BLASTX nr result

ID: Cimicifuga21_contig00020369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020369
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]    68   7e-10
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    66   3e-09
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    65   6e-09
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    62   4e-08
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    59   5e-07

>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = +2

Query: 8   EIHLPSLTAFQSVPKDGHCDFT----YVHKAVLSANPL-SNTNYVVMAIHSEFKKLAFFK 172
           +I LP    F+  P D   D T    +++K VLS+ P  SN N V+MAIHS +KKLAF K
Sbjct: 122 QIDLPPAITFEDSPPD--LDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYKKLAFCK 179

Query: 173 SGDKVWTLLDSEELRPMEDVIYQGNKFYALHCYGHVFTCDV 295
            GDK W  L SE+++  +D++Y  + FYA+     V  CD+
Sbjct: 180 PGDKRWITLKSEDIQ-YKDLLYYKDNFYAIG-RSKVVQCDI 218


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
 Frame = +2

Query: 8   EIHLPSLTAFQSVPKDGHCDFT----YVHKAVLSANPL-SNTNYVVMAIHSEFKKLAFFK 172
           +I LP    F+  P D   D T    +++K VLS+ P  SN N V+MAIHS + KLAF K
Sbjct: 122 QIDLPPAITFEDSPPD--LDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYNKLAFCK 179

Query: 173 SGDKVWTLLDSEELRPMEDVIYQGNKFYALHCYGHVFTCDV 295
            GDK W  L SE+++  +D++Y  + FYA+     V  CD+
Sbjct: 180 PGDKRWITLKSEDIQ-YKDLLYYKDNFYAIG-RSKVVQCDI 218


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
 Frame = +2

Query: 8    EIHLPSL-------TAFQSVPKDGHCDFTYVHKAVLSANPLSNTNYVVMAIHSEFKKLAF 166
            +I LPSL       T   S  +       +++KAVLS+ P S+ +  VM I+S++ +LAF
Sbjct: 1033 QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP-SSPDCAVMIIYSDYGRLAF 1091

Query: 167  FKSGDKVWTLLDSEELRPMEDVIYQGNKFYALHCYGHVFTCDVNG 301
             K G + WTLL+SE   P++D+IY    F A++    V+ CD++G
Sbjct: 1092 TKPGHQTWTLLESES-GPVDDIIYFNGSFLAVNLSWEVWICDISG 1135


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/79 (36%), Positives = 52/79 (65%)
 Frame = +2

Query: 71  TYVHKAVLSANPLSNTNYVVMAIHSEFKKLAFFKSGDKVWTLLDSEELRPMEDVIYQGNK 250
           +++ K VLS++PL + N+VV+AI ++   LA+ ++GDK W+L+++      EDVI+    
Sbjct: 163 SFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENAR-SFCEDVIFVNGM 221

Query: 251 FYALHCYGHVFTCDVNGPS 307
           FYA++  G +  CD++  S
Sbjct: 222 FYAVNKAGQIVICDISSDS 240


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 19/116 (16%)
 Frame = +2

Query: 11  IHLPSLTAFQSVPKDGHCDFTY-VHKAVLSANPLSNTN-YVVMAIHSEFKKLAFFKSGDK 184
           I LP LT  + +P+     F Y +HK VLSANP SN + +V+M I+   K LAF KSGD+
Sbjct: 254 IRLPPLTRLK-IPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAFIKSGDQ 312

Query: 185 VWTLLDSEELRP---------------MEDVIYQGN--KFYALHCYGHVFTCDVNG 301
            W  +DS  ++                 EDVIYQ    +FYAL     V     +G
Sbjct: 313 NWAYIDSMVMKDDVLDSPYFLDLSLFGFEDVIYQERELQFYALSYDSQVLAIKTSG 368


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