BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019931
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   129   2e-28
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   124   1e-26
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   117   1e-24
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   117   1e-24
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...   116   3e-24

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  129 bits (325), Expect = 2e-28
 Identities = 78/164 (47%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
 Frame = -1

Query: 488 NIRKLVLEAVDRSSGGLEKLSIGGLNRTDELLHSIANKTSSLRYLRLVNCGEISMAALLE 309
           ++ ++   AVDRS G L  + I     TD LL+ I +++S +R+LRLV+C  IS   L E
Sbjct: 78  DLEEMARHAVDRSGGQLLSICIDDF-ATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLSE 136

Query: 308 VTKKIPLLEELELCYGLAKKEVIEAAGRSCKQLKSFRLNTMQRKYTYPIWSFRQQWF--D 135
             K++PLL E++LCY    KEV+EA G+ C +LKSFRLN            FR      D
Sbjct: 137 GIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQ---------GFRHPHIECD 187

Query: 134 EEVLAIAEHMPQLRRLHLFGNPMTNYGLEAILKACAHLEYLDLR 3
           EE LAIA++MP L+ L LFGN +TN GL AIL  C HLE LDLR
Sbjct: 188 EEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLR 231


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
 Frame = -1

Query: 464 AVDRSSGGLEKLSIGGLNRTDELLHSIANKTSSLRYLRLVNCGEISMAALLEVTKKIPLL 285
           AVDRS GGL ++ I     TDELL+ IA+++S+LR LRL+ C  I+    +E   K+PL+
Sbjct: 413 AVDRSQGGLVEIDIWYFG-TDELLNYIADRSSNLRTLRLIMCYPIADEGFIEAVVKLPLI 471

Query: 284 EELELCYGLAKKEVIEAAGRSCKQLKSFRLNTMQRKYTYPIWSFRQQWFD-EEVLAIAEH 108
           E LEL +     E ++  G+SC  LK+ +LN+       P   F    F+ EE LAIAE 
Sbjct: 472 EYLELSHCSLSGESLKVVGQSCPNLKTLKLNSE------PDPKFNDDEFNNEEALAIAES 525

Query: 107 MPQLRRLHLFGNPMTNYGLEAILKACAHLEYLDLR 3
           MP+LR L LFGN +TN GL AIL  C HLE+LDLR
Sbjct: 526 MPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLR 560



 Score =  114 bits (284), Expect = 1e-23
 Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 10/190 (5%)
 Frame = -1

Query: 542 PQLFRCICLQYSSI--LFLCNIRKLVLEAVDRSSGGLEKLSIGGLNRTDELLHSIANK-- 375
           P ++R I +  S    +F  ++  +   AVDRS GGL ++ I     TD+LL  IA++  
Sbjct: 47  PSMWRKIVIDNSGNRDIFKYDLDSMCRHAVDRSQGGLLEIDIEYFG-TDKLLDYIADRFS 105

Query: 374 ------TSSLRYLRLVNCGEISMAALLEVTKKIPLLEELELCYGLAKKEVIEAAGRSCKQ 213
                 +S+LR LRLV C +I+   + E   K+PLLE+LE+ Y     E +   G+SC  
Sbjct: 106 LSLFSISSNLRSLRLVRCHQITDKGVAEAVVKLPLLEDLEVSYCSFSGECLSVVGQSCPH 165

Query: 212 LKSFRLNTMQRKYTYPIWSFRQQWFDEEVLAIAEHMPQLRRLHLFGNPMTNYGLEAILKA 33
           L + +LN   R        F     D   +AIAE MP+LR L L GN +TN GL AIL +
Sbjct: 166 LTTLKLNRRPRV------EFVINMRDHNAIAIAESMPELRHLQLLGNALTNTGLNAILDS 219

Query: 32  CAHLEYLDLR 3
           C HL++LDLR
Sbjct: 220 CTHLDHLDLR 229


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  117 bits (293), Expect = 1e-24
 Identities = 70/165 (42%), Positives = 95/165 (57%)
 Frame = -1

