BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020130
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...   161   2e-48
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...   148   9e-45
gb|ABK93461.1| unknown [Populus trichocarpa]                          148   9e-45
ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycin...   145   3e-43
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...   154   1e-42

>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score =  161 bits (407), Expect(3) = 2e-48
 Identities = 82/146 (56%), Positives = 100/146 (68%), Gaps = 2/146 (1%)
 Frame = +2

Query: 248 CLEIVWKDKCLKNSDELWQLMKSNKKLFPFLYKAYSHIRAKNWVVRSEIKYVVDFVAYRH 427
           CL+IV +D  LKN +ELWQ MKS ++ FP  Y AYSH+R KNWVVRS  +Y VDFVAYRH
Sbjct: 91  CLKIVGEDNHLKNDEELWQYMKSRRETFPDFYMAYSHLRIKNWVVRSGSQYGVDFVAYRH 150

Query: 428 HPSLVHSEYAVMV-SSGNGKINKSLMAWPSLHATIRLEDGVAKTLLVLHIKNNAYD-ISP 601
           HP+LVHSEYAV+V S  N   N  L  W     TIRL   VAKTLLV+HI  N +   +P
Sbjct: 151 HPALVHSEYAVLVLSEENENANGRLRVWSDFDCTIRLCGSVAKTLLVIHINKNGHGATTP 210

Query: 602 SCLEHCTVEGQTIARWNSDQCHEDHT 679
            CL+  +VE +TI RW+++QC E  T
Sbjct: 211 LCLKKYSVEERTITRWSAEQCREVQT 236



 Score = 45.1 bits (105), Expect(3) = 2e-48
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = +3

Query: 156 NQTCFERRTVTINKGRQHYELSLEEAFYLCHVL 254
           N++CF R  +T  K +Q ++LS+EEAFYLCH L
Sbjct: 57  NRSCFGRPVITAEKDKQWFQLSMEEAFYLCHSL 89



 Score = 33.9 bits (76), Expect(3) = 2e-48
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = +1

Query: 4  SEAFALANPMSRIVSKLQPSLVQSKACGFL 93
          +EA ALA PMS IVS+LQ SL +S + G L
Sbjct: 10 AEAKALAEPMSEIVSQLQSSLTRSDSQGLL 39


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  148 bits (374), Expect(3) = 9e-45
 Identities = 77/143 (53%), Positives = 97/143 (67%), Gaps = 1/143 (0%)
 Frame = +2

Query: 248 CLEIVWKDKCLKNSDELWQLMKSNKKLFPFLYKAYSHIRAKNWVVRSEIKYVVDFVAYRH 427
           CL+I  +D  +KN  +LW  MK  K+ FP  YKAYSH+R KNWV+R  ++Y VDFVAY+H
Sbjct: 91  CLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYKAYSHLRMKNWVLRPGLQYGVDFVAYQH 150

Query: 428 HPSLVHSEYAVMVSSGNGKINKSLMAWPSLHATIRLEDGVAKTLLVLHIKNNAYD-ISPS 604
           HPSLVHSEYAV+V S  G   + L  W   H TIRL   VAKTLL+L++  N +  ISPS
Sbjct: 151 HPSLVHSEYAVIVLS-EGDTGR-LRVWSDFHCTIRLCGSVAKTLLILNVDKNGHGAISPS 208

Query: 605 CLEHCTVEGQTIARWNSDQCHED 673
           CLE  +VE  TI RW+ +Q  +D
Sbjct: 209 CLERYSVEECTITRWSPEQSRDD 231



 Score = 40.0 bits (92), Expect(3) = 9e-45
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 90  SCVSYLDCXXXXXXXXXXXXXXNQTCFERRTVTINKGRQHYELSLEEAFYLCHVLR 257
           +C S   C               + CF +  +T  K +Q ++L LEEAFYLC+ L+
Sbjct: 35  ACASLSGCSVLLAVETEQTELLTRACFGKPIITAEKEKQWFQLGLEEAFYLCYSLK 90



 Score = 39.3 bits (90), Expect(3) = 9e-45
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +1

Query: 4  SEAFALANPMSRIVSKLQPSLVQSKACGFL 93
          +EA ALA+PMS IVS+LQ SL+QS AC  L
Sbjct: 10 AEAKALADPMSEIVSQLQSSLLQSNACASL 39


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  148 bits (374), Expect(3) = 9e-45
 Identities = 77/143 (53%), Positives = 97/143 (67%), Gaps = 1/143 (0%)
 Frame = +2

Query: 248 CLEIVWKDKCLKNSDELWQLMKSNKKLFPFLYKAYSHIRAKNWVVRSEIKYVVDFVAYRH 427
           CL+I  +D  +KN  +LW  MK  K+ FP  YKAYSH+R KNWV+R  ++Y VDFVAY+H
Sbjct: 91  CLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYKAYSHLRMKNWVLRPGLQYGVDFVAYQH 150

