BLASTX nr result
ID: Cimicifuga21_contig00021245
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021245 (562 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2... 65 6e-09 ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glyc... 63 4e-08 ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc... 56 3e-06 emb|CAC10514.1| outwardly rectifying potassium channel [Samanea ... 55 1e-05 >ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|222843391|gb|EEE80938.1| predicted protein [Populus trichocarpa] Length = 841 Score = 74.3 bits (181), Expect = 1e-11 Identities = 40/60 (66%), Positives = 44/60 (73%), Gaps = 7/60 (11%) Frame = +3 Query: 402 LSDRIHSSRGSRFNLIENEFGGLNWN-------WRRKISRENVINGIRGFSQSFVINPDN 560 L DRI SSRGSRFNLIE EFG +N N WRRK+SRE+VINGIR S FVI+PDN Sbjct: 29 LKDRIKSSRGSRFNLIEKEFGLVNNNGSSSMTSWRRKLSRESVINGIRYVSSGFVIHPDN 88 >ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1| predicted protein [Populus trichocarpa] Length = 821 Score = 65.5 bits (158), Expect = 6e-09 Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 7/60 (11%) Frame = +3 Query: 402 LSDRIHSSRGSRFNLIENEFGGLN-------WNWRRKISRENVINGIRGFSQSFVINPDN 560 L DRI SSRGSRFNL+ENEFG +N N RRK+SRE+VINGIR S I+PDN Sbjct: 17 LRDRIKSSRGSRFNLLENEFGLVNNTESSLITNLRRKLSRESVINGIRYVSTGPAIHPDN 76 >ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glycine max] Length = 850 Score = 62.8 bits (151), Expect = 4e-08 Identities = 33/53 (62%), Positives = 41/53 (77%) Frame = +3 Query: 402 LSDRIHSSRGSRFNLIENEFGGLNWNWRRKISRENVINGIRGFSQSFVINPDN 560 L DR+ SSRGSRF+LIEN+ G LN W K SR+ +++GIRGFS FVI+PDN Sbjct: 53 LRDRLKSSRGSRFDLIENQLG-LNSTWS-KFSRQALLHGIRGFSVDFVIHPDN 103 >ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max] Length = 849 Score = 56.2 bits (134), Expect = 3e-06 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 4/57 (7%) Frame = +3 Query: 402 LSDRIHSSRGSRFNLIENEFGGLNWNWRRKISRENVINGIRGFS----QSFVINPDN 560 L DR+ SS+GS FNLIEN+ GLN W K SR+ +++GIRGFS + FVI+PDN Sbjct: 48 LRDRLKSSQGSMFNLIENQL-GLNSTW-SKFSRQALLHGIRGFSMDLVKDFVIHPDN 102 >emb|CAC10514.1| outwardly rectifying potassium channel [Samanea saman] Length = 841 Score = 54.7 bits (130), Expect = 1e-05 Identities = 30/52 (57%), Positives = 40/52 (76%) Frame = +3 Query: 402 LSDRIHSSRGSRFNLIENEFGGLNWNWRRKISRENVINGIRGFSQSFVINPD 557 L DR+ SSRGSRF LIE+E LN +RK+SR V++GIRGFS+ F+I+P+ Sbjct: 44 LRDRLKSSRGSRFRLIEDELKELN---QRKLSR-YVLDGIRGFSKDFIIHPE 91