BLASTX nr result

ID: Cimicifuga21_contig00021134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021134
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...    74   2e-11
emb|CBI22055.3| unnamed protein product [Vitis vinifera]               74   2e-11
emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]    72   7e-11
ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm...    64   2e-08

>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2
           protein-like [Vitis vinifera]
          Length = 1069

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 52/148 (35%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
 Frame = +1

Query: 187 DQMISILAEAGCTXXXXXXXXXXXXXXHKFRQSLHHLFST--NPSRLSQFLSGFTSFIQK 360
           D+M+S+LA+AGCT              H FR+ LH LFS+  N S  S FLSGF+ ++Q 
Sbjct: 64  DKMVSLLADAGCTLFHPSGPPCLPSNPHNFRRHLHRLFSSSSNASIRSAFLSGFSFYVQS 123

Query: 361 TPKNFQTFLXXXXXXXXXXXXRESXXXXXXXXXXXXXXXXXXXXXXXPEYFD-------- 516
           + +N    L             ES                       PEYFD        
Sbjct: 124 S-QNLHRVLLPSNRDGLGPATCESLVRHLLLVPPIQLDLQNMLLEKLPEYFDINPEYFGR 182

Query: 517 -----NDIAGQIVNHFRYLDFLVDSKAF 585
                 D+A  IVNHFR+LDFLVDS AF
Sbjct: 183 SSSLDEDVARLIVNHFRWLDFLVDSYAF 210


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 52/148 (35%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
 Frame = +1

Query: 187 DQMISILAEAGCTXXXXXXXXXXXXXXHKFRQSLHHLFST--NPSRLSQFLSGFTSFIQK 360
           D+M+S+LA+AGCT              H FR+ LH LFS+  N S  S FLSGF+ ++Q 
Sbjct: 64  DKMVSLLADAGCTLFHPSGPPCLPSNPHNFRRHLHRLFSSSSNASIRSAFLSGFSFYVQS 123

Query: 361 TPKNFQTFLXXXXXXXXXXXXRESXXXXXXXXXXXXXXXXXXXXXXXPEYFD-------- 516
           + +N    L             ES                       PEYFD        
Sbjct: 124 S-QNLHRVLLPSNRDGLGPATCESLVRHLLLVPPIQLDLQNMLLEKLPEYFDINPEYFGR 182

Query: 517 -----NDIAGQIVNHFRYLDFLVDSKAF 585
                 D+A  IVNHFR+LDFLVDS AF
Sbjct: 183 SSSLDEDVARLIVNHFRWLDFLVDSYAF 210


>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 51/146 (34%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
 Frame = +1

Query: 193 MISILAEAGCTXXXXXXXXXXXXXXHKFRQSLHHLFST--NPSRLSQFLSGFTSFIQKTP 366
           M+S+LA+AGCT              H FR+ LH LFS+  N S  S FLSGF+ ++Q + 
Sbjct: 1   MVSLLADAGCTLFHPSGPPCLPSNPHNFRRHLHRLFSSSSNASJRSAFLSGFSFYVQSS- 59

Query: 367 KNFQTFLXXXXXXXXXXXXRESXXXXXXXXXXXXXXXXXXXXXXXPEYFD---------- 516
           +N    L             ES                       PEYFD          
Sbjct: 60  QNLHRVLLPSNRDGLGPATXESLVRHLLLVPPIQLDLQNMLLEKLPEYFDINPEYXGRSS 119

Query: 517 ---NDIAGQIVNHFRYLDFLVDSKAF 585
               D+A  IVNHFR+LDFLVDS AF
Sbjct: 120 SLDEDVARLIVNHFRWLDFLVDSYAF 145


>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
           predicted protein [Populus trichocarpa]
          Length = 1476

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 48/149 (32%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
 Frame = +1

Query: 187 DQMISILAEAGCTXXXXXXXXXXXXXXHKFRQSLHHLFS---TNPSRLSQFLSGFTSFIQ 357
           D+++SILA+AGCT              HKFR  L+ LFS   T P+  S FLSGF+S+I 
Sbjct: 60  DKLVSILADAGCTLINPSGPPCLPSDHHKFRNHLNRLFSSSDTAPALRSDFLSGFSSYI- 118

Query: 358 KTPKNFQTFLXXXXXXXXXXXXRESXXXXXXXXXXXXXXXXXXXXXXXPEYFD------- 516
               NF+  L             ES                       PEYFD       
Sbjct: 119 NLQHNFRRVLAFSKRDGFGAKRSESLVRQLLLVPAIQLDLQIMLLEKLPEYFDTNSVDSR 178

Query: 517 ------NDIAGQIVNHFRYLDFLVDSKAF 585
                 +D+A  I++ FR+LDF+VD   F
Sbjct: 179 TTLSLEDDVARLIIDQFRWLDFVVDPNTF 207


>ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis]
           gi|223538184|gb|EEF39794.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1188

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
 Frame = +1

Query: 187 DQMISILAEAGCTXXXXXXXXXXXXXXHKFRQSLHHLFST--NPSRL-SQFLSGFTSFIQ 357
           D+M+SILA+AGCT               K R  LH LFS+  N S L S FL+GF+++I 
Sbjct: 56  DKMVSILADAGCTLVNPSGPPCLPSDPLKLRSHLHRLFSSSDNVSALRSIFLTGFSAYIN 115

Query: 358 KTPKNFQTFLXXXXXXXXXXXXRESXXXXXXXXXXXXXXXXXXXXXXXPEYF-------- 513
            +PKN Q  L             ES                       PE+F        
Sbjct: 116 -SPKNLQRVLVSSNQYGS----NESLLRQLLLVPPIQLDLQMLLLEKLPEFFSLGPECSL 170

Query: 514 DNDIAGQIVNHFRYLDFLVDSKAF 585
           ++D+A  I+N FR+LDF+VDS AF
Sbjct: 171 EDDVARLIINQFRWLDFIVDSNAF 194


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