BLASTX nr result

ID: Cimicifuga21_contig00019776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019776
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...    84   1e-14
ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...    83   3e-14
emb|CBI30650.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...    82   3e-14
tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea m...    80   2e-13

>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +3

Query: 3   KLGEEVGYIIRFEDLTKPGVTKIKFLTDGVLLREMMDDPLLTNYSYLL 146
           KLGEEVGY IRFEDLT P VT++KFLTDGVLLREMMDDPLLT YS ++
Sbjct: 121 KLGEEVGYTIRFEDLTNPDVTRVKFLTDGVLLREMMDDPLLTKYSVIM 168


>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +3

Query: 3   KLGEEVGYIIRFEDLTKPGVTKIKFLTDGVLLREMMDDPLLTNYSYLL 146
           KLGEEVGY IRFEDL+K GVT +KFLTDGVLLREMMDDPLLT YS ++
Sbjct: 120 KLGEEVGYTIRFEDLSKTGVTMVKFLTDGVLLREMMDDPLLTKYSVIM 167


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +3

Query: 3   KLGEEVGYIIRFEDLTKPGVTKIKFLTDGVLLREMMDDPLLTNYSYLL 146
           KLGEEVGY IRFEDL+K GVT +KFLTDGVLLREMMDDPLLT YS ++
Sbjct: 120 KLGEEVGYTIRFEDLSKTGVTMVKFLTDGVLLREMMDDPLLTKYSVIM 167


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = +3

Query: 3   KLGEEVGYIIRFEDLTKPGVTKIKFLTDGVLLREMMDDPLLTNYSYLL 146
           KLGEEVGY IRFEDLT   VTKIKFLTDGVLLREMMDDPLLT YS ++
Sbjct: 121 KLGEEVGYTIRFEDLTNSDVTKIKFLTDGVLLREMMDDPLLTKYSVIM 168


>tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 940

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = +3

Query: 3   KLGEEVGYIIRFEDLTKPGVTKIKFLTDGVLLREMMDDPLLTNYSYLL 146
           KLGEEVGY IRFED T PG+T IKFLTDGVL+REMM+DPLLT YS ++
Sbjct: 364 KLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTKYSVIM 411


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