BLASTX nr result

ID: Cimicifuga21_contig00021025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021025
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...    77   2e-12
emb|CBI31410.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002315331.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002311988.1| hypothetical protein POPTRDRAFT_765239 [Popu...    69   5e-10
ref|XP_004150377.1| PREDICTED: uncharacterized protein LOC101208...    59   4e-07

>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/171 (32%), Positives = 71/171 (41%), Gaps = 32/171 (18%)
 Frame = +2

Query: 2    GFGNRGRGRRDQTGEW-NREKPNENNQSFGWNNGSNNDAGG----------GWGSQDSXX 148
            GFG RGRGRRDQ+G W NR    ENN+SF WN GSNN+  G          G G  D   
Sbjct: 2419 GFGGRGRGRRDQSGGWNNRNNSGENNKSFEWNKGSNNNGEGWKGHDGAVSWGQGGGDKGP 2478

Query: 149  XXXXXXXXXXXXXXXGWG-------SQDSGNKVTXXXXXXXXXXXXXXXSRE----ENQS 295
                           GW        S  +G++                 S E     +QS
Sbjct: 2479 RNWNSGTGGTSNQYGGWNQSKGVVESSGTGSQAGSWNKGASPAKDYGGSSVEASNLNSQS 2538

Query: 296  VGWSKG---------ANDQAGGW-GNHASGSKGTTGNNESWGGKQTDSWNQ 418
             GW+KG         +NDQ   W  ++ASG    +  N+S  G Q D+W++
Sbjct: 2539 SGWNKGSAQTSVAVVSNDQGNDWKQSNASGKGQWSAGNQSIAGAQADAWDK 2589


>emb|CBI31410.3| unnamed protein product [Vitis vinifera]
          Length = 1065

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/171 (32%), Positives = 71/171 (41%), Gaps = 32/171 (18%)
 Frame = +2

Query: 2    GFGNRGRGRRDQTGEW-NREKPNENNQSFGWNNGSNNDAGG----------GWGSQDSXX 148
            GFG RGRGRRDQ+G W NR    ENN+SF WN GSNN+  G          G G  D   
Sbjct: 771  GFGGRGRGRRDQSGGWNNRNNSGENNKSFEWNKGSNNNGEGWKGHDGAVSWGQGGGDKGP 830

Query: 149  XXXXXXXXXXXXXXXGWG-------SQDSGNKVTXXXXXXXXXXXXXXXSRE----ENQS 295
                           GW        S  +G++                 S E     +QS
Sbjct: 831  RNWNSGTGGTSNQYGGWNQSKGVVESSGTGSQAGSWNKGASPAKDYGGSSVEASNLNSQS 890

Query: 296  VGWSKG---------ANDQAGGW-GNHASGSKGTTGNNESWGGKQTDSWNQ 418
             GW+KG         +NDQ   W  ++ASG    +  N+S  G Q D+W++
Sbjct: 891  SGWNKGSAQTSVAVVSNDQGNDWKQSNASGKGQWSAGNQSIAGAQADAWDK 941


>ref|XP_002315331.1| predicted protein [Populus trichocarpa] gi|222864371|gb|EEF01502.1|
            predicted protein [Populus trichocarpa]
          Length = 1697

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 56/204 (27%), Positives = 72/204 (35%), Gaps = 59/204 (28%)
 Frame = +2

Query: 2    GFGNRGRGRRDQTGEWNREKPNENNQSFGWNNGSNNDAG--------------------- 118
            GFG RGRGRRDQ G W+ +  +  + +FGW NG+NN +G                     
Sbjct: 1387 GFGGRGRGRRDQNGGWS-DNGSAEDSTFGWKNGANNSSGGWKNNGGGSNWNQGGDDKGQH 1445

