BLASTX nr result
ID: Cimicifuga21_contig00021216
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021216 (263 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|2... 126 2e-27 ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 124 8e-27 ref|XP_002526570.1| brca1 associated ring domain, putative [Rici... 124 8e-27 ref|NP_001148056.1| ATBRCA1 [Zea mays] gi|195615546|gb|ACG29603.... 121 7e-26 tpg|DAA36947.1| TPA: ATBRCA1 [Zea mays] 120 9e-26 >ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|222844846|gb|EEE82393.1| predicted protein [Populus trichocarpa] Length = 380 Score = 126 bits (316), Expect = 2e-27 Identities = 57/87 (65%), Positives = 68/87 (78%) Frame = +1 Query: 1 HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180 HVIAATD GA RTLK LM ILNG+W+L+IDW+KACMESM PV+EE YE+ +D HGS++ Sbjct: 199 HVIAATDSDGACTRTLKYLMAILNGKWVLTIDWIKACMESMHPVDEENYEIILDCHGSRD 258 Query: 181 GPKKGRLRIMEKAPNLFNGLHFCFCAD 261 GPK GRL + AP LF+GL FCF D Sbjct: 259 GPKNGRLSALNNAPKLFSGLSFCFVGD 285 >ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine max] Length = 678 Score = 124 bits (311), Expect = 8e-27 Identities = 57/87 (65%), Positives = 65/87 (74%) Frame = +1 Query: 1 HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180 HVIAATD GA RTLKVLM ILNGRW+L +DW+KACME ++PV EEPYE+N+D G Q Sbjct: 493 HVIAATDAHGACSRTLKVLMAILNGRWVLKMDWIKACMEEVNPVEEEPYEINLDNQGCQG 552 Query: 181 GPKKGRLRIMEKAPNLFNGLHFCFCAD 261 GPK GRLR + P LFNGL F F D Sbjct: 553 GPKAGRLRALANEPKLFNGLKFYFSGD 579 >ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis] gi|223534131|gb|EEF35848.1| brca1 associated ring domain, putative [Ricinus communis] Length = 744 Score = 124 bits (311), Expect = 8e-27 Identities = 56/87 (64%), Positives = 70/87 (80%) Frame = +1 Query: 1 HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180 HVIAATD KGA RTLKVLM ILNGRW+L+IDW+KACM SM V+EEPYE+++D HG + Sbjct: 547 HVIAATDTKGACTRTLKVLMAILNGRWVLTIDWVKACMRSMHYVDEEPYEVSLDNHGCHS 606 Query: 181 GPKKGRLRIMEKAPNLFNGLHFCFCAD 261 GP+ GRL +++ AP LF+GL+F F D Sbjct: 607 GPRTGRLSVLDNAPKLFSGLNFYFAGD 633 >ref|NP_001148056.1| ATBRCA1 [Zea mays] gi|195615546|gb|ACG29603.1| ATBRCA1 [Zea mays] Length = 633 Score = 121 bits (303), Expect = 7e-26 Identities = 55/84 (65%), Positives = 68/84 (80%) Frame = +1 Query: 1 HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180 HVIA TDE+GA RTLKVLM IL G+WIL+++WLKACME+ +PV EEPYE+ D+HGS + Sbjct: 454 HVIANTDERGACARTLKVLMAILAGKWILNVNWLKACMEAREPVPEEPYEIRCDVHGSVD 513 Query: 181 GPKKGRLRIMEKAPNLFNGLHFCF 252 GP+ GRLR M++AP LF GL F F Sbjct: 514 GPRSGRLRAMQQAPGLFAGLTFYF 537 >tpg|DAA36947.1| TPA: ATBRCA1 [Zea mays] Length = 631 Score = 120 bits (302), Expect = 9e-26 Identities = 54/84 (64%), Positives = 68/84 (80%) Frame = +1 Query: 1 HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180 HVIA TDE+GA RTLKVLM IL G+W+L+++WLKACME+ +PV EEPYE+ D+HGS + Sbjct: 452 HVIANTDERGACARTLKVLMAILAGKWVLNVNWLKACMEAREPVPEEPYEIRCDVHGSVD 511 Query: 181 GPKKGRLRIMEKAPNLFNGLHFCF 252 GP+ GRLR M++AP LF GL F F Sbjct: 512 GPRSGRLRAMQQAPGLFAGLTFYF 535