BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019853
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   627   e-177
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              627   e-177
ref|XP_002309217.1| predicted protein [Populus trichocarpa] gi|2...   600   e-169
ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron sp...   578   e-162
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp...   573   e-161

>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  627 bits (1616), Expect = e-177
 Identities = 320/466 (68%), Positives = 388/466 (83%), Gaps = 2/466 (0%)
 Frame = +2

Query: 32   VENVGLNDAAKIQESAGTRAAKSYEN-SSEELMDMGELNNLLDELGPRYIDWSGPEPLPV 208
            ++++G+ D  K  ES  + +A+  ++ S EELMD+ ELN+LLDELGPR+ DWSG EPLPV
Sbjct: 384  IQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELGPRFKDWSGREPLPV 443

Query: 209  DADLLPSVVPGYTRPFRILPYRVRAGLGNKQMTSYRRLARTSPPHFALGRNRELQGLAMA 388
            DADLLPSVV  Y  PFR+LPY +R  L N++MT  RRLART PPHFALGR+RELQGLAMA
Sbjct: 444  DADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHFALGRSRELQGLAMA 503

Query: 389  MVKLWERNAIAKIAIKHGVLNTRNERMAEELRKLTGGTLLSRNKDFIVFYRGNDFLPPPV 568
            MVKLWER+AIAKIAIK GV NT N+RMAEEL+ LTGGTL+SRNKD+IVFYRGNDFLPP V
Sbjct: 504  MVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDYIVFYRGNDFLPPHV 563

Query: 569  TKALLKRQKFIEVQQEAEEMARDRASVLFASKTKVAKGPLVAGTLAETLAAKSRWGNEPS 748
             +AL +R+K  ++QQ+ EE AR RAS L  SK + AKGPLVAGTLAETLAA SRWG+EPS
Sbjct: 564  MEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAGTLAETLAATSRWGSEPS 623

Query: 749  SEDLEKMKKDFAIAKHASLVRYLEKKLARAQDKVNKAEKALRKVQEFLQPAEIPSDLEII 928
             ED+ KM +D A+A+HASLVRY+ KKLA A+ K+ K EKALRKVQE L+PAE+P DLE +
Sbjct: 624  EEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQEDLEPAELPMDLETL 683

Query: 929  TEEERILFRKMGLSLKAFLLVGRREVFDGTVENMHLHWKHRELVKIIVRGSNFPQVKHIA 1108
            ++EER LFRK+GLS+K FLL+G R +FDGTVENMHLHWK+RELVKIIV+G NF QVKHIA
Sbjct: 684  SDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIA 743

Query: 1109 ISLEAESGGLLVSVDKTTKGYAIILYRGKNYRRPQTIRPKNLLTKRQALARSIELQRREA 1288
            ISLEAESGG+LVSVD+T KGYAII+YRGKNY+RP  +RPKNLLTKRQALARSIELQR EA
Sbjct: 744  ISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEA 803

Query: 1289 LIHHISDVRKKIELLKSGLDQMEAGKEADEE-LHSRLNDAYTSDDD 1423
            L HHISD+ ++I+LLKS  ++M+ G   D++  +SRL+  Y++D+D
Sbjct: 804  LKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYSTDED 849


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  627 bits (1616), Expect = e-177
 Identities = 320/466 (68%), Positives = 388/466 (83%), Gaps = 2/466 (0%)
 Frame = +2

Query: 32   VENVGLNDAAKIQESAGTRAAKSYEN-SSEELMDMGELNNLLDELGPRYIDWSGPEPLPV 208
            ++++G+ D  K  ES  + +A+  ++ S EELMD+ ELN+LLDELGPR+ DWSG EPLPV
Sbjct: 381  IQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELGPRFKDWSGREPLPV 440

Query: 209  DADLLPSVVPGYTRPFRILPYRVRAGLGNKQMTSYRRLARTSPPHFALGRNRELQGLAMA 388
            DADLLPSVV  Y  PFR+LPY +R  L N++MT  RRLART PPHFALGR+RELQGLAMA
Sbjct: 441  DADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHFALGRSRELQGLAMA 500

