BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021241
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245...   247   3e-63
ref|XP_002300156.1| predicted protein [Populus trichocarpa] gi|2...   237   4e-60
ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr...   234   2e-59
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]   232   1e-58
ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis tha...   229   7e-58

>ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245024 [Vitis vinifera]
           gi|296084189|emb|CBI24577.3| unnamed protein product
           [Vitis vinifera]
          Length = 296

 Score =  247 bits (631), Expect = 3e-63
 Identities = 115/216 (53%), Positives = 132/216 (61%)
 Frame = +2

Query: 56  EKTCSCGLGVCLVLTANTEKNRGRKFYRCPARQENGGCGFFEWCDNSSATPASNGAQGFA 235
           EK C CGLG CL+LT+NT+KN GRKFY+CP R+ENGGCGFF+WCDNSS    SN A G  
Sbjct: 92  EKPCPCGLGTCLILTSNTQKNPGRKFYKCPLREENGGCGFFQWCDNSSG--ISNDAFGAI 149

Query: 236 PKASQYSASNTTQYSASNAPQYSTPISSFPDVPCPCGAGLCLILTARTEKNMGQQFYRCP 415
                                     SSFPD+ CPCGAG CLILTA+T  N GQQFYRCP
Sbjct: 150 NPGLN---------------------SSFPDLKCPCGAGSCLILTAKTGNNAGQQFYRCP 188

Query: 416 VNQETSCGFFKWCNERNSTAGFQXXXXXXXXXXXXXXXXXYGESRGNSCFKCGQDGHWSR 595
            NQ  SCGFFKWCN++   AG                   YG   G+SCFKCG++GHW++
Sbjct: 189 ANQGGSCGFFKWCNDQTVPAGLPVGASRGYNTTTNASIKSYGAQSGSSCFKCGKEGHWAK 248

Query: 596 DCPESASSSSFDVGGKSASSGTCYKCGMTGHWARDC 703
           DC   +     D GG+ ASSGTCYKCG  GHWARDC
Sbjct: 249 DCQMPSPEPLADSGGRPASSGTCYKCGKPGHWARDC 284



 Score =  131 bits (329), Expect = 3e-28
 Identities = 92/292 (31%), Positives = 124/292 (42%), Gaps = 38/292 (13%)
 Frame = +2

Query: 77  LGVCLVLTANTEKNRGRKFYRCPARQENGGCGFFEWCDNSSATPASNGAQGFAPKASQYS 256
           L     + AN   N+ R+ Y   A +E    G +        T A  G+   A K S  +
Sbjct: 17  LSAVAAVEANALSNKRRRTYTSDAAKE----GIY--------TAALRGSNSLAWKQSATA 64

Query: 257 ASNTTQYSASNAPQYSTPI----SSFPDVPCPCGAGLCLILTARTEKNMGQQFYRCPVNQ 424
           AS       S++   S       SS P+ PCPCG G CLILT+ T+KN G++FY+CP+ +
Sbjct: 65  ASGAPSSRGSSSVSSSGKSDGGDSSPPEKPCPCGLGTCLILTSNTQKNPGRKFYKCPLRE 124

Query: 425 ET-SCGFFKWCNERNS-------------TAGFQXXXXXXXXXXXXXXXXXYGESRGNSC 562
           E   CGFF+WC+  +               + F                   G + G   
Sbjct: 125 ENGGCGFFQWCDNSSGISNDAFGAINPGLNSSFPDLKCPCGAGSCLILTAKTGNNAGQQF 184

Query: 563 FKC--GQDG-----HWSRD------CPESAS-----SSSFDVGGKSASSG-TCYKCGMTG 685
           ++C   Q G      W  D       P  AS     +++  +    A SG +C+KCG  G
Sbjct: 185 YRCPANQGGSCGFFKWCNDQTVPAGLPVGASRGYNTTTNASIKSYGAQSGSSCFKCGKEG 244

