BLASTX nr result

ID: Cimicifuga21_contig00021131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021131
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281967.1| PREDICTED: probable lipoate-protein ligase A...   298   1e-78
ref|XP_002531849.1| lipoate-protein ligase, putative [Ricinus co...   297   2e-78
ref|XP_002323867.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
ref|NP_189543.2| biotin/lipoate A/B protein ligase family protei...   283   3e-74
ref|XP_002875485.1| predicted protein [Arabidopsis lyrata subsp....   283   4e-74

>ref|XP_002281967.1| PREDICTED: probable lipoate-protein ligase A [Vitis vinifera]
           gi|297733965|emb|CBI15212.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  298 bits (763), Expect = 1e-78
 Identities = 137/207 (66%), Positives = 175/207 (84%), Gaps = 1/207 (0%)
 Frame = +3

Query: 3   GTDAPTIVMGMSGVPAELVELGSVIQDQVPVIRRFTGGGTVIVDPGTIFVTFICNKDDLP 182
           G + PTIVMG+SG PA+L++L SV+ D++PVIRR+TGGGTV+VD GT+FVTFICNKD +P
Sbjct: 48  GANDPTIVMGISGKPAQLLKLDSVLNDRIPVIRRYTGGGTVVVDCGTVFVTFICNKDAVP 107

Query: 183 GIQPYPRPIMNWSSILYKEVFSGIGDFHLRENDYVLGDRKFGGNAQAITKNRWVHHTSFL 362
           G+QPYP+PIM+WSS+LY  VF G GDF LRENDY  G+ KFGGNAQ+ITKNRW+HHTSFL
Sbjct: 108 GLQPYPQPIMSWSSLLYALVFRGFGDFSLRENDYAFGNHKFGGNAQSITKNRWIHHTSFL 167

Query: 363 WNYDVRNMAYLKLPSRAPEYRSARDHADFVCRMKDHMSRSNFTERTFEALGSYFSVRHLQ 542
           W+Y+ RNMAYLKLP+RAPEYR ARDH +F+CRMKD+M RS F +RT +A+ ++FSVR ++
Sbjct: 168 WDYEARNMAYLKLPARAPEYRVARDHLEFICRMKDYMPRSVFVDRTIKAVETHFSVRPVE 227

Query: 543 LKTIDTP-NTPFTPSTKLLSREELSAA 620
           L+ ++T  N+ F  STKLL+ +EL AA
Sbjct: 228 LEAMETNLNSKFPHSTKLLTEQELEAA 254


>ref|XP_002531849.1| lipoate-protein ligase, putative [Ricinus communis]
           gi|223528499|gb|EEF30527.1| lipoate-protein ligase,
           putative [Ricinus communis]
          Length = 267

 Score =  297 bits (761), Expect = 2e-78
 Identities = 136/208 (65%), Positives = 173/208 (83%), Gaps = 1/208 (0%)
 Frame = +3

Query: 3   GTDAPTIVMGMSGVPAELVELGSVIQDQVPVIRRFTGGGTVIVDPGTIFVTFICNKDDLP 182
           GT+ P IVMG+SG P+EL+E+  V++D +PVIRRFTGGGTVIVD GT+FVT ICNKDD+P
Sbjct: 49  GTNVPNIVMGISGKPSELLEIEPVLRDHIPVIRRFTGGGTVIVDSGTVFVTLICNKDDVP 108

Query: 183 GIQPYPRPIMNWSSILYKEVFSGIGDFHLRENDYVLGDRKFGGNAQAITKNRWVHHTSFL 362
           G+QPYPR IM+WS +LY EVF GIGDF LRENDYV GD+KFGGNAQ+I K RW+HHTSFL
Sbjct: 109 GVQPYPRSIMSWSGLLYNEVFQGIGDFQLRENDYVFGDKKFGGNAQSIIKRRWIHHTSFL 168

Query: 363 WNYDVRNMAYLKLPSRAPEYRSARDHADFVCRMKDHMSRSNFTERTFEALGSYFSVRHLQ 542
           W+Y+V+NMAYLKLP+RAP+YRS R+H +FVCRMK++ SR+ F ERT +AL ++FSV  + 
Sbjct: 169 WDYEVKNMAYLKLPARAPKYRSTRNHTEFVCRMKEYFSRTVFIERTLKALQTHFSVEPIN 228

Query: 543 LKTIDTPN-TPFTPSTKLLSREELSAAF 623
           L+ +   + T F PSTKLL+++EL  A+
Sbjct: 229 LEGLGASHETGFVPSTKLLTKQELEDAW 256


>ref|XP_002323867.1| predicted protein [Populus trichocarpa] gi|222866869|gb|EEF04000.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  294 bits (753), Expect = 2e-77
 Identities = 137/210 (65%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
 Frame = +3

Query: 3   GTDAPTIVMGMSGVPAELVELGSVIQDQVPVIRRFTGGGTVIVDPGTIFVTFICNKDDLP 182
           GT+ P+IVMG+SG  +EL+ELG V++D+VPVIRRFTGGGTVIVD GTIFVT ICNKDD+P
Sbjct: 49  GTNTPSIVMGLSGKASELLELGFVLRDEVPVIRRFTGGGTVIVDHGTIFVTLICNKDDVP 108