Query: 119  --------------GGWGSQDSXXXXXXXXXXXXXXXXXG-------------WGSQDSG 217
                          GGW SQDS                 G             WG    G
Sbjct: 1446 NSWNSGGGGTSNRAGGWSSQDSDWNQSRMAKDSCSNDLAGGWNKGTGANSDAAWG---QG 1502

Query: 218  NKVTXXXXXXXXXXXXXXXSREENQSVGWSKGAND--QAGGWGNHASGS--KGTTGNN-E 382
            N                     ++Q  GW+KG+       GWGN  +GS   GTTG + +
Sbjct: 1503 NSWKSSNSSGGDWNSNKEIKGSDDQGSGWNKGSGSCVPGDGWGNKGAGSGDAGTTGGDAK 1562

Query: 383  SW------GGKQTDSWNQSKAAGE 436
             W      GG Q+  W+QS    E
Sbjct: 1563 PWNQSSASGGGQSSGWSQSMEVKE 1586


>ref|XP_002311988.1| hypothetical protein POPTRDRAFT_765239 [Populus trichocarpa]
            gi|222851808|gb|EEE89355.1| hypothetical protein
            POPTRDRAFT_765239 [Populus trichocarpa]
          Length = 1853

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 53/182 (29%), Positives = 70/182 (38%), Gaps = 37/182 (20%)
 Frame = +2

Query: 2    GFGNRGRGRRDQTGEWNREKPNENNQSFGWNNGSNNDAGG------------GWGSQDSX 145
            GFG RGRGRRDQ G W+ +  +  +++F W NG+NN +GG            G G +   
Sbjct: 1484 GFGGRGRGRRDQNGGWS-DNNSAEDKTFDWKNGANNSSGGWKNNGGGSSWNRGGGDRGHQ 1542

Query: 146  XXXXXXXXXXXXXXXXGWGSQDSG-------------------NKVTXXXXXXXXXXXXX 268
                            GW SQ SG                   NK T             
Sbjct: 1543 QNSWNSGSGGTSNEGGGWSSQGSGWNQSRTAKDSGGSDLAGGWNKGTCANSDVAWGQGNS 1602

Query: 269  XXSREENQSVGWS------KGANDQAGGWGNHASGSKGTTGNNESWGGKQTDSWNQSKAA 430
              S   +   GWS      KG+ DQ GGW    SG+     ++ +WG  Q +SW  S  +
Sbjct: 1603 WKSSNPS-GEGWSKSSKEIKGSEDQGGGWNKGPSGA----NSDAAWG--QGNSWKSSNPS 1655

Query: 431  GE 436
            GE
Sbjct: 1656 GE 1657


>ref|XP_004150377.1| PREDICTED: uncharacterized protein LOC101208989 [Cucumis sativus]
          Length = 1690

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 46/155 (29%), Positives = 61/155 (39%), Gaps = 11/155 (7%)
 Frame = +2

Query: 2    GFGNRGRGRRDQTGEWNREKPNENNQSFGWNNGSNNDAGG-GWGSQDSXXXXXXXXXXXX 178
            GFG RGRGR      WN E  + + ++ GW+ G    +   GWGS               
Sbjct: 1148 GFGGRGRGR------WNSEGGSNDGENKGWSGGGGGGSDNKGWGSGGGGSDNKGWSSGGD 1201

Query: 179  XXXXXGW--GSQDSGNKVTXXXXXXXXXXXXXXXSREENQSVGWSKGANDQAG----GWG 340
                 GW  G + SGNK                 S   +   GWS G N   G    GWG
Sbjct: 1202 GSNNKGWSTGGEGSGNK------GGGDNKGWGSGSGGSSDDKGWSGGGNGVGGGDNKGWG 1255

Query: 341  NHASGS---KG-TTGNNESWGGKQTDSWNQSKAAG 433
            +   GS   KG + G+N+ WG     S N+  ++G
Sbjct: 1256 SGGGGSNDNKGWSGGDNKGWGSAGGSSDNKGWSSG 1290


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