BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021046
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    86   4e-15
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    78   9e-13

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = -3

Query: 261 SLHFQVTQYSHILPLFSSSLQNQVSNFDFLSTYQKLHFSSKPNSIVELVETNNWSEDLEK 82
           SL +QVTQ S   P FS+  Q+  S F ++  Y KL FSSKPNSIVELV  N+WS++LE 
Sbjct: 27  SLCYQVTQSSRFSPSFSN--QSYTSAFPYI-LYGKLFFSSKPNSIVELVLENDWSDELES 83

Query: 81  ELEKSNPTLTHECVLYVLKRLDRNPQK 1
           ELEKS+  LTHE V+YVLK+LD++PQ+
Sbjct: 84  ELEKSSSVLTHETVIYVLKKLDKDPQR 110


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/82 (48%), Positives = 60/82 (73%)
 Frame = -3

Query: 246 VTQYSHILPLFSSSLQNQVSNFDFLSTYQKLHFSSKPNSIVELVETNNWSEDLEKELEKS 67
           +TQ +H  P F S   +  S  D+++ ++KL+ SSKP+S+VEL+  N+WS +LE +LE S
Sbjct: 29  LTQVTHFFPCFLSREHSYTS--DYVNIHKKLYSSSKPSSLVELLSVNDWSPELETQLENS 86

Query: 66  NPTLTHECVLYVLKRLDRNPQK 1
           +P LTHE V+YVLK+LD++P K
Sbjct: 87  SPLLTHETVIYVLKKLDKDPHK 108


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/88 (50%), Positives = 60/88 (68%)
 Frame = -3

Query: 264 RSLHFQVTQYSHILPLFSSSLQNQVSNFDFLSTYQKLHFSSKPNSIVELVETNNWSEDLE 85
           RSL     Q +H      S L +   +F   + +Q L+FSSKPNSIVELV T++WS+ LE
Sbjct: 26  RSLLLTRNQVTHFSLCTPSPLLDNSHHFLLPNIHQNLYFSSKPNSIVELVLTSDWSKGLE 85

Query: 84  KELEKSNPTLTHECVLYVLKRLDRNPQK 1
           +ELEK  P++THE V+YVLKR++ NP+K
Sbjct: 86  QELEKCYPSMTHETVVYVLKRMEANPEK 113


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/88 (54%), Positives = 60/88 (68%)
 Frame = -3

Query: 264 RSLHFQVTQYSHILPLFSSSLQNQVSNFDFLSTYQKLHFSSKPNSIVELVETNNWSEDLE 85
           RS + QVT++S   P    S Q+ VS+F     +  L FSS P S+++LV TN+WSE LE
Sbjct: 21  RSRYPQVTRFS---PSSYVSHQSLVSHFTI--NHPVLFFSSNPQSLLQLVSTNDWSEMLE 75

Query: 84  KELEKSNPTLTHECVLYVLKRLDRNPQK 1
            ELE  NPTLTHE V+YVLKRLD+ PQK
Sbjct: 76  TELETLNPTLTHETVVYVLKRLDKQPQK 103


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
 Frame = -3

Query: 249 QVTQYS--HILPLFSSSLQNQVSNFDFLSTYQKLHFSSKP--NSIVELVETNNWSEDLEK 82
           QVT +S  + LPLF  S      +  F  T+ KL+FS+KP  NSIVEL+ TN+WS+ LE 
Sbjct: 28  QVTHFSLHNPLPLFDRS-----HHLRFPITHHKLYFSTKPKPNSIVELLLTNDWSQALEL 82

Query: 81  ELEKSNPTLTHECVLYVLKRLDRNPQK 1
           +LE   P++ HE VLYV+KRLD+NP+K
Sbjct: 83  KLENRFPSMPHETVLYVIKRLDKNPEK 109