BLASTX nr result

ID: Cimicifuga21_contig00019722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019722
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifer...   251   1e-64
ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_002514798.1| conserved hypothetical protein [Ricinus comm...   233   4e-59
gb|AFK43635.1| unknown [Medicago truncatula]                          211   2e-52
ref|NP_001237606.1| uncharacterized protein LOC100499897 [Glycin...   205   1e-50

>ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifera]
           gi|298205056|emb|CBI38352.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  251 bits (641), Expect = 1e-64
 Identities = 127/208 (61%), Positives = 156/208 (75%), Gaps = 2/208 (0%)
 Frame = +2

Query: 188 QQFVACRMGATLVQTAVSVLENESFQRPYMTARRI--LQSWIFKPRFTRKISKLRIKAAL 361
           ++ +ACRMG  ++Q+ +SV E+ES    Y+T      +Q+W  +P F+ +ISKL +K+A 
Sbjct: 14  EKSMACRMGGIMLQSTLSVPESESSDCSYITFTTCCTIQNWNNEPSFSGQISKLGMKSAP 73

Query: 362 VSMKSFQTKRPSWRIAFALNTGGTPDSGGQDGVNSDNTGLGQTRLGRIVGASGRQLLEKL 541
              KSFQT+R  W+ AFAL+TGG PD+GGQ+ +N +   LGQTRLGRIV A GRQLL KL
Sbjct: 74  FPRKSFQTRRHGWKTAFALDTGGIPDNGGQENLNGNGPDLGQTRLGRIVSAGGRQLLAKL 133

Query: 542 NATRKNFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPMSV 721
           N+ RKNFPMK+FLLLLGFYTANALATILGQTGDWD          IEGIGML+YKK  S 
Sbjct: 134 NSARKNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLVYKKSSSQ 193

Query: 722 SNGRFKSLVVLVNYWKAGVCLGLFVDAF 805
           S GR +SLVV++NYWKAGVCLGLFVDAF
Sbjct: 194 STGRLQSLVVMINYWKAGVCLGLFVDAF 221


>ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|222852020|gb|EEE89567.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  234 bits (596), Expect = 2e-59
 Identities = 123/205 (60%), Positives = 149/205 (72%), Gaps = 2/205 (0%)
 Frame = +2

Query: 197 VACRMGATLVQTAVSVLENESFQRPYMT-ARRILQSWIFKPRFTRKISKLRIKAALVSMK 373
           +AC++GA ++Q+ +SV+ NE  +R  +T A   +Q+   +P F+ + SK+ IK       
Sbjct: 5   MACQVGARMLQSGLSVMVNEVSERTCITIATCAMQNRNSEPSFSGQASKIGIKFVPFQKT 64

Query: 374 SFQTKRPSWRIAFALNTGGTPDSGGQDGVNSDNT-GLGQTRLGRIVGASGRQLLEKLNAT 550
            FQ +R  WRIAFAL+TGG P +GGQ+ VN D+  GLG TRLGRIV A GRQLLEKLN+ 
Sbjct: 65  RFQLRRQGWRIAFALDTGGLPGNGGQENVNGDSPPGLGGTRLGRIVSAGGRQLLEKLNSA 124

Query: 551 RKNFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPMSVSNG 730
           RKNFPMKIFLLLLGFYTANALATILGQTGDWD          IEGIGMLMYKKP S+S  
Sbjct: 125 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSLSTR 184

Query: 731 RFKSLVVLVNYWKAGVCLGLFVDAF 805
           R +  V ++NYWKAGVCLGLFVDAF
Sbjct: 185 RLQYFVAMMNYWKAGVCLGLFVDAF 209


>ref|XP_002514798.1| conserved hypothetical protein [Ricinus communis]
           gi|223545849|gb|EEF47352.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score =  233 bits (594), Expect = 4e-59
 Identities = 117/196 (59%), Positives = 146/196 (74%), Gaps = 1/196 (0%)
 Frame = +2

Query: 221 LVQTAVSVLENESFQRPYMTARRI-LQSWIFKPRFTRKISKLRIKAALVSMKSFQTKRPS 397
           ++Q++VSV+E E  +R  +T     +Q+W  +P F+R+I K+ +K+A    K F+     
Sbjct: 2   VLQSSVSVMEGEVSERSCITLTICAMQNWSVEPTFSRQIPKIGLKSASFLRKRFKLSGQD 61

