3

Query: 90  FAKLIPIATFKDPSSGFLAGDNCRFGVEVSVRERICKGECFSMKYNPVPVLLEWQVKEFS 269
           F +++P++TF + S+G+L GD+C FG EV V +   KGE FSM  +P      W+V+ FS
Sbjct: 105 FPQMLPLSTFNNASNGYLIGDSCVFGAEVFVVKSEGKGEHFSMIKDPSDGTFTWEVQYFS 164

Query: 270 KVKEMGYCQSEFLSVEQHRCRIMIYPKGDCTEAKNKFISIYMMFDDFEDYEHLCEKLYGK 449
            +    Y    +L+   H  ++ ++PKG   + + K++S+++  DD     H   KL+ +
Sbjct: 165 GLTGEFYYSQVYLA-GGHEWKLKLFPKGHIKQ-RGKYLSLFLELDDCTK-SHTGWKLFVE 221

Query: 450 CLLRVKGQSLVEDVQFEGT--QWF--AEQSTGRSQFMELSVLTDPNNGFVVNDILIIQAE 617
             LR+K Q  V+    E T  +WF  +E + G   F+ LS + +P+N F+VND LI++  
Sbjct: 222 FTLRIKDQ--VQSHHHEKTIHKWFSASENNWGLVSFISLSDIKNPSNNFIVNDTLIVEGV 279

Query: 618 VTILGSLK 641
           +  L  LK
Sbjct: 280 LNRLSVLK 287


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