BLASTX nr result

ID: Cimicifuga21_contig00019915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019915
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...   149   3e-34
ref|XP_002530038.1| protein binding protein, putative [Ricinus c...   147   1e-33
ref|XP_002311762.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002887150.1| hypothetical protein ARALYDRAFT_475894 [Arab...   138   4e-31

>ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|222863634|gb|EEF00765.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  156 bits (394), Expect = 2e-36
 Identities = 84/132 (63%), Positives = 101/132 (76%), Gaps = 8/132 (6%)
 Frame = +2

Query: 47  MGLSHYPSAAEGMLPVLVMNTVISVAVLKSMVRWVLQ-VMGCVESAPDFEEE--EHHPQS 217
           MGLS +P AAEG+LPVLVMNTV+SVA+LKSMVR VLQ V+G   + PD+EEE  E+  ++
Sbjct: 1   MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLVVGANWTPPDYEEEPDEYRREN 60

Query: 218 LRKRKMSITLFKSL-----GKTVSPMECSVCLHGFEADEQVSELQQCKHFFHKGCLQKWL 382
            R+R++SIT FKSL     G   S MEC VCL GFEA+E+VSEL  CKHFFH+GCL KW 
Sbjct: 61  ARERRISITQFKSLNQNDGGARNSAMECCVCLCGFEAEEEVSEL-SCKHFFHRGCLDKWF 119

Query: 383 DHKHTTCPLCRS 418
           D+ H TCPLCRS
Sbjct: 120 DNIHATCPLCRS 131


>ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera]
           gi|296081356|emb|CBI16789.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  149 bits (375), Expect = 3e-34
 Identities = 80/137 (58%), Positives = 102/137 (74%), Gaps = 13/137 (9%)
 Frame = +2

Query: 47  MGLSHYPSAAEGMLPVLVMNTVISVAVLKSMVRWVLQVMGCVESAPDFEE----EEHHPQ 214
           MGLS++ S AEG+LPVLVMNTV+SVA+LK+MVR VLQVMG   S+P+ EE    EE+ P 
Sbjct: 1   MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSPM 60

Query: 215 S--LRKRKMSITLFKSLGKT-------VSPMECSVCLHGFEADEQVSELQQCKHFFHKGC 367
           S   ++R++S+T FKSL  +        S M+C VCL  FEA+E+VSEL  CKHFFHKGC
Sbjct: 61  SENAKERRVSVTQFKSLSHSSGTGTGWCSSMDCCVCLCRFEAEEEVSEL-SCKHFFHKGC 119

Query: 368 LQKWLDHKHTTCPLCRS 418
            +KW D+KH++CPLCRS
Sbjct: 120 WEKWFDNKHSSCPLCRS 136


>ref|XP_002530038.1| protein binding protein, putative [Ricinus communis]
           gi|223530454|gb|EEF32338.1| protein binding protein,
           putative [Ricinus communis]
          Length = 139

 Score =  147 bits (370), Expect = 1e-33
 Identities = 79/138 (57%), Positives = 97/138 (70%), Gaps = 14/138 (10%)
 Frame = +2

Query: 47  MGLSHYPSAAEGMLPVLVMNTVISVAVLKSMVRWVLQV-MGCVESAPDFEEEEHHPQ--- 214
           MGLS +PSAAEG+LPVLVMNTV+SVA+ K+ VR +LQV MG     P +  E+  P    
Sbjct: 1   MGLSSFPSAAEGVLPVLVMNTVLSVALFKNWVRALLQVVMGANYWVPQYYYEQDRPDVFS 60

Query: 215 ---SLRKRKMSITLFKSLGKTV-------SPMECSVCLHGFEADEQVSELQQCKHFFHKG 364
              + R+R++SIT FKS+G  +       S +EC VCL GFE DE+VSEL  CKHFFHKG
Sbjct: 61  QDNARRERRISITQFKSMGAAIGTSRSSSSTVECCVCLCGFEEDEEVSELS-CKHFFHKG 119

Query: 365 CLQKWLDHKHTTCPLCRS 418
           CL KW D+KH+TCPLCRS
Sbjct: 120 CLDKWFDNKHSTCPLCRS 137


>ref|XP_002311762.1| predicted protein [Populus trichocarpa] gi|222851582|gb|EEE89129.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  139 bits (350), Expect = 2e-31
 Identities = 78/135 (57%), Positives = 98/135 (72%), Gaps = 11/135 (8%)
 Frame = +2

Query: 47  MGLSHYPSAAEGMLPVLVMNTVISVAVLKSMVRWVLQVM-GCVESAPDFEEE-EHHPQ-S 217
           MGLS +P AA G+LP L+MNT++ VA+LK+ VR VLQVM G   + PD+EEE + HPQ +
Sbjct: 1   MGLSSFPGAA-GVLPELLMNTILLVALLKNTVRSVLQVMAGANWTPPDYEEEPDGHPQEN 59

Query: 218 LRKRKMSITLFKSLG--------KTVSPMECSVCLHGFEADEQVSELQQCKHFFHKGCLQ 373
            R+R+MSIT FKSL         +  + MEC VCL GF+A+E+VSEL  CKHFFH+GCL 
Sbjct: 60  ARERRMSITQFKSLQQNHDGTSYRVSTAMECCVCLCGFQAEEEVSELH-CKHFFHRGCLD 118

Query: 374 KWLDHKHTTCPLCRS 418
           KW D+K  TCPLCRS
Sbjct: 119 KWFDNKQATCPLCRS 133


>ref|XP_002887150.1| hypothetical protein ARALYDRAFT_475894 [Arabidopsis lyrata subsp.
           lyrata] gi|297332991|gb|EFH63409.1| hypothetical protein
           ARALYDRAFT_475894 [Arabidopsis lyrata subsp. lyrata]
          Length = 132

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/130 (52%), Positives = 91/130 (70%), Gaps = 6/130 (4%)
 Frame = +2

Query: 47  MGLSHYPSAAEGMLPVLVMNTVISVAVLKSMVRWVLQVMGC-VESAPDFEEEEHHPQSLR 223
           MGLSHYP+A+EG++P+LVMNTV+SV+V K+MVR VL ++      A + E+++ H  S R
Sbjct: 1   MGLSHYPTASEGVVPMLVMNTVVSVSVFKNMVRSVLNMVSSETNEAKNKEDDQAHEDSKR 60

Query: 224 KRKMSITLFKSLGKTVSP-----MECSVCLHGFEADEQVSELQQCKHFFHKGCLQKWLDH 388
           +R++S+T F S     S      MEC VCL GF+ +E+VSEL  CKH+FH  CL KW  +
Sbjct: 61  RRRISVTHFGSAENRGSKHEREAMECCVCLCGFKEEEEVSELVSCKHYFHTACLDKWFSN 120

Query: 389 KHTTCPLCRS 418
            HTTCPLCRS
Sbjct: 121 DHTTCPLCRS 130


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