BLASTX nr result
ID: Cimicifuga21_contig00021037
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021037 (663 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK93704.1| unknown [Populus trichocarpa] 234 9e-60 ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG3... 232 4e-59 gb|ABR26216.1| vacuolar protein sorting 55 containing protein [O... 231 7e-59 gb|ACF83201.1| unknown [Zea mays] 230 2e-58 ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp.... 229 5e-58 >gb|ABK93704.1| unknown [Populus trichocarpa] Length = 126 Score = 234 bits (598), Expect = 9e-60 Identities = 111/126 (88%), Positives = 119/126 (94%) Frame = -1 Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439 M MT+ VLAGLAFMFS+SILLQILACAIYNNWWPM+S LMYVLVPMPCLFFGGGST FLT Sbjct: 1 MAMTVEVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLT 60 Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259 SRDGGGWIDAAKFLTGASAVGSIAIP IL+HA++IETGAM+IEFTSF I VCTV+CFHRA Sbjct: 61 SRDGGGWIDAAKFLTGASAVGSIAIPIILRHAHMIETGAMWIEFTSFVIFVCTVMCFHRA 120 Query: 258 SLEDEW 241 SLEDEW Sbjct: 121 SLEDEW 126 >ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG31000.1| vacuolar protein sorting 55 containing protein [Zea mays] gi|195622332|gb|ACG32996.1| vacuolar protein sorting 55 containing protein [Zea mays] Length = 126 Score = 232 bits (592), Expect = 4e-59 Identities = 107/126 (84%), Positives = 121/126 (96%) Frame = -1 Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439 M MT+ VLA LAFMFS+SILLQILACA+YNNWWPM++ LMYVLVPMPCLFFGGGSTHFLT Sbjct: 1 MAMTVEVLAALAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60 Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259 SR+GGGWI+AAKFLTGASA+GS+AIPAIL+HA LIETGAMFIEFTSFFILVCTVLCFHRA Sbjct: 61 SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120 Query: 258 SLEDEW 241 +L+++W Sbjct: 121 TLDEDW 126 >gb|ABR26216.1| vacuolar protein sorting 55 containing protein [Oryza sativa Indica Group] Length = 126 Score = 231 bits (590), Expect = 7e-59 Identities = 107/126 (84%), Positives = 120/126 (95%) Frame = -1 Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439 M MT+ VLAGLAFMFS+SILLQILACA+YNNWWPM++ LMYVLVPMPCLFFGGGST FLT Sbjct: 1 MAMTVEVLAGLAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTQFLT 60 Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259 SRDGGGW +AAKFLTGASA+GSIAIPAIL+HA LIETGAMFIEFTSFFILVCTV+CFHRA Sbjct: 61 SRDGGGWFNAAKFLTGASAMGSIAIPAILRHAGLIETGAMFIEFTSFFILVCTVMCFHRA 120 Query: 258 SLEDEW 241 +L+++W Sbjct: 121 TLDEDW 126 >gb|ACF83201.1| unknown [Zea mays] Length = 126 Score = 230 bits (587), Expect = 2e-58 Identities = 106/126 (84%), Positives = 121/126 (96%) Frame = -1 Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439 M MT+ VLA LAFMFS+SILLQILACA+Y+NWWPM++ LMYVLVPMPCLFFGGGSTHFLT Sbjct: 1 MAMTVEVLAALAFMFSTSILLQILACALYSNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60 Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259 SR+GGGWI+AAKFLTGASA+GS+AIPAIL+HA LIETGAMFIEFTSFFILVCTVLCFHRA Sbjct: 61 SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120 Query: 258 SLEDEW 241 +L+++W Sbjct: 121 TLDEDW 126 >ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330691|gb|EFH61110.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 126 Score = 229 bits (583), Expect = 5e-58 Identities = 106/126 (84%), Positives = 116/126 (92%) Frame = -1 Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439 M MTI VLAGLAFMFSSSILLQILACAIY NWWPM+S LMYV+VPMPC+FFGGGST FLT Sbjct: 1 MAMTIEVLAGLAFMFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLT 60 Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259 SRDGGGWIDAAKFLTGAS VGS+AIP IL+HA +IETGAM IEFTSFFI +CTV+CFHRA Sbjct: 61 SRDGGGWIDAAKFLTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRA 120 Query: 258 SLEDEW 241 SL+D+W Sbjct: 121 SLDDDW 126