Query: 686 HWARDCPKPXXXXXXXXXXXXXXXXTCYKCGKSGHWARDC-PGEDRKVGQWR 838
           HWA+DC  P                TCYKCGK GHWARDC   +D KV Q R
Sbjct: 245 HWAKDCQMPSPEPLADSGGRPASSGTCYKCGKPGHWARDCSSSQDTKVWQRR 296


>ref|XP_002300156.1| predicted protein [Populus trichocarpa] gi|222847414|gb|EEE84961.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  237 bits (604), Expect = 4e-60
 Identities = 112/216 (51%), Positives = 132/216 (61%)
 Frame = +2

Query: 56  EKTCSCGLGVCLVLTANTEKNRGRKFYRCPARQENGGCGFFEWCDNSSATPASNGAQGFA 235
           EK C CGLGVC V TANTE+NRGR FY+CP RQE+GGCGFF+WCD S   PA+N   GF 
Sbjct: 163 EKVCPCGLGVCNVFTANTERNRGRDFYKCPQRQESGGCGFFQWCDES---PAANNGGGFG 219

Query: 236 PKASQYSASNTTQYSASNAPQYSTPISSFPDVPCPCGAGLCLILTARTEKNMGQQFYRCP 415
              S  S SN                S FP++ C CGAG CLILT+R   N G+QFY+CP
Sbjct: 220 GGGSHGSVSN----------------SVFPELQCSCGAGSCLILTSRKGDNNGKQFYKCP 263

Query: 416 VNQETSCGFFKWCNERNSTAGFQXXXXXXXXXXXXXXXXXYGESRGNSCFKCGQDGHWSR 595
            NQ   CGFFKWC++  ++AG Q                 +G   G+SCFKCG++GHW++
Sbjct: 264 ENQ-GGCGFFKWCDDNTASAGLQASAPKVYINMNDSSNKSFGARTGSSCFKCGKEGHWAK 322

Query: 596 DCPESASSSSFDVGGKSASSGTCYKCGMTGHWARDC 703
           DC  S S S    G  S SSGTCYKCG  GHWARDC
Sbjct: 323 DCGMSTSDSPATFGAGSGSSGTCYKCGKPGHWARDC 358



 Score =  115 bits (287), Expect = 3e-23
 Identities = 66/205 (32%), Positives = 86/205 (41%), Gaps = 38/205 (18%)
 Frame = +2

Query: 323 PDVPCPCGAGLCLILTARTEKNMGQQFYRCPVNQET-SCGFFKWCNERN----------- 466
           P+  CPCG G+C + TA TE+N G+ FY+CP  QE+  CGFF+WC+E             
Sbjct: 162 PEKVCPCGLGVCNVFTANTERNRGRDFYKCPQRQESGGCGFFQWCDESPAANNGGGFGGG 221

Query: 467 ------STAGFQXXXXXXXXXXXXXXXXXYGESRGNSCFKCGQDG------HWSRDCPES 610
                 S + F                   G++ G   +KC ++        W  D   S
Sbjct: 222 GSHGSVSNSVFPELQCSCGAGSCLILTSRKGDNNGKQFYKCPENQGGCGFFKWCDDNTAS 281

Query: 611 A--------------SSSSFDVGGKSASSGTCYKCGMTGHWARDCPKPXXXXXXXXXXXX 748
           A               SS+   G ++ SS  C+KCG  GHWA+DC               
Sbjct: 282 AGLQASAPKVYINMNDSSNKSFGARTGSS--CFKCGKEGHWAKDCGMSTSDSPATFGAGS 339

Query: 749 XXXXTCYKCGKSGHWARDCPGEDRK 823
               TCYKCGK GHWARDC     K
Sbjct: 340 GSSGTCYKCGKPGHWARDCTSSQYK 364


>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321433|gb|EFH51854.1| zinc knuckle family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score =  234 bits (598), Expect = 2e-59
 Identities = 115/259 (44%), Positives = 144/259 (55%), Gaps = 4/259 (1%)
 Frame = +2

