BLASTX nr result

ID: Cimicifuga21_contig00021037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021037
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93704.1| unknown [Populus trichocarpa]                          234   9e-60
ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG3...   232   4e-59
gb|ABR26216.1| vacuolar protein sorting 55 containing protein [O...   231   7e-59
gb|ACF83201.1| unknown [Zea mays]                                     230   2e-58
ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp....   229   5e-58

>gb|ABK93704.1| unknown [Populus trichocarpa]
          Length = 126

 Score =  234 bits (598), Expect = 9e-60
 Identities = 111/126 (88%), Positives = 119/126 (94%)
 Frame = -1

Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439
           M MT+ VLAGLAFMFS+SILLQILACAIYNNWWPM+S LMYVLVPMPCLFFGGGST FLT
Sbjct: 1   MAMTVEVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLT 60

Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259
           SRDGGGWIDAAKFLTGASAVGSIAIP IL+HA++IETGAM+IEFTSF I VCTV+CFHRA
Sbjct: 61  SRDGGGWIDAAKFLTGASAVGSIAIPIILRHAHMIETGAMWIEFTSFVIFVCTVMCFHRA 120

Query: 258 SLEDEW 241
           SLEDEW
Sbjct: 121 SLEDEW 126


>ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG31000.1| vacuolar
           protein sorting 55 containing protein [Zea mays]
           gi|195622332|gb|ACG32996.1| vacuolar protein sorting 55
           containing protein [Zea mays]
          Length = 126

 Score =  232 bits (592), Expect = 4e-59
 Identities = 107/126 (84%), Positives = 121/126 (96%)
 Frame = -1

Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439
           M MT+ VLA LAFMFS+SILLQILACA+YNNWWPM++ LMYVLVPMPCLFFGGGSTHFLT
Sbjct: 1   MAMTVEVLAALAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60

Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259
           SR+GGGWI+AAKFLTGASA+GS+AIPAIL+HA LIETGAMFIEFTSFFILVCTVLCFHRA
Sbjct: 61  SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120

Query: 258 SLEDEW 241
           +L+++W
Sbjct: 121 TLDEDW 126


>gb|ABR26216.1| vacuolar protein sorting 55 containing protein [Oryza sativa Indica
           Group]
          Length = 126

 Score =  231 bits (590), Expect = 7e-59
 Identities = 107/126 (84%), Positives = 120/126 (95%)
 Frame = -1

Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439
           M MT+ VLAGLAFMFS+SILLQILACA+YNNWWPM++ LMYVLVPMPCLFFGGGST FLT
Sbjct: 1   MAMTVEVLAGLAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTQFLT 60

Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259
           SRDGGGW +AAKFLTGASA+GSIAIPAIL+HA LIETGAMFIEFTSFFILVCTV+CFHRA
Sbjct: 61  SRDGGGWFNAAKFLTGASAMGSIAIPAILRHAGLIETGAMFIEFTSFFILVCTVMCFHRA 120

Query: 258 SLEDEW 241
           +L+++W
Sbjct: 121 TLDEDW 126


>gb|ACF83201.1| unknown [Zea mays]
          Length = 126

 Score =  230 bits (587), Expect = 2e-58
 Identities = 106/126 (84%), Positives = 121/126 (96%)
 Frame = -1

Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439
           M MT+ VLA LAFMFS+SILLQILACA+Y+NWWPM++ LMYVLVPMPCLFFGGGSTHFLT
Sbjct: 1   MAMTVEVLAALAFMFSTSILLQILACALYSNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60

Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259
           SR+GGGWI+AAKFLTGASA+GS+AIPAIL+HA LIETGAMFIEFTSFFILVCTVLCFHRA
Sbjct: 61  SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120

Query: 258 SLEDEW 241
           +L+++W
Sbjct: 121 TLDEDW 126


>ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330691|gb|EFH61110.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score =  229 bits (583), Expect = 5e-58
 Identities = 106/126 (84%), Positives = 116/126 (92%)
 Frame = -1

Query: 618 MTMTIGVLAGLAFMFSSSILLQILACAIYNNWWPMISTLMYVLVPMPCLFFGGGSTHFLT 439
           M MTI VLAGLAFMFSSSILLQILACAIY NWWPM+S LMYV+VPMPC+FFGGGST FLT
Sbjct: 1   MAMTIEVLAGLAFMFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLT 60

Query: 438 SRDGGGWIDAAKFLTGASAVGSIAIPAILKHANLIETGAMFIEFTSFFILVCTVLCFHRA 259
           SRDGGGWIDAAKFLTGAS VGS+AIP IL+HA +IETGAM IEFTSFFI +CTV+CFHRA
Sbjct: 61  SRDGGGWIDAAKFLTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRA 120

Query: 258 SLEDEW 241
           SL+D+W
Sbjct: 121 SLDDDW 126


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