Query: 497 FLCNIRKLVLEAVDRSSGGLEKLSIGGLNRTDELLHSIANKTSSLRYLRLVNCGEISMAA 318
           F  ++  +   AVDRS GGL ++ I     T++L+  IA+++S+L+ L LV C  I+   
Sbjct: 236 FKYDLESMCRHAVDRSHGGLIEIEIWYYG-TNDLIMYIADRSSNLKSLGLVRCFPITDEG 294

Query: 317 LLEVTKKIPLLEELELCYGLAKKEVIEAAGRSCKQLKSFRLNTMQRKYTYPIWSFRQQWF 138
           + +   K+PLLE LE+ Y L   E +   GRSC  LK+ +LN        P   F    F
Sbjct: 295 VAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRA------PEIMFSNSGF 348

Query: 137 DEEVLAIAEHMPQLRRLHLFGNPMTNYGLEAILKACAHLEYLDLR 3
           D+   AIAE MP+LR L L GN +TN GL AIL  C HLE+LDLR
Sbjct: 349 DDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLR 393



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/61 (54%), Positives = 40/61 (65%)
 Frame = -1

Query: 185 QRKYTYPIWSFRQQWFDEEVLAIAEHMPQLRRLHLFGNPMTNYGLEAILKACAHLEYLDL 6
           QR   + +W +     D+E LAIAE MP+LR L LFGN +TN  LEAIL  C HL +LDL
Sbjct: 8   QRNPRFKLWRY-----DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDL 62

Query: 5   R 3
           R
Sbjct: 63  R 63


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  117 bits (292), Expect = 1e-24
 Identities = 73/162 (45%), Positives = 96/162 (59%)
 Frame = -1

Query: 488 NIRKLVLEAVDRSSGGLEKLSIGGLNRTDELLHSIANKTSSLRYLRLVNCGEISMAALLE 309
           N+ +L  +AV RS G L   +I     TD+LL  I    + L  LRLV C  IS   L+E
Sbjct: 75  NLEELCRQAVKRSCGQLIHFNIEHFG-TDDLLLYITQSCNQLSRLRLVYCNRISDEGLVE 133

Query: 308 VTKKIPLLEELELCYGLAKKEVIEAAGRSCKQLKSFRLNTMQRKYTYPIWSFRQQWFDEE 129
              K+PLLE+LEL +     E +E  G++C  LKS +LN   R++      +R+   D+ 
Sbjct: 134 AVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLN---RQF------YRRVECDKG 184

Query: 128 VLAIAEHMPQLRRLHLFGNPMTNYGLEAILKACAHLEYLDLR 3
            LAIAE+MP LR LH+FGN +TN GLEAIL  C+ LE LDLR
Sbjct: 185 ALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLR 226


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  116 bits (290), Expect = 3e-24
 Identities = 69/162 (42%), Positives = 99/162 (61%)
 Frame = -1

Query: 488 NIRKLVLEAVDRSSGGLEKLSIGGLNRTDELLHSIANKTSSLRYLRLVNCGEISMAALLE 309
           N+  +   AVDRS GGL ++ I     TD LL+ IA+++S+LR LRL  C +I+   L+E
Sbjct: 76  NLDIMCRHAVDRSQGGLVEIDIWYFG-TDGLLNYIADRSSNLRSLRLTRCSQITDDGLVE 134

Query: 308 VTKKIPLLEELELCYGLAKKEVIEAAGRSCKQLKSFRLNTMQRKYTYPIWSFRQQWFDEE 129
              K+PLLE+LEL Y       ++  G+SC  +K  +L            S+ Q+  D++
Sbjct: 135 AVLKLPLLEDLELSYCSLSGVSLKVLGQSCPNMKILKLK-----------SYPQKENDDD 183

Query: 128 VLAIAEHMPQLRRLHLFGNPMTNYGLEAILKACAHLEYLDLR 3
            LAIAE MP+LR L LFGN +++ GL AIL +C +LE+LDLR
Sbjct: 184 ALAIAETMPKLRHLQLFGNGLSDTGLNAILDSCLNLEHLDLR 225