BLASTX nr result

ID: Cimicifuga21_contig00019745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019745
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15551.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
ref|XP_002971335.1| hypothetical protein SELMODRAFT_94945 [Selag...    60   2e-07
ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selag...    59   5e-07
ref|XP_002529617.1| pentatricopeptide repeat-containing protein,...    59   5e-07

>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = +1

Query: 1   IGSSLVYLYTSCRELDLAKIVFEGIEVRSVVTWNVMISGCVRSGKFLKEALQCFQEMRVL 180
           +G++L+ +Y  C  +D A IVFEGIE + VV+WN MI+G  R G F KEAL  F+ M+  
Sbjct: 350 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG-FGKEALMLFESMKKT 408

Query: 181 CVDPFD 198
            + P D
Sbjct: 409 GILPDD 414


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = +1

Query: 1   IGSSLVYLYTSCRELDLAKIVFEGIEVRSVVTWNVMISGCVRSGKFLKEALQCFQEMRVL 180
           +G++L+ +Y  C  +D A IVFEGIE + VV+WN MI+G  R G F KEAL  F+ M+  
Sbjct: 431 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG-FGKEALMLFESMKKT 489

Query: 181 CVDPFD 198
            + P D
Sbjct: 490 GILPDD 495


>ref|XP_002971335.1| hypothetical protein SELMODRAFT_94945 [Selaginella moellendorffii]
           gi|300161317|gb|EFJ27933.1| hypothetical protein
           SELMODRAFT_94945 [Selaginella moellendorffii]
          Length = 614

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/57 (47%), Positives = 44/57 (77%)
 Frame = +1

Query: 1   IGSSLVYLYTSCRELDLAKIVFEGIEVRSVVTWNVMISGCVRSGKFLKEALQCFQEM 171
           +G++LV  Y+ C ++D A+ VF+GIE + +VTWNVMI+G VR+G   +EA++ +Q+M
Sbjct: 420 VGTTLVDFYSKCHDVDTARSVFDGIEGKDIVTWNVMITGFVRNGHG-REAVRLYQKM 475


>ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
           gi|300167208|gb|EFJ33813.1| hypothetical protein
           SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/59 (44%), Positives = 42/59 (71%)
 Frame = +1

Query: 1   IGSSLVYLYTSCRELDLAKIVFEGIEVRSVVTWNVMISGCVRSGKFLKEALQCFQEMRV 177
           + ++LV +Y  C  LD+A++VF+ IE +SVV+WN MI+ C R G+  ++ALQ F+ M +
Sbjct: 124 VQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGE-AEQALQLFKRMEL 181


>ref|XP_002529617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530902|gb|EEF32762.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 438

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/70 (48%), Positives = 46/70 (65%)
 Frame = +1

Query: 1   IGSSLVYLYTSCRELDLAKIVFEGIEVRSVVTWNVMISGCVRSGKFLKEALQCFQEMRVL 180
           + SSLV LY  C E+ LAK VF+ I  R++V W+ MISG  R G  + EAL  F+EM+ +
Sbjct: 269 VQSSLVSLYGKCEEIRLAKQVFDEITERNLVCWSAMISGYARVG-MVNEALSMFREMQEV 327

Query: 181 CVDPFDEFSL 210
            ++P DE SL
Sbjct: 328 GIEP-DEVSL 336


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