BLASTX nr result

ID: Cimicifuga21_contig00021216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021216
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   124   8e-27
ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...   124   8e-27
ref|NP_001148056.1| ATBRCA1 [Zea mays] gi|195615546|gb|ACG29603....   121   7e-26
tpg|DAA36947.1| TPA: ATBRCA1 [Zea mays]                               120   9e-26

>ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|222844846|gb|EEE82393.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/87 (65%), Positives = 68/87 (78%)
 Frame = +1

Query: 1   HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180
           HVIAATD  GA  RTLK LM ILNG+W+L+IDW+KACMESM PV+EE YE+ +D HGS++
Sbjct: 199 HVIAATDSDGACTRTLKYLMAILNGKWVLTIDWIKACMESMHPVDEENYEIILDCHGSRD 258

Query: 181 GPKKGRLRIMEKAPNLFNGLHFCFCAD 261
           GPK GRL  +  AP LF+GL FCF  D
Sbjct: 259 GPKNGRLSALNNAPKLFSGLSFCFVGD 285


>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
           max]
          Length = 678

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/87 (65%), Positives = 65/87 (74%)
 Frame = +1

Query: 1   HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180
           HVIAATD  GA  RTLKVLM ILNGRW+L +DW+KACME ++PV EEPYE+N+D  G Q 
Sbjct: 493 HVIAATDAHGACSRTLKVLMAILNGRWVLKMDWIKACMEEVNPVEEEPYEINLDNQGCQG 552

Query: 181 GPKKGRLRIMEKAPNLFNGLHFCFCAD 261
           GPK GRLR +   P LFNGL F F  D
Sbjct: 553 GPKAGRLRALANEPKLFNGLKFYFSGD 579


>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223534131|gb|EEF35848.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 744

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/87 (64%), Positives = 70/87 (80%)
 Frame = +1

Query: 1   HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180
           HVIAATD KGA  RTLKVLM ILNGRW+L+IDW+KACM SM  V+EEPYE+++D HG  +
Sbjct: 547 HVIAATDTKGACTRTLKVLMAILNGRWVLTIDWVKACMRSMHYVDEEPYEVSLDNHGCHS 606

Query: 181 GPKKGRLRIMEKAPNLFNGLHFCFCAD 261
           GP+ GRL +++ AP LF+GL+F F  D
Sbjct: 607 GPRTGRLSVLDNAPKLFSGLNFYFAGD 633


>ref|NP_001148056.1| ATBRCA1 [Zea mays] gi|195615546|gb|ACG29603.1| ATBRCA1 [Zea mays]
          Length = 633

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/84 (65%), Positives = 68/84 (80%)
 Frame = +1

Query: 1   HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180
           HVIA TDE+GA  RTLKVLM IL G+WIL+++WLKACME+ +PV EEPYE+  D+HGS +
Sbjct: 454 HVIANTDERGACARTLKVLMAILAGKWILNVNWLKACMEAREPVPEEPYEIRCDVHGSVD 513

Query: 181 GPKKGRLRIMEKAPNLFNGLHFCF 252
           GP+ GRLR M++AP LF GL F F
Sbjct: 514 GPRSGRLRAMQQAPGLFAGLTFYF 537


>tpg|DAA36947.1| TPA: ATBRCA1 [Zea mays]
          Length = 631

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = +1

Query: 1   HVIAATDEKGAFCRTLKVLMGILNGRWILSIDWLKACMESMDPVNEEPYELNIDIHGSQN 180
           HVIA TDE+GA  RTLKVLM IL G+W+L+++WLKACME+ +PV EEPYE+  D+HGS +
Sbjct: 452 HVIANTDERGACARTLKVLMAILAGKWVLNVNWLKACMEAREPVPEEPYEIRCDVHGSVD 511

Query: 181 GPKKGRLRIMEKAPNLFNGLHFCF 252
           GP+ GRLR M++AP LF GL F F
Sbjct: 512 GPRSGRLRAMQQAPGLFAGLTFYF 535


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