Query: 183 GIQPYPRPIMNWSSILYKEVFSGIGDFHLRENDYVLGDRKFGGNAQAITKNRWVHHTSFL 362
           G+QPYPR IM+WS +LY +V  GIGDF LRENDYV GDRKFGGNAQ+ITKNRW+HHTSFL
Sbjct: 109 GVQPYPRSIMSWSGLLYGQVLRGIGDFQLRENDYVFGDRKFGGNAQSITKNRWIHHTSFL 168

Query: 363 WNYDVRNMAYLKLPSRAPEYRSARDHADFVCRMKDHMSRSNFTERTFEALGSYFSVRHLQ 542
           W+Y+V+NMAYLKLP+RAPEYRSARDH++F+CR+K+++ RS F E+T +AL ++FS++ + 
Sbjct: 169 WDYEVKNMAYLKLPARAPEYRSARDHSEFICRVKEYLPRSLFVEKTTKALETHFSLQPVN 228

Query: 543 LKTIDTPNT-PFTPSTKLLSREELSAAFRS 629
            +TI   +   F  +T LL+++EL  A  S
Sbjct: 229 SETIGAVHEGGFVHTTSLLTKQELKDALAS 258


>ref|NP_189543.2| biotin/lipoate A/B protein ligase family protein [Arabidopsis
           thaliana] gi|7939551|dbj|BAA95754.1| lipoate protein
           ligase-like protein [Arabidopsis thaliana]
           gi|332643999|gb|AEE77520.1| biotin/lipoate A/B protein
           ligase family protein [Arabidopsis thaliana]
          Length = 262

 Score =  283 bits (725), Expect = 3e-74
 Identities = 129/207 (62%), Positives = 166/207 (80%), Gaps = 1/207 (0%)
 Frame = +3

Query: 3   GTDAPTIVMGMSGVPAELVELGSVIQDQVPVIRRFTGGGTVIVDPGTIFVTFICNKDDLP 182
           GT+ PTIVMGMSG P++L+E+G V++D++PVI+RFTGGGTVIVD  T+FV+ ICNKDD+P
Sbjct: 48  GTNVPTIVMGMSGKPSQLLEVGPVMEDRIPVIKRFTGGGTVIVDKSTLFVSLICNKDDVP 107

Query: 183 GIQPYPRPIMNWSSILYKEVFSGIGDFHLRENDYVLGDRKFGGNAQAITKNRWVHHTSFL 362
            +QPYPR +M WS  LY EVF  +  F LRENDYV GDRKFGGNAQ+I KNRW+HHTSFL
Sbjct: 108 NVQPYPRSVMAWSGSLYDEVFKSVNGFQLRENDYVFGDRKFGGNAQSIIKNRWIHHTSFL 167

Query: 363 WNYDVRNMAYLKLPSRAPEYRSARDHADFVCRMKDHMSRSNFTERTFEALGSYFSVRHLQ 542
           W+YDVRNMAYLKLPSR P+YR  RDH DFVCRMKD++ RS+F E+T +A+ + F+++ + 
Sbjct: 168 WDYDVRNMAYLKLPSRVPQYRLERDHTDFVCRMKDYIERSDFVEKTVKAVRNQFTLKQVN 227

Query: 543 LKTIDT-PNTPFTPSTKLLSREELSAA 620
           L+ ID+     +  +T+LL+ EEL  A
Sbjct: 228 LEDIDSYAKGGYLKTTRLLTMEELEEA 254


>ref|XP_002875485.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321323|gb|EFH51744.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  283 bits (724), Expect = 4e-74
 Identities = 129/212 (60%), Positives = 167/212 (78%), Gaps = 1/212 (0%)
 Frame = +3

Query: 3   GTDAPTIVMGMSGVPAELVELGSVIQDQVPVIRRFTGGGTVIVDPGTIFVTFICNKDDLP 182
           GT+ PTIVMGMSG P +L+E+  V++D++PVI+RFTGGGTVIVD  T+FV+ ICNKDD+P
Sbjct: 48  GTNVPTIVMGMSGKPCQLIEVRPVMEDRIPVIKRFTGGGTVIVDKSTLFVSLICNKDDVP 107

Query: 183 GIQPYPRPIMNWSSILYKEVFSGIGDFHLRENDYVLGDRKFGGNAQAITKNRWVHHTSFL 362
            +QPYPR +M WS  LY EVF G+  F LRENDYV GDRKFGGNAQ+I K+RW+HHTSFL
Sbjct: 108 NVQPYPRSVMAWSGSLYGEVFKGVNGFQLRENDYVFGDRKFGGNAQSIIKSRWIHHTSFL 167

Query: 363 WNYDVRNMAYLKLPSRAPEYRSARDHADFVCRMKDHMSRSNFTERTFEALGSYFSVRHLQ 542
           W+YDVRNMAYLKLPSR P+YR  RDH +FVCRMKD++ RS+F E+T +A+G+ F+++ + 
Sbjct: 168 WDYDVRNMAYLKLPSRVPQYRLERDHTEFVCRMKDYIERSDFIEKTVKAVGNQFTLKQVN 227

Query: 543 LKTIDT-PNTPFTPSTKLLSREELSAAFRSQT 635
           L+ ID+     +  +T+LL+ EEL  A    T
Sbjct: 228 LEDIDSYAKGGYLKTTRLLTMEELEEAMAGTT 259


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