Query: 389  MVKLWERNAIAKIAIKHGVLNTRNERMAEELRKLTGGTLLSRNKDFIVFYRGNDFLPPPV 568
            MVKLWER+AIAKIAIK GV NT N+RMAEEL+ LTGGTL+SRNKD+IVFYRGNDFLPP V
Sbjct: 501  MVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDYIVFYRGNDFLPPHV 560

Query: 569  TKALLKRQKFIEVQQEAEEMARDRASVLFASKTKVAKGPLVAGTLAETLAAKSRWGNEPS 748
             +AL +R+K  ++QQ+ EE AR RAS L  SK + AKGPLVAGTLAETLAA SRWG+EPS
Sbjct: 561  MEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAGTLAETLAATSRWGSEPS 620

Query: 749  SEDLEKMKKDFAIAKHASLVRYLEKKLARAQDKVNKAEKALRKVQEFLQPAEIPSDLEII 928
             ED+ KM +D A+A+HASLVRY+ KKLA A+ K+ K EKALRKVQE L+PAE+P DLE +
Sbjct: 621  EEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQEDLEPAELPMDLETL 680

Query: 929  TEEERILFRKMGLSLKAFLLVGRREVFDGTVENMHLHWKHRELVKIIVRGSNFPQVKHIA 1108
            ++EER LFRK+GLS+K FLL+G R +FDGTVENMHLHWK+RELVKIIV+G NF QVKHIA
Sbjct: 681  SDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIA 740

Query: 1109 ISLEAESGGLLVSVDKTTKGYAIILYRGKNYRRPQTIRPKNLLTKRQALARSIELQRREA 1288
            ISLEAESGG+LVSVD+T KGYAII+YRGKNY+RP  +RPKNLLTKRQALARSIELQR EA
Sbjct: 741  ISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEA 800

Query: 1289 LIHHISDVRKKIELLKSGLDQMEAGKEADEE-LHSRLNDAYTSDDD 1423
            L HHISD+ ++I+LLKS  ++M+ G   D++  +SRL+  Y++D+D
Sbjct: 801  LKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYSTDED 846


>ref|XP_002309217.1| predicted protein [Populus trichocarpa] gi|222855193|gb|EEE92740.1|
            predicted protein [Populus trichocarpa]
          Length = 977

 Score =  600 bits (1546), Expect = e-169
 Identities = 304/471 (64%), Positives = 377/471 (80%), Gaps = 3/471 (0%)
 Frame = +2

Query: 20   STSDVENVGLNDAAKIQESAGTRAAKSYEN-SSEELMDMGELNNLLDELGPRYIDWSGPE 196
            + S   + G+ D A+  ES    AAK  ++ S EELMD  ELN+LLDELGPRY DW G E
Sbjct: 477  TNSATSSAGMKDLARTMESIIPDAAKYLKDLSQEELMDFSELNHLLDELGPRYKDWCGRE 536

Query: 197  PLPVDADLLPSVVPGYTRPFRILPYRVRAGLGNKQMTSYRRLARTSPPHFALGRNRELQG 376
            PLPVDADLLP+VVPGY  P R+LPY V+  L NK  T++RRLART+PPHF LGRNRELQG
Sbjct: 537  PLPVDADLLPAVVPGYKSPLRLLPYGVKPCLSNKNTTNFRRLARTTPPHFVLGRNRELQG 596

Query: 377  LAMAMVKLWERNAIAKIAIKHGVLNTRNERMAEELRKLTGGTLLSRNKDFIVFYRGNDFL 556
            LA AMVKLWER+AIAKIAIK GV  TRNE MAEEL++LTGGTLLSRNK++IVFYRGNDFL
Sbjct: 597  LANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEELKRLTGGTLLSRNKEYIVFYRGNDFL 656

Query: 557  PPPVTKALLKRQKFIEVQQEAEEMARDRASVLFASKTKVAKGPLVAGTLAETLAAKSRWG 736
            PP + + L +R+K   + Q+ E+ AR   S    S  K  KGPLVAGTL ET+AA SRWG
Sbjct: 657  PPVINETLKERRKLAFLYQDEEDQARQMTSAFIGSSVKTTKGPLVAGTLVETVAAISRWG 716

