BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019705
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   161   5e-38
ref|XP_002518584.1| pentatricopeptide repeat-containing protein,...   154   9e-36
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35

>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/123 (66%), Positives = 97/123 (78%)
 Frame = +3

Query: 9   KCERTVKSVNALLSAHVDSKNCEKVEELFRELPTKLSVTPDEYSYNITIQALCRMGNLDS 188
           KCER+V S NALL A V+SK  +KVE  F ELP+KLSV PD  SYNI I  LC MG++DS
Sbjct: 124 KCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMGSMDS 183

Query: 189 GLSLLDEMEKKGLKPNLVTFNTLLFAFYDNGRFLDGERIWGRMEKKEIVPDIISYNSKL* 368
            + +LDEMEKK L+P+L+TFNTLL   Y +GRFLDGE+IWGRMEKK I+PDI SYN+KL 
Sbjct: 184 AVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLV 243

Query: 369 GLV 377
           GLV
Sbjct: 244 GLV 246


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/123 (66%), Positives = 97/123 (78%)
 Frame = +3

Query: 9   KCERTVKSVNALLSAHVDSKNCEKVEELFRELPTKLSVTPDEYSYNITIQALCRMGNLDS 188
           KCER+V S NALL A V SK  +KVE  F ELP+KLSV PD  SYNI I+ LC MG++DS
Sbjct: 124 KCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSMDS 183

Query: 189 GLSLLDEMEKKGLKPNLVTFNTLLFAFYDNGRFLDGERIWGRMEKKEIVPDIISYNSKL* 368
            + +LDEMEKK L+P+L+TFNTLL   Y +GRFLDGE+IWGRMEKK I+PDI SYN+KL 
Sbjct: 184 AVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLV 243

Query: 369 GLV 377
           GLV
Sbjct: 244 GLV 246


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  161 bits (408), Expect = 5e-38
 Identities = 81/123 (65%), Positives = 96/123 (78%)
 Frame = +3

Query: 9   KCERTVKSVNALLSAHVDSKNCEKVEELFRELPTKLSVTPDEYSYNITIQALCRMGNLDS 188
           KCER+V S N LL A V SK  +KVE  F ELP+KLSV PD  SYNI I+ LC MG++DS
Sbjct: 124 KCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSMDS 183

Query: 189 GLSLLDEMEKKGLKPNLVTFNTLLFAFYDNGRFLDGERIWGRMEKKEIVPDIISYNSKL* 368
            + +LDEMEKK L+P+L+TFNTLL   Y +GRFLDGE+IWGRMEKK I+PDI SYN+KL 
Sbjct: 184 AVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLV 243

Query: 369 GLV 377
           GLV
Sbjct: 244 GLV 246


>ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542429|gb|EEF43971.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/124 (58%), Positives = 95/124 (76%)
 Frame = +3

Query: 3   ELKCERTVKSVNALLSAHVDSKNCEKVEELFRELPTKLSVTPDEYSYNITIQALCRMGNL 182
           +LKC RTV+S NALLSA +DS   +KV+   R+ P KL +TPD  S+NI I+  C +GNL
Sbjct: 118 DLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCEIGNL 177

Query: 183 DSGLSLLDEMEKKGLKPNLVTFNTLLFAFYDNGRFLDGERIWGRMEKKEIVPDIISYNSK 362
           DSG+ +L EMEK+G++P+L+TFNTLL  FY NGRF+DGE+IW  ME K +VP++ SYNS+
Sbjct: 178 DSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRSYNSR 237

Query: 363 L*GL 374
           L GL
Sbjct: 238 LRGL 241


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Vitis vinifera]
          Length = 379

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/125 (57%), Positives = 94/125 (75%)
 Frame = +3

Query: 3   ELKCERTVKSVNALLSAHVDSKNCEKVEELFRELPTKLSVTPDEYSYNITIQALCRMGNL 182
           +L CERTV S NALLSA V+SK  +K++  F+ELP  L + PD  SYNI + A C MG+L
Sbjct: 120 KLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSL 179

Query: 183 DSGLSLLDEMEKKGLKPNLVTFNTLLFAFYDNGRFLDGERIWGRMEKKEIVPDIISYNSK 362
           DS LS+LDEMEK GL+P+L+TFNTLL AFY NG + DGE+IW  M+K  + P++ SYN+K
Sbjct: 180 DSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAK 239

Query: 363 L*GLV 377
           L G++
Sbjct: 240 LRGVI 244