Query: 41  EKMVDEKTCSCGLGVCLVLTANTEKNRGRKFYRCPARQENGGCGFFEWCDNSSATPASNG 220
           E+   EK+C CG+G+CLVLT+ T KN GRKFY+CP R+ENGGCGFF+WCD          
Sbjct: 87  EQDFPEKSCPCGVGLCLVLTSTTPKNPGRKFYKCPNREENGGCGFFQWCD---------- 136

Query: 221 AQGFAPKASQYSASNTTQYSASNAPQYSTPISSFPDVPCPCGAGLCLILTARTEKNMGQQ 400
                  A Q S + T  Y  +N        S FPD  CPCGAGLC +LTA+T +N+G+Q
Sbjct: 137 -------AVQSSGTTTHSYGNTND-------SKFPDHQCPCGAGLCRVLTAKTGENVGRQ 182

Query: 401 FYRCPVNQETSCGFFKWCNERNSTAGFQXXXXXXXXXXXXXXXXXYGESRGNSCFKCGQD 580
           FYRCPV  E SCGFFKWCN+   ++                         G  C+KCG++
Sbjct: 183 FYRCPV-FEGSCGFFKWCNDNAVSSPTSYSVTKNSNLGDSDTRGYQTAKTGAPCYKCGKE 241

Query: 581 GHWSRDCPESASSSSFDVG--GKSASSGTCYKCGMTGHWARDC--PKPXXXXXXXXXXXX 748
           GHW+RDC   + + +++ G    S+SSG CYKCG  GHWA+DC                 
Sbjct: 242 GHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGHWAKDCTGQSGDPQFQSRQAKST 301

Query: 749 XXXXTCYKCGKSGHWARDC 805
                CYKCGK GHWARDC
Sbjct: 302 TSGGDCYKCGKPGHWARDC 320


>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
          Length = 369

 Score =  232 bits (592), Expect = 1e-58
 Identities = 113/262 (43%), Positives = 146/262 (55%), Gaps = 4/262 (1%)
 Frame = +2

Query: 41  EKMVDEKTCSCGLGVCLVLTANTEKNRGRKFYRCPARQENGGCGFFEWCDNSSATPASNG 220
           E+   EK+C CG+G+CL+LT+NT+KN GRKFY+CP R+ENGGCGFF+WCD          
Sbjct: 84  EQEFPEKSCPCGVGLCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCD---------- 133

Query: 221 AQGFAPKASQYSASNTTQYSASNAPQYSTPISSFPDVPCPCGAGLCLILTARTEKNMGQQ 400
                   +  S+  T  Y  +N        S FPD  CPCGAGLC +LTA+T +N+G+Q
Sbjct: 134 --------AVQSSGTTHSYGNTND-------SKFPDHQCPCGAGLCRVLTAKTGENVGRQ 178

Query: 401 FYRCPVNQETSCGFFKWCNERNSTAGFQXXXXXXXXXXXXXXXXXYGESRGNSCFKCGQD 580
           FYRCPV  E SCGFFKWCN+   +A                         G  C+KCG++
Sbjct: 179 FYRCPV-FEGSCGFFKWCNDDAVSAPTSYSVTKNSNLGDSDTRGYQIAKTGTPCYKCGKE 237

Query: 581 GHWSRDCPESASSSSFDVG--GKSASSGTCYKCGMTGHWARDCPKPXXXXXXXXXXXXXX 754
           GHW+RDC   +     ++G    ++++G CYKCG  GHWARDC                 
Sbjct: 238 GHWARDCTLQSPIPPSEMGPVRSTSAAGECYKCGKQGHWARDCTAQSGNPTYEPGKVKSS 297