Query: 737  NEPSSEDLEKMKKDFAIAKHASLVRYLEKKLARAQDKVNKAEKALRKVQEFLQPAEIPSD 916
            N+PSSED+E+M +D A+A+HASLV++LE KLA+A+ K+ K+EK L KVQE L+P E+P+D
Sbjct: 717  NQPSSEDVEEMIRDSALARHASLVKHLENKLAQAKGKLKKSEKDLAKVQENLEPTELPTD 776

Query: 917  LEIITEEERILFRKMGLSLKAFLLVGRREVFDGTVENMHLHWKHRELVKIIVRGSNFPQV 1096
            LE I++EER LFRK+GLS+K +L +GRR VFDGT+ENMHLHWK+RELVKIIV      QV
Sbjct: 777  LETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQV 836

Query: 1097 KHIAISLEAESGGLLVSVDKTTKGYAIILYRGKNYRRPQTIRPKNLLTKRQALARSIELQ 1276
            KHIAISLEAESGG+LVSVD+TTKGYAII+YRGKNY RPQ +RP+NLLT+RQALARS+ELQ
Sbjct: 837  KHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYMRPQAMRPENLLTRRQALARSVELQ 896

Query: 1277 RREALIHHISDVRKKIELLKSGLDQMEAGKEAD--EELHSRLNDAYTSDDD 1423
            R EAL HHI+D++++IEL+ S L++MEA K+++  + L+S+ +DA   ++D
Sbjct: 897  RYEALKHHITDLQERIELVTSELEEMEADKKSEVYKALYSKFDDASILNED 947


>ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 794

 Score =  578 bits (1489), Expect = e-162
 Identities = 298/470 (63%), Positives = 372/470 (79%), Gaps = 10/470 (2%)
 Frame = +2

Query: 44   GLNDAAKIQESAGTRAAKSYEN-------SSEELMDMGELNNLLDELGPRYIDWSGPEPL 202
            G +  A + E+ GT  +   E+       S EELM+M +LN+LLDELGPR+ DW+G +PL
Sbjct: 316  GSDGQASVNETVGTAESVIQESAEYLKDMSEEELMEMCDLNHLLDELGPRFKDWTGRQPL 375

Query: 203  PVDADLLPSVVPGYTRPFRILPYRVRAGLGNKQMTSYRRLARTSPPHFALGRNRELQGLA 382
            PVDADLLP+VVPGY  PFR+LPYR+R  L NK+MT++RRLART+ PHFALGRNRELQGLA
Sbjct: 376  PVDADLLPAVVPGYKTPFRLLPYRIRPCLTNKEMTNFRRLARTTAPHFALGRNRELQGLA 435

Query: 383  MAMVKLWERNAIAKIAIKHGVLNTRNERMAEELRKLTGGTLLSRNKDFIVFYRGNDFLPP 562
             AMVKLWE +AIAKIAIK GV NT N+RMAEELRKLTGGTLLSRNK++IVFYRGNDFLPP
Sbjct: 436  RAMVKLWETSAIAKIAIKRGVPNTCNDRMAEELRKLTGGTLLSRNKEYIVFYRGNDFLPP 495

Query: 563  PVTKALLKRQKFIEVQQEAEEMARDRASVLFASKTKVAKGPLVAGTLAETLAAKSRWGNE 742
             VT  L +RQK   +QQ+ E+ AR  AS +  S +K A+ PL+AGTL ET AA + WG++
Sbjct: 496  VVTNTLNERQKLTLLQQDEEDKARQIASSITVSNSKAAQVPLIAGTLTETRAATTNWGHQ 555

Query: 743  PSSEDLEKMKKDFAIAKHASLVRYLEKKLARAQDKVNKAEKALRKVQEFLQPAEIPSDLE 922
            PS +++E M +D A+ K ++LV++ EKKLA A+ K  KAEKAL KVQ  L PA+IPSDLE
Sbjct: 556  PSKQEIENMIRDSAMNKLSALVKHHEKKLALAKSKFRKAEKALAKVQRDLDPADIPSDLE 615

