BLASTX nr result

ID: Cimicifuga21_contig00019753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019753
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609980.1| Polygalacturonase-like protein [Medicago tru...    60   2e-07
ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi...    55   8e-06

>ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
           gi|355511035|gb|AES92177.1| Polygalacturonase-like
           protein [Medicago truncatula]
          Length = 563

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
 Frame = +2

Query: 122 MVESLTYGRFCHQR------IPGLISSHWTFFTVLWIVGGASLFIWQRNNLVDGFWI 274
           MVE+ T GRF HQR      +P  I+SH T F VLWI    S+FIWQRN +V GF +
Sbjct: 1   MVETSTLGRFHHQRLDFKRCVPAFITSHKTLFMVLWIAAFLSVFIWQRNMVVGGFMV 57


>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
           gi|223544730|gb|EEF46246.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
 Frame = +2

Query: 119 IMVESLTYGRFCHQR------IPGLISSHWTFFTVLWIVGGASLFIWQRNNLVDGF 268
           +M+E+ + GR  +QR      +P   SSH T FTVLWI   AS+F+WQRN + DGF
Sbjct: 1   MMLETASLGRLHYQRLELKRWVPTFFSSHKTLFTVLWIAAFASVFVWQRNVVGDGF 56


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