BLASTX nr result

ID: Cimicifuga21_contig00021260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021260
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237277.1| uncharacterized protein LOC100305828 [Glycin...    73   2e-11
ref|XP_002302833.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_003544011.1| PREDICTED: uncharacterized protein LOC100783...    67   1e-09
ref|XP_002869678.1| hypothetical protein ARALYDRAFT_492298 [Arab...    65   4e-09
emb|CAA23074.1| hypothetical protein [Arabidopsis thaliana] gi|7...    65   7e-09

>ref|NP_001237277.1| uncharacterized protein LOC100305828 [Glycine max]
           gi|255626717|gb|ACU13703.1| unknown [Glycine max]
          Length = 200

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/93 (38%), Positives = 53/93 (56%)
 Frame = -3

Query: 483 VVQGMTVSAAFQLDSGDVRFYDAVVLDKDSKNHKFEEGEEVCTCKYLLFWLNKNNIGTKT 304
           + +G+ V A       D+R+YDAVV       H +E G+E C C ++LFWL   N G  T
Sbjct: 86  LAEGVWVCACQCFGDDDLRYYDAVVDGVQHGKHYWEAGKETCFCTFILFWLQGPNAGNLT 145

Query: 303 LAKVEDICFLQSGNAQTDPTLALFLKMSREKLK 205
              ++DIC +Q    Q DP +A FL+M+R K++
Sbjct: 146 ATTIQDICMVQL-ERQLDPVVASFLEMARRKIE 177


>ref|XP_002302833.1| predicted protein [Populus trichocarpa] gi|222844559|gb|EEE82106.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/93 (41%), Positives = 54/93 (58%)
 Frame = -3

Query: 483 VVQGMTVSAAFQLDSGDVRFYDAVVLDKDSKNHKFEEGEEVCTCKYLLFWLNKNNIGTKT 304
           VV G+ V A+   D  D RFYDAVV D   K H FE+G E+C+C +++   +    G   
Sbjct: 88  VVGGVVVCASHSFDGSDNRFYDAVVDDVVHKEHSFEQGGEMCSCTFIVIMQHGPVAGCFV 147

Query: 303 LAKVEDICFLQSGNAQTDPTLALFLKMSREKLK 205
              +E +C +QS  A  DP L LFLKM +E+L+
Sbjct: 148 NKTIESLCLVQS-YACLDPNLQLFLKMVKERLQ 179


>ref|XP_003544011.1| PREDICTED: uncharacterized protein LOC100783198 [Glycine max]
          Length = 305

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/96 (36%), Positives = 51/96 (53%)
 Frame = -3

Query: 474 GMTVSAAFQLDSGDVRFYDAVVLDKDSKNHKFEEGEEVCTCKYLLFWLNKNNIGTKTLAK 295
           G  V A       DVRFYDAV+       H +E GEE C C +LL+WL+  N    T   
Sbjct: 95  GARVCACHSFAPDDVRFYDAVIDGVQENEHSWEIGEEECLCTFLLYWLHGPNARNLTAEP 154

Query: 294 VEDICFLQSGNAQTDPTLALFLKMSREKLKVASQSF 187
           +++IC +QS   + DP +  FL M+ +K+ + S  +
Sbjct: 155 IDNICEVQSA-WELDPAVTSFLDMAGKKIHLFSSRY 189


>ref|XP_002869678.1| hypothetical protein ARALYDRAFT_492298 [Arabidopsis lyrata subsp.
           lyrata] gi|297315514|gb|EFH45937.1| hypothetical protein
           ARALYDRAFT_492298 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -3

Query: 483 VVQGMTVSAAFQLDSGDVRFYDAVVLDKDSKNH-KFEEGEEVCTCKYLLFWLNKNNIGTK 307
           V +G  V A     +G+V+FYDA+V+  +   H + EEG EVC C + LFW     I   
Sbjct: 106 VHEGTKVCATCPSVTGEVKFYDAIVVTVERMKHERDEEGNEVCGCDFKLFWKQGPYINQV 165

Query: 306 TLAKVEDICFLQSGNAQTDPTLALFLKMSREKL 208
           T AKV DIC L++ + + +P +  FLK +R KL
Sbjct: 166 TTAKVGDIC-LRAEDNRMNPKVVSFLKEARRKL 197


>emb|CAA23074.1| hypothetical protein [Arabidopsis thaliana]
           gi|7269384|emb|CAB81344.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 256

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = -3

Query: 483 VVQGMTVSAAFQLDSGDVRFYDAVVLDKD-SKNHKFEEGEEVCTCKYLLFWLNKNNIGTK 307
           V +G  V A F   + +V+FYDA+V+  + +K+ + EEG E+C C + LFW     I   
Sbjct: 106 VHEGTQVCATFPSVTEEVKFYDAIVVTVERTKHERDEEGNEICGCDFKLFWKQGPWINQV 165

Query: 306 TLAKVEDICFLQSGNAQTDPTLALFLKMSREKL 208
           T AKV DIC L++ + + +P +  FLK +R KL
Sbjct: 166 TTAKVGDIC-LRAKDNRINPKVVSFLKEARRKL 197


Top