Query: 923  IITEEERILFRKMGLSLKAFLLVGRREVFDGTVENMHLHWKHRELVKIIVRGSNFPQVKH 1102
             +T EER LFRK+GLS+K +LL+GRR+V+ GT+ENMHLHWK+RELVK+IV+G N  QVKH
Sbjct: 616  TLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKLIVKGRNSAQVKH 675

Query: 1103 IAISLEAESGGLLVSVDKTTKG-YAIILYRGKNYRRPQTIRPKNLLTKRQALARSIELQR 1279
            I+ISLEAESGG+LVSVDK T+G + II+YRGKNY  P+ +RPKNLLT+RQALARS+ELQR
Sbjct: 676  ISISLEAESGGVLVSVDKDTRGHHTIIVYRGKNYFSPRVVRPKNLLTRRQALARSVELQR 735

Query: 1280 REALIHHISDVRKKIELLKSGLDQMEAGKEADEE--LHSRLNDAYTSDDD 1423
            REAL HHISD+ ++I LLKS L+ M+ GKE ++   L+  L +  +SDDD
Sbjct: 736  REALKHHISDLEERIGLLKSELEDMKNGKEIEDSKTLYPALENPVSSDDD 785


>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 789

 Score =  573 bits (1476), Expect = e-161
 Identities = 294/465 (63%), Positives = 366/465 (78%), Gaps = 11/465 (2%)
 Frame = +2

Query: 5    NSSKDSTSDV-ENVGLNDAA---KIQESAGTR------AAKSYEN-SSEELMDMGELNNL 151
            N +K +T DV  NV  +D     K+  + GT       A+K  +  S +ELM++ +LN+L
Sbjct: 320  NQAKSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHL 379

Query: 152  LDELGPRYIDWSGPEPLPVDADLLPSVVPGYTRPFRILPYRVRAGLGNKQMTSYRRLART 331
            LDE+GPR+ DWSG EP+PVDADLLP +VPGY  P RILPY VR  L NK++T +RRLAR 
Sbjct: 380  LDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTIFRRLARK 439

Query: 332  SPPHFALGRNRELQGLAMAMVKLWERNAIAKIAIKHGVLNTRNERMAEELRKLTGGTLLS 511
             PPHFALGRNR+LQGLA AMVKLWE+ AIAKIAIK GV NTRNERMAEELR LTGGTLLS
Sbjct: 440  MPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRILTGGTLLS 499

Query: 512  RNKDFIVFYRGNDFLPPPVTKALLKRQKFIEVQQEAEEMARDRASVLFASKTKVAKGPLV 691
            RNK++IVFYRGND+LPP +T+AL +R+K  + QQ+ EE  R  AS    SK K +  PLV
Sbjct: 500  RNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAAIESKVKASNAPLV 559

Query: 692  AGTLAETLAAKSRWGNEPSSEDLEKMKKDFAIAKHASLVRYLEKKLARAQDKVNKAEKAL 871
            AGTL ET+AA SRWG++PS  D+E M++D A+AK  SL+ YL+KKLA A+ KV  AEK +
Sbjct: 560  AGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAEKII 619

Query: 872  RKVQEFLQPAEIPSDLEIITEEERILFRKMGLSLKAFLLVGRREVFDGTVENMHLHWKHR 1051
             K+QE  +P+++P+DLE IT+EER+LFRK+GLS+K +LL+GRR V+DGTVENMHLHWK R
Sbjct: 620  AKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFR 679

Query: 1052 ELVKIIVRGSNFPQVKHIAISLEAESGGLLVSVDKTTKGYAIILYRGKNYRRPQTIRPKN 1231
            ELVKIIVRG    QVKH+AISLEAES G+++S+DKTTKGY +I+YRGKNY RP  +RPKN
Sbjct: 680  ELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMRPKN 739

Query: 1232 LLTKRQALARSIELQRREALIHHISDVRKKIELLKSGLDQMEAGK 1366
            +LT+RQALARSIELQRREAL HHI D+ +KIELLK+ L++ ++GK
Sbjct: 740  MLTRRQALARSIELQRREALKHHILDLEEKIELLKAELEERKSGK 784