BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021001
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    68   1e-09
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    67   3e-09
ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncat...    64   2e-08
ref|XP_002532278.1| conserved hypothetical protein [Ricinus comm...    63   4e-08
ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ...    62   5e-08

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +2

Query: 299 IFGFGFHQATNEYKVIQIDCTLLYSRSQFQSHVTVYTLGTDLWRTLEDISYNISLLNNST 478
           ++GFG+  AT++YK++ I   +      F SHV +YT+ TD+W+TL  + Y +       
Sbjct: 142 VYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSMPYALCCARTMG 201

Query: 479 ALFNGALHWLAARP-GSFSFNVLVSFDIK 562
              +GALHW+  R     S +++V+FD++
Sbjct: 202 VFVSGALHWVVTRDLEPESRDLIVAFDLR 230


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
 Frame = +2

Query: 263 IPSRIPIQERSTIFGFGFHQATNEYKVIQIDCTLLYSRSQF------------QSHVTVY 406
           +P  +   ++  +FGFG+H  T  YKV+++    +Y R+ +            QS V V 
Sbjct: 156 LPKSLQYPDQEVVFGFGYHPMTEVYKVVKV----VYYRNGYGGFSRFRRITCSQSEVQVL 211

Query: 407 TLGTDLWRTLEDISYNISLLNNSTALFNGALHWLAARPGSFSFNVLVSFDIKD 565
           TLG+  WR+L  +SY +     S AL NG LHW+  RP  +    +VSFD+ D
Sbjct: 212 TLGSPTWRSLGKVSYQLDRW-PSEALVNGRLHWV-TRPRRYVTRFIVSFDLAD 262


>ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483135|gb|AES64338.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
 Frame = +2

Query: 275 IPIQERS-TIFGFGFHQATNEYKVIQIDC----TLLYSRSQFQSHVTVYTLGTDLWRTLE 439
           IP +E S TI+GFG+    + YKV+ ++C    T       +++ V VYTLGTD WR ++
Sbjct: 151 IPKREGSYTIYGFGYDHFNDTYKVVAVNCFESDTDSNGSKVYKTEVKVYTLGTDYWRRIQ 210

Query: 440 DISYNISLLNNSTALFNGALHWLAARPGSFSFNVLVSFDIKD 565
           D    +   +NS    +G ++WLAA+    S+ ++VS D+++
Sbjct: 211 DFPSGVP-FDNSGTFVSGTINWLAAKDPYTSW-IIVSLDLEE 250


>ref|XP_002532278.1| conserved hypothetical protein [Ricinus communis]
           gi|223528012|gb|EEF30093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
 Frame = +2

Query: 263 IPSRIPIQERSTIFGFGFHQATNEYKVIQIDCTLLY-----------SRSQF--QSHVTV 403
           +P  +   ++  +FGFGFH  T EYKV++I   + Y           +R QF  QS V +
Sbjct: 7   LPKSLKYPDQEVVFGFGFHPKTQEYKVVKI---VYYRNGHSGGYPRATRRQFYPQSEVQI 63

Query: 404 YTLGTDLWRTLEDISYNISLLNNSTALFNGALHWLAARPGSFS-FNVLVSFDIKD 565
            T+G+  WR+L  +SY + +   S AL NG LHW+ +RP  ++    LVS D+ D
Sbjct: 64  LTVGSCEWRSLGKMSYQL-VRRQSEALVNGRLHWV-SRPRRYNPARRLVSLDLVD 116


>ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago
           truncatula] gi|355504317|gb|AES85520.1| Nuclear
           transcription factor Y subunit A-7, partial [Medicago
           truncatula]
          Length = 455

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 27/89 (30%), Positives = 53/89 (59%)
 Frame = +2

Query: 296 TIFGFGFHQATNEYKVIQIDCTLLYSRSQFQSHVTVYTLGTDLWRTLEDISYNISLLNNS 475
           TI+GFG+    + YKV+ + C        +++ V V+TLGT+ WR + D+ + +   + S
Sbjct: 191 TIYGFGYDHVNDIYKVVAVYC-FESDNGDYKTQVKVHTLGTNFWRRIHDLPFGVP-FDES 248

Query: 476 TALFNGALHWLAARPGSFSFNVLVSFDIK 562
               +G ++WLA+   S++ +++VS D++
Sbjct: 249 GKFVSGTVNWLASNDSSYTSSIIVSLDLE 277