BLASTX nr result
ID: Cimicifuga21_contig00019838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00019838
(566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC74281.1| hypothetical protein OsI_09528 [Oryza sativa Indi... 96 7e-35
ref|XP_003601462.1| ABC transporter family protein [Medicago tru... 114 1e-23
gb|AFW74111.1| hypothetical protein ZEAMMB73_442877 [Zea mays] 106 3e-21
ref|XP_002454815.1| hypothetical protein SORBIDRAFT_04g037970 [S... 106 3e-21
ref|XP_002299447.1| ABC transporter family protein [Populus tric... 106 3e-21
>gb|EEC74281.1| hypothetical protein OsI_09528 [Oryza sativa Indica Group]
Length = 708
Score = 95.5 bits (236), Expect(2) = 7e-35
Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Frame = -2
Query: 211 LQKCSNKNFF--WRMEKVNCLARALFIEPSVFLLDEPTNHLDQDAVLWLVSYLVKWPKTF 38
+Q+ K F WRM LARALFIEP + LLDEPTNHLD AVLWL +YL+KWPKTF
Sbjct: 327 MQRKRTKQFSGGWRMRIA--LARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTF 384
Query: 37 LVVSHAREFLNT 2
+VVSHAREFLNT
Sbjct: 385 IVVSHAREFLNT 396
Score = 77.4 bits (189), Expect(2) = 7e-35
Identities = 58/165 (35%), Positives = 81/165 (49%), Gaps = 48/165 (29%)
Frame = -1
Query: 539 VLVKHEKEA--IIKDIHLEN--INVSGCELIVD-------GRHYGFVGRNGTGKTTFLRC 393
V V H ++DIH+EN + V G +LI D GRHYG VGRNGTGKT+FLR
Sbjct: 167 VFVNHNNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLAFGRHYGLVGRNGTGKTSFLRA 226
Query: 392 RE----------------------NSTLARRSEL---VLQTEFEFDGETERNRGKVNREI 288
+ T A + L + + + E++ E E++ K +
Sbjct: 227 MAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIERKDLEYEAEFEQSVSKSKDGL 286
Query: 287 DKEKISQ------------SPNSAERHAASILAGLSFTPEMQQQK 189
DK+ IS+ ++AE AASILAGLSFTPEMQ+++
Sbjct: 287 DKDAISKRLEEIYKRLEFIDADAAEARAASILAGLSFTPEMQRKR 331
>ref|XP_003601462.1| ABC transporter family protein [Medicago truncatula]
gi|355490510|gb|AES71713.1| ABC transporter family
protein [Medicago truncatula]
Length = 713
Score = 114 bits (284), Expect = 1e-23
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 15/150 (10%)
Frame = -2
Query: 406 LFSDVERTQLLQEEANLCYRQNLSSMVRQRETG------GRSTGRSTKKKFHRVPILQND 245
L +D+ER QLL+EEA+L +Q S ++ T G + + ++ + R+ ++ D
Sbjct: 253 LNTDIERAQLLEEEAHLIAKQRESEDSTEKGTDANGAVKGDAISQRLEQIYKRLELIDAD 312
Query: 244 TR-------LPFWRVSVLLQKCSNKNFF--WRMEKVNCLARALFIEPSVFLLDEPTNHLD 92
+ L S +QK + K F WRM LARALFIEP + LLDEPTNHLD
Sbjct: 313 SAESRAASILAGLSFSPEMQKKATKTFSGGWRMRIA--LARALFIEPDMLLLDEPTNHLD 370
Query: 91 QDAVLWLVSYLVKWPKTFLVVSHAREFLNT 2
AVLWL SYLVKWPKTF+VVSHAREFLNT
Sbjct: 371 LHAVLWLESYLVKWPKTFIVVSHAREFLNT 400
