BLASTX nr result
ID: Cimicifuga21_contig00021114
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021114 (470 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319467.1| global transcription factor group [Populus t... 122 2e-26 ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [... 122 4e-26 emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera] 122 4e-26 ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu... 119 3e-25 ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [... 118 6e-25 >ref|XP_002319467.1| global transcription factor group [Populus trichocarpa] gi|222857843|gb|EEE95390.1| global transcription factor group [Populus trichocarpa] Length = 1053 Score = 122 bits (307), Expect = 2e-26 Identities = 57/73 (78%), Positives = 59/73 (80%) Frame = +3 Query: 3 DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182 DGIKEWL+TTDLKYYESRLNLNW+PILKTITDDPEKFIEDGGWEFLNME Sbjct: 909 DGIKEWLNTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEVSDSDSENSAD 968 Query: 183 XXQGYAPSDVQSD 221 QGY PSDVQSD Sbjct: 969 SDQGYMPSDVQSD 981 >ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera] Length = 1071 Score = 122 bits (305), Expect = 4e-26 Identities = 56/73 (76%), Positives = 59/73 (80%) Frame = +3 Query: 3 DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182 DGIKEWLDTTDLKYYESRLNLNW+PILKTIT+DPEKFIEDGGWEFLN+E Sbjct: 909 DGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQE 968 Query: 183 XXQGYAPSDVQSD 221 QGY PSDVQSD Sbjct: 969 SDQGYEPSDVQSD 981 >emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera] Length = 1019 Score = 122 bits (305), Expect = 4e-26 Identities = 56/73 (76%), Positives = 59/73 (80%) Frame = +3 Query: 3 DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182 DGIKEWLDTTDLKYYESRLNLNW+PILKTIT+DPEKFIEDGGWEFLN+E Sbjct: 857 DGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQE 916 Query: 183 XXQGYAPSDVQSD 221 QGY PSDVQSD Sbjct: 917 SDQGYEPSDVQSD 929 >ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis] gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16, putative [Ricinus communis] Length = 1098 Score = 119 bits (297), Expect = 3e-25 Identities = 55/73 (75%), Positives = 57/73 (78%) Frame = +3 Query: 3 DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182 D IKEWL+TTDLKYYESRLNLNW+PILKTITDDPEKFIEDGGWEFLNME Sbjct: 906 DSIKEWLNTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEVSDSDSENSAD 965 Query: 183 XXQGYAPSDVQSD 221 GY PSDVQSD Sbjct: 966 SDHGYVPSDVQSD 978 >ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera] Length = 1083 Score = 118 bits (295), Expect = 6e-25 Identities = 54/73 (73%), Positives = 58/73 (79%) Frame = +3 Query: 3 DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182 DGIKEWLDTTD+KYYESRLNLNW+ ILKTITDDP+ FI+DGGWEFLNMEA Sbjct: 904 DGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFLNMEASDSDSEHSEE 963 Query: 183 XXQGYAPSDVQSD 221 QGY PSDVQSD Sbjct: 964 SDQGYEPSDVQSD 976