BLASTX nr result

ID: Cimicifuga21_contig00021114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021114
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319467.1| global transcription factor group [Populus t...   122   2e-26
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   122   4e-26
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   122   4e-26
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   119   3e-25
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   118   6e-25

>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
            gi|222857843|gb|EEE95390.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1053

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/73 (78%), Positives = 59/73 (80%)
 Frame = +3

Query: 3    DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182
            DGIKEWL+TTDLKYYESRLNLNW+PILKTITDDPEKFIEDGGWEFLNME           
Sbjct: 909  DGIKEWLNTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEVSDSDSENSAD 968

Query: 183  XXQGYAPSDVQSD 221
              QGY PSDVQSD
Sbjct: 969  SDQGYMPSDVQSD 981


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/73 (76%), Positives = 59/73 (80%)
 Frame = +3

Query: 3    DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182
            DGIKEWLDTTDLKYYESRLNLNW+PILKTIT+DPEKFIEDGGWEFLN+E           
Sbjct: 909  DGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQE 968

Query: 183  XXQGYAPSDVQSD 221
              QGY PSDVQSD
Sbjct: 969  SDQGYEPSDVQSD 981


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/73 (76%), Positives = 59/73 (80%)
 Frame = +3

Query: 3    DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182
            DGIKEWLDTTDLKYYESRLNLNW+PILKTIT+DPEKFIEDGGWEFLN+E           
Sbjct: 857  DGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQE 916

Query: 183  XXQGYAPSDVQSD 221
              QGY PSDVQSD
Sbjct: 917  SDQGYEPSDVQSD 929


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/73 (75%), Positives = 57/73 (78%)
 Frame = +3

Query: 3    DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182
            D IKEWL+TTDLKYYESRLNLNW+PILKTITDDPEKFIEDGGWEFLNME           
Sbjct: 906  DSIKEWLNTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEVSDSDSENSAD 965

Query: 183  XXQGYAPSDVQSD 221
               GY PSDVQSD
Sbjct: 966  SDHGYVPSDVQSD 978


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/73 (73%), Positives = 58/73 (79%)
 Frame = +3

Query: 3    DGIKEWLDTTDLKYYESRLNLNWKPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXX 182
            DGIKEWLDTTD+KYYESRLNLNW+ ILKTITDDP+ FI+DGGWEFLNMEA          
Sbjct: 904  DGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFLNMEASDSDSEHSEE 963

Query: 183  XXQGYAPSDVQSD 221
              QGY PSDVQSD
Sbjct: 964  SDQGYEPSDVQSD 976


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