Score = 73.2 bits (178), Expect = 3e-11
Identities = 61/176 (34%), Positives = 82/176 (46%), Gaps = 59/176 (33%)
Frame = -1
Query: 542 VVLVKHEKEA--IIKDIHLEN--INVSGCELIVDG-------RHYGFVGRNGTGKTTFLR 396
V VKHE +KDIH++N I+V G +LI+DG RHYG VGRNGTGKTTFLR
Sbjct: 159 VACVKHEAGGGHTVKDIHMDNFTISVGGHDLILDGSVTLSFGRHYGLVGRNGTGKTTFLR 218
Query: 395 --------------------------------CRENSTLARRSEL-----VLQTEFEFDG 327
C N+ + R L ++ + E +
Sbjct: 219 HMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLLEEEAHLIAKQRESED 278
Query: 326 ETERN---RGKVNREIDKEKISQ--------SPNSAERHAASILAGLSFTPEMQQQ 192
TE+ G V + +++ Q +SAE AASILAGLSF+PEMQ++
Sbjct: 279 STEKGTDANGAVKGDAISQRLEQIYKRLELIDADSAESRAASILAGLSFSPEMQKK 334
>gb|AFW74111.1| hypothetical protein ZEAMMB73_442877 [Zea mays]
Length = 720
Score = 106 bits (264), Expect = 3e-21
Identities = 69/153 (45%), Positives = 88/153 (57%), Gaps = 18/153 (11%)
Frame = -2
Query: 406 LFSDVERTQLLQEEANLCYRQN---LSSMVRQRETGGR------STGRSTKKKFHRVPIL 254
L +DVER QLLQEEA L +Q + + Q G+ S + ++ + R+ ++
Sbjct: 259 LNADVERVQLLQEEARLVQQQKDLEIEAEFGQSSDKGKDGFDKDSISKRLEEIYKRLELI 318
Query: 253 QNDTR-------LPFWRVSVLLQKCSNKNFF--WRMEKVNCLARALFIEPSVFLLDEPTN 101
D L + +Q+ K F WRM LARALFIEP + LLDEPTN
Sbjct: 319 DADAAEARAASILAGLSFTPEMQRKRTKQFSGGWRMRIA--LARALFIEPDLLLLDEPTN 376
Query: 100 HLDQDAVLWLVSYLVKWPKTFLVVSHAREFLNT 2
HLD AVLWL +YL+KWPKTF+VVSHAREFLNT
Sbjct: 377 HLDLHAVLWLETYLLKWPKTFIVVSHAREFLNT 409
Score = 69.3 bits (168), Expect = 4e-10
Identities = 59/179 (32%), Positives = 81/179 (45%), Gaps = 62/179 (34%)
Frame = -1
Query: 539 VLVKHEKEA--IIKDIHLEN--INVSGCELIVD-------GRHYGFVGRNGTGKTTFLR- 396
V V H + ++DIH+EN + V G +LI + GRHYG VGRNGTGKT+FLR
Sbjct: 166 VYVNHSNDGGPAVRDIHMENFSVTVGGRDLIQEATITLAFGRHYGLVGRNGTGKTSFLRA 225
Query: 395 -------------------------------CRENSTLAR------RSELV-LQTEFEFD 330
C N+ + R + LV Q + E +
Sbjct: 226 MALHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADVERVQLLQEEARLVQQQKDLEIE 285
Query: 329 GETERNRGKVNREIDKEKISQ------------SPNSAERHAASILAGLSFTPEMQQQK 189
E ++ K DK+ IS+ ++AE AASILAGLSFTPEMQ+++
Sbjct: 286 AEFGQSSDKGKDGFDKDSISKRLEEIYKRLELIDADAAEARAASILAGLSFTPEMQRKR 344
>ref|XP_002454815.1| hypothetical protein SORBIDRAFT_04g037970 [Sorghum bicolor]
gi|241934646|gb|EES07791.1| hypothetical protein
SORBIDRAFT_04g037970 [Sorghum bicolor]
Length = 720
Score = 106 bits (264), Expect = 3e-21
Identities = 69/153 (45%), Positives = 89/153 (58%), Gaps = 18/153 (11%)
Frame = -2
Query: 406 LFSDVERTQLLQEEANLCYRQ-NLSSMVRQRETGGRST--------GRSTKKKFHRVPIL 254
L +DVER QLLQEEA L +Q +L ++ G+S + ++ + R+ ++
