BLASTX nr result

ID: Cimicifuga21_contig00019738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019738
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283646.2| PREDICTED: protein kinase APK1A, chloroplast...    85   1e-14
emb|CBI16124.3| unnamed protein product [Vitis vinifera]               85   1e-14
ref|XP_002266032.1| PREDICTED: protein kinase APK1A, chloroplast...    82   9e-14
ref|XP_002299870.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_004165801.1| PREDICTED: LOW QUALITY PROTEIN: protein kina...    79   1e-12

>ref|XP_002283646.2| PREDICTED: protein kinase APK1A, chloroplastic-like [Vitis
           vinifera]
          Length = 442

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/64 (64%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -1

Query: 190 MGNCLGTRVKAESPIHTGATPKFVSNDGKDYDS-SGKFSLSSVPPTPRSEGEILQSSNLK 14
           MG CL  R+KAESP HTG + K+VS DG + +S S K S++SVPPTPRSEG+ILQS NLK
Sbjct: 1   MGVCLSARIKAESPCHTGGSSKYVSTDGNEQNSTSSKVSVASVPPTPRSEGDILQSPNLK 60

Query: 13  SFSF 2
           +F+F
Sbjct: 61  NFTF 64


>emb|CBI16124.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/64 (64%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -1

Query: 190 MGNCLGTRVKAESPIHTGATPKFVSNDGKDYDS-SGKFSLSSVPPTPRSEGEILQSSNLK 14
           MG CL  R+KAESP HTG + K+VS DG + +S S K S++SVPPTPRSEG+ILQS NLK
Sbjct: 1   MGVCLSARIKAESPCHTGGSSKYVSTDGNEQNSTSSKVSVASVPPTPRSEGDILQSPNLK 60

Query: 13  SFSF 2
           +F+F
Sbjct: 61  NFTF 64


>ref|XP_002266032.1| PREDICTED: protein kinase APK1A, chloroplastic [Vitis vinifera]
           gi|297740368|emb|CBI30550.3| unnamed protein product
           [Vitis vinifera]
          Length = 405

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -1

Query: 190 MGNCLGTRVKAESPIHTGATPKFVSNDGKDYD-SSGKFSLSSVPPTPRSEGEILQSSNLK 14
           MG C   R+KAESP+HTGA+ K VS D  D   SS KFS +S+P TPR+EGEILQ+SNLK
Sbjct: 1   MGACCSNRIKAESPVHTGASSKNVSKDENDLSRSSSKFSSTSIPQTPRTEGEILQASNLK 60

Query: 13  SFSF 2
           SF F
Sbjct: 61  SFGF 64


>ref|XP_002299870.1| predicted protein [Populus trichocarpa] gi|222847128|gb|EEE84675.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = -1

Query: 190 MGNCLGTRVKAESPIHTGATPKFVSNDGKDYDSSGKFSLS-SVPPTPRSEGEILQSSNLK 14
           MG CL  ++KAES  +TG + K+VS DG D  S+G   LS SVPPTPRSEGEILQS+NLK
Sbjct: 1   MGICLSAQIKAESSCNTGLSSKYVSTDGNDLSSTGSKVLSVSVPPTPRSEGEILQSTNLK 60

Query: 13  SFSF 2
           SFSF
Sbjct: 61  SFSF 64


>ref|XP_004165801.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase APK1A,
           chloroplastic-like [Cucumis sativus]
          Length = 404

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = -1

Query: 190 MGNCLGTRVKAESPIHTGATPKFVSNDGKDYDSSG-KFSLSSVPPTPRSEGEILQSSNLK 14
           MG CL TR+KAE+  +TG     VS DG D  S+  K +L SVPPTPR+EGEILQSSNLK
Sbjct: 1   MGVCLSTRIKAENSCNTGVNSNGVSTDGNDIGSTNSKINLLSVPPTPRTEGEILQSSNLK 60

Query: 13  SFSF 2
           SFSF
Sbjct: 61  SFSF 64


Top