Query: 755 XXT--CYKCGKSGHWARDCPGE 814
             +  CYKCGK GHWARDC G+
Sbjct: 298 SSSGECYKCGKQGHWARDCTGQ 319


>ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
           gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis
           thaliana] gi|17529084|gb|AAL38752.1| unknown protein
           [Arabidopsis thaliana] gi|22136980|gb|AAM91719.1|
           unknown protein [Arabidopsis thaliana]
           gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle
           protein [Arabidopsis thaliana]
          Length = 372

 Score =  229 bits (585), Expect = 7e-58
 Identities = 112/260 (43%), Positives = 146/260 (56%), Gaps = 2/260 (0%)
 Frame = +2

Query: 41  EKMVDEKTCSCGLGVCLVLTANTEKNRGRKFYRCPARQENGGCGFFEWCDNSSATPASNG 220
           E+   EK+C CG+G+CL+LT+NT KN GRKFY+CP R+ENGGCGFF+WCD          
Sbjct: 88  EQDFPEKSCPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCD---------- 137

Query: 221 AQGFAPKASQYSASNTTQYSASNAPQYSTPISSFPDVPCPCGAGLCLILTARTEKNMGQQ 400
               A ++S  S + +  Y   N        + FPD  CPCGAGLC +LTA+T +N+G+Q
Sbjct: 138 ----AVQSSGTSTTTSNSYGNGND-------TKFPDHQCPCGAGLCRVLTAKTGENVGRQ 186

Query: 401 FYRCPVNQETSCGFFKWCNERNSTAGFQXXXXXXXXXXXXXXXXXYGESRGNSCFKCGQD 580
           FYRCPV  E SCGFFKWCN+   ++                         G  C+KCG++
Sbjct: 187 FYRCPV-FEGSCGFFKWCNDNVVSSPTSYSVTKNSNFGDSDTRGYQNAKTGTPCYKCGKE 245

Query: 581 GHWSRDCPESASSSSFDVGGKSASSGTCYKCGMTGHWARDCPKPXXXXXXXXXXXXXXXX 760
           GHW+RDC  +  S +  V   SA +G C+KCG  GHW+RDC                   
Sbjct: 246 GHWARDC--TVQSDTGPVKSTSA-AGDCFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSS 302

Query: 761 T--CYKCGKSGHWARDCPGE 814
           +  CYKCGK GHW+RDC G+
Sbjct: 303 SGECYKCGKQGHWSRDCTGQ 322



 Score =  119 bits (299), Expect = 1e-24
 Identities = 72/219 (32%), Positives = 96/219 (43%), Gaps = 3/219 (1%)
 Frame = +2

Query: 65  CSCGLGVCLVLTANTEKNRGRKFYRCPARQENGGCGFFEWC-DNSSATPASNGAQGFAPK 241
           C CG G+C VLTA T +N GR+FYRCP  +  G CGFF+WC DN  ++P S         
Sbjct: 165 CPCGAGLCRVLTAKTGENVGRQFYRCPVFE--GSCGFFKWCNDNVVSSPTS--------- 213

Query: 242 ASQYSASNTTQYSASNAPQYSTPISSFPDVPCPCGAGLCLILTARTEKNMGQQFYRCPVN 421
              YS +  + +  S+   Y    +  P   C          T +++          PV 
Sbjct: 214 ---YSVTKNSNFGDSDTRGYQNAKTGTPCYKCGKEGHWARDCTVQSDTG--------PVK 262

Query: 422 QETSCGFFKWCNERNSTAGFQXXXXXXXXXXXXXXXXXYGESRGNSCFKCGQDGHWSRDC 601
             ++ G    C +      +                     S    C+KCG+ GHWSRDC
Sbjct: 263 STSAAGD---CFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDC 319

Query: 602 PESASSSSFDVG-GKSASS-GTCYKCGMTGHWARDCPKP 712
              +S+  F  G  KS SS G CYKCG  GHW+RDC  P
Sbjct: 320 TGQSSNQQFQSGQAKSTSSTGDCYKCGKAGHWSRDCTSP 358