Sbjct: 259 LNADVERVQLLQEEARLVQQQKDLEIEAEFGQSSGKSKDGLDKDSISKRLEEIYKRLELI 318
Query: 253 QNDTR-------LPFWRVSVLLQKCSNKNFF--WRMEKVNCLARALFIEPSVFLLDEPTN 101
D L + +Q+ K F WRM LARALFIEP + LLDEPTN
Sbjct: 319 DADAAEARAASILAGLSFTPEMQRKRTKQFSGGWRMRIA--LARALFIEPDLLLLDEPTN 376
Query: 100 HLDQDAVLWLVSYLVKWPKTFLVVSHAREFLNT 2
HLD AVLWL +YL+KWPKTF+VVSHAREFLNT
Sbjct: 377 HLDLHAVLWLETYLLKWPKTFIVVSHAREFLNT 409
Score = 73.2 bits (178), Expect = 3e-11
Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 62/179 (34%)
Frame = -1
Query: 539 VLVKHEKEA--IIKDIHLEN--INVSGCELIVD-------GRHYGFVGRNGTGKTTFLR- 396
V V H + ++DIH+EN + V G +LI + GRHYG VGRNGTGKT+FLR
Sbjct: 166 VYVNHSNDGGPAVRDIHMENFSVTVGGRDLIQEATITLAFGRHYGLVGRNGTGKTSFLRA 225
Query: 395 -------------------------------CRENSTLAR------RSELV-LQTEFEFD 330
C N+ + R + LV Q + E +
Sbjct: 226 MALHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADVERVQLLQEEARLVQQQKDLEIE 285
Query: 329 GETERNRGKVNREIDKEKISQ------------SPNSAERHAASILAGLSFTPEMQQQK 189
E ++ GK +DK+ IS+ ++AE AASILAGLSFTPEMQ+++
Sbjct: 286 AEFGQSSGKSKDGLDKDSISKRLEEIYKRLELIDADAAEARAASILAGLSFTPEMQRKR 344
>ref|XP_002299447.1| ABC transporter family protein [Populus trichocarpa]
gi|222846705|gb|EEE84252.1| ABC transporter family
protein [Populus trichocarpa]
Length = 716
Score = 106 bits (264), Expect = 3e-21
Identities = 73/153 (47%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Frame = -2
Query: 406 LFSDVERTQLLQEEANLCYRQNLSSMVRQRETG-GRSTGRSTK-----------KKFHRV 263
L SD+ERT+LL+EE L +Q G G G K K+ +
Sbjct: 253 LDSDIERTRLLEEEVRLHAQQRDLDFEDATGNGKGDQIGAVNKDAISQRLEEIYKRLELI 312
Query: 262 PILQNDTR----LPFWRVSVLLQKCSNKNFF--WRMEKVNCLARALFIEPSVFLLDEPTN 101
+ R L S +QK + K F WRM LARALFIEP V LLDEPTN
Sbjct: 313 DAYSAEARAASILAGLSFSPEMQKKATKTFSGGWRMRIA--LARALFIEPDVLLLDEPTN 370
Query: 100 HLDQDAVLWLVSYLVKWPKTFLVVSHAREFLNT 2
HLD AVLWL SYLVKWPKTF+VVSHAREFLNT
Sbjct: 371 HLDLHAVLWLESYLVKWPKTFIVVSHAREFLNT 403
Score = 77.8 bits (190), Expect = 1e-12
Identities = 62/166 (37%), Positives = 76/166 (45%), Gaps = 60/166 (36%)
Frame = -1
Query: 509 IKDIHLENINVS--GCELIVDG-------RHYGFVGRNGTGKTTFLR------------- 396
IKDIHLEN N+S G +LIVDG RHYG VGRNGTGKTTFLR
Sbjct: 172 IKDIHLENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRYMALHAIDGIPRN 231
Query: 395 -------------------CRENSTLARRSEL-------VLQTEFEFDGETERNRGKVNR 294
C +S + R L Q + +F+ T +G
Sbjct: 232 CQILHVEQEVVGDDISALQCVLDSDIERTRLLEEEVRLHAQQRDLDFEDATGNGKGDQIG 291
Query: 293 EIDKEKISQ------------SPNSAERHAASILAGLSFTPEMQQQ 192
++K+ ISQ SAE AASILAGLSF+PEMQ++
Sbjct: 292 AVNKDAISQRLEEIYKRLELIDAYSAEARAASILAGLSFSPEMQKK 337