Query: 398 WRIAFALNTGGTPDSGGQDGVNSDNTGLGQTRLGRIVGASGRQLLEKLNATRKNFPMKIF 577
           WRI FAL+TGG   +GG++ ++ D++GLG TRLGRIV A GRQLL+KLN+ RKNFPMKIF
Sbjct: 62  WRIPFALDTGGISGNGGEENLDGDSSGLGSTRLGRIVSAGGRQLLQKLNSARKNFPMKIF 121

Query: 578 LLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPMSVSNGRFKSLVVLV 757
           LLLLGFYTANALATILGQTGDWD          IEGIGMLMYKKP S S GR +S VV++
Sbjct: 122 LLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPTSPSTGRLQSFVVMM 181

Query: 758 NYWKAGVCLGLFVDAF 805
           NYWKAGVCLGLFVDAF
Sbjct: 182 NYWKAGVCLGLFVDAF 197


>gb|AFK43635.1| unknown [Medicago truncatula]
          Length = 201

 Score =  211 bits (537), Expect = 2e-52
 Identities = 106/203 (52%), Positives = 135/203 (66%)
 Frame = +2

Query: 197 VACRMGATLVQTAVSVLENESFQRPYMTARRILQSWIFKPRFTRKISKLRIKAALVSMKS 376
           +AC+MG+  + + +S+ ENE  +R +      + S   +PRF+     + +K        
Sbjct: 1   MACQMGSMNLPSKLSITENEGSKRSF------IHSCCCQPRFSALTPNVGMKPLPFLQSR 54

Query: 377 FQTKRPSWRIAFALNTGGTPDSGGQDGVNSDNTGLGQTRLGRIVGASGRQLLEKLNATRK 556
           F  +RP W +AFALNT G   +G Q  +N   + LG TRLGRI+ A GRQLL+KLN+ RK
Sbjct: 55  FLRRRPGWTVAFALNTDGLSGNGEQQSLNDSGSSLGGTRLGRILSAGGRQLLDKLNSARK 114

Query: 557 NFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPMSVSNGRF 736
           NFP K+FLLLLGFYTANALATILGQTGDWD          IEGIGML+YKKP +   GR 
Sbjct: 115 NFPTKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYKKPPTTRTGRL 174

Query: 737 KSLVVLVNYWKAGVCLGLFVDAF 805
           +S +V+VNYWKAG+CLGLFVDAF
Sbjct: 175 QSFLVMVNYWKAGICLGLFVDAF 197


>ref|NP_001237606.1| uncharacterized protein LOC100499897 [Glycine max]
           gi|255627495|gb|ACU14092.1| unknown [Glycine max]
          Length = 208

 Score =  205 bits (521), Expect = 1e-50
 Identities = 106/204 (51%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
 Frame = +2

Query: 197 VACRMGATLVQTAVSVLENESFQRPYMT-ARRILQSWIFKPRFTRKISKLRIKAALVSMK 373
           +AC+MG   +   +S+ ENES ++  +  A   + S   +P F     K  +K++  +  
Sbjct: 1   MACQMGTMTLNWRLSITENESSEKSCVNLATSRIHSCCREPNFNGLTLKACMKSSPFAQS 60

Query: 374 SFQTKRPSWRIAFALNTGGTPDSGGQDGVNSDNTGLGQTRLGRIVGASGRQLLEKLNATR 553
            F  +R  W+IAFALNTGG   +G Q   N  ++ LG TRLGRI+ A GRQLLEKLN+ R
Sbjct: 61  CFLGRRAGWKIAFALNTGGVSGNGDQQSFNEASSNLGGTRLGRILTAGGRQLLEKLNSAR 120

Query: 554 KNFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPMSVSNGR 733
           KN P+K+FLLLLGFYTANALATILGQTGDWD          IEGIGML+Y+K  +   GR
Sbjct: 121 KNIPLKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYRKLPTARTGR 180

Query: 734 FKSLVVLVNYWKAGVCLGLFVDAF 805
            +S +VLV+YWKAG+CLGLFVDAF
Sbjct: 181 LQSFLVLVDYWKAGICLGLFVDAF 204


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