Query: 428 HPSLVHSEYAVMVSSGNGKINKSLMAWPSLHATIRLEDGVAKTLLVLHIKNNAYD-ISPS 604
           HPSLVHSEYAV+V S  G   + L  W   H TIRL   VAKTLL+L++  N +  ISPS
Sbjct: 151 HPSLVHSEYAVIVLS-EGDTGR-LRVWSDFHCTIRLCGSVAKTLLILNVDKNGHGAISPS 208

Query: 605 CLEHCTVEGQTIARWNSDQCHED 673
           CLE  +VE  TI RW+ +Q  +D
Sbjct: 209 CLERYSVEECTITRWSPEQSRDD 231



 Score = 40.0 bits (92), Expect(3) = 9e-45
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 90  SCVSYLDCXXXXXXXXXXXXXXNQTCFERRTVTINKGRQHYELSLEEAFYLCHVLR 257
           +C S   C               + CF +  +T  K +Q ++L LEEAFYLC+ L+
Sbjct: 35  ACASLSGCSVLLAVETEKTELLTRACFGKPIITAEKEKQWFQLGLEEAFYLCYSLK 90



 Score = 39.3 bits (90), Expect(3) = 9e-45
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +1

Query: 4  SEAFALANPMSRIVSKLQPSLVQSKACGFL 93
          +EA ALA+PMS IVS+LQ SL+QS AC  L
Sbjct: 10 AEAKALADPMSEIVSQLQSSLLQSNACASL 39


>ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycine max]
           gi|255634724|gb|ACU17724.1| unknown [Glycine max]
          Length = 255

 Score =  145 bits (366), Expect(3) = 3e-43
 Identities = 75/141 (53%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
 Frame = +2

Query: 269 DKCLKNSDELWQLMKSNKKLFPFLYKAYSHIRAKNWVVRSEIKYVVDFVAYRHHPSLVHS 448
           D   +NS+ELW  MKS K+ FP  YKAYSH+R KNWVVRS  +Y  DFV Y HHP+ VHS
Sbjct: 106 DTSPQNSEELWHYMKSKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYCHHPARVHS 165

Query: 449 EYAVMV-SSGNGK-INKSLMAWPSLHATIRLEDGVAKTLLVLHI-KNNAYDISPSCLEHC 619
           EY V+V S G  K +N  L  W  +H T RL  GVAK LLVL++ +N + + SP CL + 
Sbjct: 166 EYGVLVLSDGEDKDLNGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGSSNESPLCLANY 225

Query: 620 TVEGQTIARWNSDQCHEDHTI 682
           T+E  TI RWN +QC E   I
Sbjct: 226 TIEEHTITRWNPEQCREKMVI 246



 Score = 41.6 bits (96), Expect(3) = 3e-43
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +1

Query: 4   SEAFALANPMSRIVSKLQPSLVQSKACGFL 93
           ++A AL  PMS+IVS+LQ SLVQS  CGFL
Sbjct: 16  AQAEALKEPMSKIVSQLQSSLVQSNTCGFL 45



 Score = 35.8 bits (81), Expect(3) = 3e-43
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 156 NQTCFERRTVTINKGRQHYELSLEEAFYLCHVLR 257
           ++ CF     T+ K +  ++LS EEAFYLC+ L+
Sbjct: 63  DKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLK 96


>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score =  154 bits (388), Expect(3) = 1e-42
 Identities = 80/143 (55%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
 Frame = +2

Query: 248 CLEIVWKDKCLKNSDELWQLMKSNKKLFPFLYKAYSHIRAKNWVVRSEIKYVVDFVAYRH 427
           C++IV +D C  +  ELWQ MKS K  FP  YKAYSH+R KNWVVR   +Y VDFVAYRH
Sbjct: 91  CIKIVSEDNCCISDLELWQFMKSQKPTFPDFYKAYSHLRMKNWVVRPGSQYGVDFVAYRH 150

Query: 428 HPSLVHSEYAVMV-SSGNGKINKSLMAWPSLHATIRLEDGVAKTLLVLHIKNNAYDIS-P 601
           HPSLVHSEYAV+V S  +   N  L  W   H T+RL   VAKTLLVL I  N +  + P
Sbjct: 151 HPSLVHSEYAVLVLSEEDANANGRLRVWSDFHCTLRLCGSVAKTLLVLGINKNCHGTTLP 210

Query: 602 SCLEHCTVEGQTIARWNSDQCHE 670
           SCLE  +VE +T ARW+  Q  E
Sbjct: 211 SCLEKYSVEERTFARWSPQQSRE 233



 Score = 34.7 bits (78), Expect(3) = 1e-42
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 159 QTCFERRTVTINKGRQHYELSLEEAFYLCHVLR 257
           + CF R  +T  K +Q ++L +EEAFYL + L+
Sbjct: 58  RACFGRPMITSEKDKQWFQLGIEEAFYLSYSLK 90



 Score = 32.3 bits (72), Expect(3) = 1e-42
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +1

Query: 4  SEAFALANPMSRIVSKLQPSLVQSKACGFL 93
          SEA A A+PMS+I+S+L  SL+Q  A G L
Sbjct: 10 SEAKAAADPMSKIISQLCSSLIQFDAHGLL 39