BLASTX nr result

ID: Cimicifuga21_contig00021192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021192
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323240.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
gb|ABK93994.1| unknown [Populus trichocarpa]                          106   2e-21
ref|XP_002517315.1| 2,4-dienoyl-CoA reductase, putative [Ricinus...   105   4e-21
gb|AAK29646.1|AF349916_1 putative short-chain type alcohol dehyd...   105   5e-21
gb|AAN32641.1|AF416732_1 putative short-chain type alcohol dehyd...   103   1e-20

>ref|XP_002323240.1| predicted protein [Populus trichocarpa] gi|222867870|gb|EEF05001.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
 Frame = +1

Query: 1   LDLAKAGCKIIAAARRIDRLKSLCQEINQCS------SQTEESGCSVRAVAIVLDVNAQG 162
           LDLAKAGC+I+AAARR+DRLKSLC EINQ S      S T E     RAVA+ LDV+A G
Sbjct: 35  LDLAKAGCRILAAARRVDRLKSLCDEINQMSLSFPTSSSTAEVDIQPRAVAVELDVSADG 94

Query: 163 KVIQASVEKAWNAFGRIDALVNNAGVR 243
             I   V+KAW+AFG IDALVNNAGVR
Sbjct: 95  NTIDKCVQKAWDAFGGIDALVNNAGVR 121


>gb|ABK93994.1| unknown [Populus trichocarpa]
          Length = 290

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
 Frame = +1

Query: 1   LDLAKAGCKIIAAARRIDRLKSLCQEINQCS------SQTEESGCSVRAVAIVLDVNAQG 162
           LDLAKAGC+I+AAARR+DRLKSLC EINQ S      S T E     RAVA+ LDV+A G
Sbjct: 35  LDLAKAGCRILAAARRVDRLKSLCDEINQMSLSFPTSSSTAEVDIQPRAVAVELDVSADG 94

Query: 163 KVIQASVEKAWNAFGRIDALVNNAGVR 243
             I   V+KAW+AFG IDALVNNAGVR
Sbjct: 95  NTIDKCVQKAWDAFGGIDALVNNAGVR 121


>ref|XP_002517315.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
           gi|223543578|gb|EEF45108.1| 2,4-dienoyl-CoA reductase,
           putative [Ricinus communis]
          Length = 285

 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/81 (71%), Positives = 62/81 (76%)
 Frame = +1

Query: 1   LDLAKAGCKIIAAARRIDRLKSLCQEINQCSSQTEESGCSVRAVAIVLDVNAQGKVIQAS 180
           LDLAKAGCKI+AAARRIDRLKSLC EINQ  +     G   RAVAI LDV A G  I  S
Sbjct: 39  LDLAKAGCKILAAARRIDRLKSLCDEINQLPNTP---GAGPRAVAIELDVCADGPTIDKS 95

Query: 181 VEKAWNAFGRIDALVNNAGVR 243
           V+ AW+AFGRIDALVNNAGVR
Sbjct: 96  VQIAWDAFGRIDALVNNAGVR 116


>gb|AAK29646.1|AF349916_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]
          Length = 283

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/80 (66%), Positives = 65/80 (81%)
 Frame = +1

Query: 4   DLAKAGCKIIAAARRIDRLKSLCQEINQCSSQTEESGCSVRAVAIVLDVNAQGKVIQASV 183
           DL+KAGC+IIAAARRIDRL+SLC EIN  SS + +    +RAVAI LDV+A G  I+A+V
Sbjct: 38  DLSKAGCRIIAAARRIDRLQSLCDEINSNSSNSSQD---LRAVAIELDVSANGSAIEAAV 94

Query: 184 EKAWNAFGRIDALVNNAGVR 243
           +KAW+ FGRID LVNNAG+R
Sbjct: 95  QKAWDVFGRIDGLVNNAGIR 114


>gb|AAN32641.1|AF416732_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]
          Length = 290

 Score =  103 bits (258), Expect = 1e-20
 Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
 Frame = +1

Query: 4   DLAKAGCKIIAAARRIDRLKSLCQEIN----QCSSQTEESGCSVRAVAIVLDVNAQGKVI 171
           DL+KAGC+IIAAARRIDRLKSLC EIN    +   ++  S   +RAVAI LDV+A G  I
Sbjct: 38  DLSKAGCRIIAAARRIDRLKSLCDEINGIKLEFLIESTISSQELRAVAIELDVSANGASI 97

Query: 172 QASVEKAWNAFGRIDALVNNAGVR 243
           +A+V+KAWNAFGRID LVNNAG+R
Sbjct: 98  EAAVQKAWNAFGRIDVLVNNAGIR 121


Top