BLASTX nr result

ID: Cimicifuga21_contig00021005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021005
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32286.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002270604.1| PREDICTED: SOSS complex subunit B homolog [V...   102   3e-20
emb|CAN67844.1| hypothetical protein VITISV_016667 [Vitis vinifera]   102   3e-20
ref|XP_004135609.1| PREDICTED: SOSS complex subunit B homolog [C...   102   4e-20
ref|XP_002520709.1| conserved hypothetical protein [Ricinus comm...    99   3e-19

>emb|CBI32286.3| unnamed protein product [Vitis vinifera]
          Length = 155

 Score =  102 bits (255), Expect = 3e-20
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = -3

Query: 342 IFSYDGNNFNKSFVLRAGKRGKAEKVGEFTMTFVETPNLSEIHWVTDPSNSKKQVQEAVL 163
           IFSY+ NN     VLRAGK+GKAEKVGEF M FVETPN+SEI W+ DPSN KK VQ+AV+
Sbjct: 89  IFSYNRNNL----VLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDPSNPKKYVQDAVI 144

Query: 162 SPYSRIFPPHP 130
           SP+S IFPP P
Sbjct: 145 SPHSHIFPPVP 155


>ref|XP_002270604.1| PREDICTED: SOSS complex subunit B homolog [Vitis vinifera]
          Length = 137

 Score =  102 bits (255), Expect = 3e-20
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = -3

Query: 342 IFSYDGNNFNKSFVLRAGKRGKAEKVGEFTMTFVETPNLSEIHWVTDPSNSKKQVQEAVL 163
           IFSY+ NN     VLRAGK+GKAEKVGEF M FVETPN+SEI W+ DPSN KK VQ+AV+
Sbjct: 71  IFSYNRNNL----VLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDPSNPKKYVQDAVI 126

Query: 162 SPYSRIFPPHP 130
           SP+S IFPP P
Sbjct: 127 SPHSHIFPPVP 137


>emb|CAN67844.1| hypothetical protein VITISV_016667 [Vitis vinifera]
          Length = 223

 Score =  102 bits (255), Expect = 3e-20
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = -3

Query: 342 IFSYDGNNFNKSFVLRAGKRGKAEKVGEFTMTFVETPNLSEIHWVTDPSNSKKQVQEAVL 163
           IFSY+ NN     VLRAGK+GKAEKVGEF M FVETPN+SEI W+ DPSN KK VQ+AV+
Sbjct: 157 IFSYNRNNL----VLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDPSNPKKYVQDAVI 212

Query: 162 SPYSRIFPPHP 130
           SP+S IFPP P
Sbjct: 213 SPHSHIFPPVP 223


>ref|XP_004135609.1| PREDICTED: SOSS complex subunit B homolog [Cucumis sativus]
           gi|449485696|ref|XP_004157248.1| PREDICTED: SOSS complex
           subunit B homolog [Cucumis sativus]
          Length = 139

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/69 (73%), Positives = 55/69 (79%)
 Frame = -3

Query: 342 IFSYDGNNFNKSFVLRAGKRGKAEKVGEFTMTFVETPNLSEIHWVTDPSNSKKQVQEAVL 163
           IFSY  NN   + VLRAGKRGK EKVGEF M FVETPN+SEIHWV D  NS K V+E+VL
Sbjct: 72  IFSYSRNN---NLVLRAGKRGKIEKVGEFKMVFVETPNMSEIHWVPDTINSNKYVKESVL 128

Query: 162 SPYSRIFPP 136
           SPYSRIFPP
Sbjct: 129 SPYSRIFPP 137


>ref|XP_002520709.1| conserved hypothetical protein [Ricinus communis]
           gi|223540094|gb|EEF41671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/68 (73%), Positives = 55/68 (80%)
 Frame = -3

Query: 342 IFSYDGNNFNKSFVLRAGKRGKAEKVGEFTMTFVETPNLSEIHWVTDPSNSKKQVQEAVL 163
           IFSY+ NN     VLRAGKRG  EKVGEFTM FVETPN+SEI WV DP+NSKK VQEAV+
Sbjct: 79  IFSYNRNNL----VLRAGKRGSIEKVGEFTMAFVETPNMSEIRWVPDPNNSKKYVQEAVI 134

Query: 162 SPYSRIFP 139
           S +SRIFP
Sbjct: 135 STHSRIFP 142


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