BLASTX nr result

ID: Cimicifuga21_contig00019699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019699
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   287   3e-75
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   282   7e-74
ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...   281   2e-73
gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]                     280   3e-73
ref|XP_002520135.1| voltage-dependent anion-selective channel, p...   279   6e-73

>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 1 [Vitis vinifera]
          Length = 276

 Score =  287 bits (734), Expect = 3e-75
 Identities = 154/271 (56%), Positives = 187/271 (69%), Gaps = 7/271 (2%)
 Frame = +3

Query: 6   GLGPGLYTDLGNECRDFLYTDYETDHKFNLTG------AITFSGTRPSA-FLSGVKAQLE 164
           G GPGLY+D+G   RD LY DY++DHKF +T       AIT SGT+    F++ V  QL+
Sbjct: 2   GKGPGLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQLK 61

Query: 165 KDNVTADIKVDATHRLFGSITVNEPAPGLKTIFSFVAPDQSSGVVKLEYQYDNIGISTSI 344
             N+T D+KVD    LF +ITV+EPAPGLKTIFSF+ PDQ SG V+L+Y ++  GISTSI
Sbjct: 62  NKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSI 121

Query: 345 GLVANPIVTFSGVVGRKKLSVGTDISFDTAARNFIKCDVGLSVSYKNFSTSLILNDKFHT 524
           GL ANPIV FSGVVG   LS+GTD+SFDTA  NF KC+ GL  S  +   +L LNDK  T
Sbjct: 122 GLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGDT 181

Query: 525 LKSSLRCILSHHTKTAIGYEIAVYFSTNTAIVTIGTQHKLDPLTMVKARINNHGKASASI 704
           L +S    +S  T TA+G E++  FSTN   +TIGTQH LDPLT VKAR NN GK SA I
Sbjct: 182 LNASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSALI 241

Query: 705 QRELRPKCAFSIFGEVNLWAAERRAKVGLAL 797
           Q E RPK  F+I GEV+  A E+ AK+GLAL
Sbjct: 242 QHEWRPKSLFTISGEVDARAVEKSAKIGLAL 272


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118481103|gb|ABK92505.1| unknown
           [Populus trichocarpa] gi|222852606|gb|EEE90153.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  282 bits (722), Expect = 7e-74
 Identities = 149/271 (54%), Positives = 189/271 (69%), Gaps = 7/271 (2%)
 Frame = +3

Query: 6   GLGPGLYTDLGNECRDFLYTDYETDHKFNLTG------AITFSGTRPSA-FLSGVKAQLE 164
           G GPGLY D+G + RD LY DY++DHKF +T       AIT +G +    FL+ + +QL+
Sbjct: 2   GKGPGLYFDIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSTGIKKGELFLADISSQLK 61

Query: 165 KDNVTADIKVDATHRLFGSITVNEPAPGLKTIFSFVAPDQSSGVVKLEYQYDNIGISTSI 344
             N+T D+KVD    L  +IT++EPAPGLKTIFSF  PDQ SG V+L+YQ++  GISTS+
Sbjct: 62  NKNITTDVKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSL 121

Query: 345 GLVANPIVTFSGVVGRKKLSVGTDISFDTAARNFIKCDVGLSVSYKNFSTSLILNDKFHT 524
           GL ANPIV FSGVVG   +++GTD+SFDTA  NF KC+ GLS +  +   SL +NDK  T
Sbjct: 122 GLTANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTVNDKGDT 181

Query: 525 LKSSLRCILSHHTKTAIGYEIAVYFSTNTAIVTIGTQHKLDPLTMVKARINNHGKASASI 704
           L +S    +S  T TA+G E+   FS+N  I+TIGTQH LDPLT VKAR+NN+GK SA I
Sbjct: 182 LSASYYHTVSPLTSTAVGAELTHSFSSNENILTIGTQHALDPLTTVKARLNNYGKVSALI 241

Query: 705 QRELRPKCAFSIFGEVNLWAAERRAKVGLAL 797
           Q E RPK  F+I GEV+  A E+ AKVGLAL
Sbjct: 242 QNEWRPKSLFTISGEVDTKAIEKSAKVGLAL 272


>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
           gi|449523227|ref|XP_004168625.1| PREDICTED:
           mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
          Length = 276

 Score =  281 bits (718), Expect = 2e-73
 Identities = 152/271 (56%), Positives = 186/271 (68%), Gaps = 7/271 (2%)
 Frame = +3

Query: 6   GLGPGLYTDLGNECRDFLYTDYETDHKFNLTG------AITFSGTRPS-AFLSGVKAQLE 164
           G GPGLY+D+G   RD LY DY++DHKF +T       AIT SGT+    FL+ V  QL+
Sbjct: 2   GKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLK 61

Query: 165 KDNVTADIKVDATHRLFGSITVNEPAPGLKTIFSFVAPDQSSGVVKLEYQYDNIGISTSI 344
             N+T DIKVD +  L  +ITV+EPAPGLK IFSF  PDQ SG V+L+Y +D  GISTSI
Sbjct: 62  NKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSI 121

Query: 345 GLVANPIVTFSGVVGRKKLSVGTDISFDTAARNFIKCDVGLSVSYKNFSTSLILNDKFHT 524
           GL ANPIV FSGVVG   L++GTD+SFDT   NF K + GLS +  +   SL LNDK  T
Sbjct: 122 GLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTLNDKGDT 181

Query: 525 LKSSLRCILSHHTKTAIGYEIAVYFSTNTAIVTIGTQHKLDPLTMVKARINNHGKASASI 704
           L +S    ++  T TA+G E+A  FS+N   +T+GTQH LDPLT VKAR+NN GKASA I
Sbjct: 182 LSASYYHTVNPLTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKARVNNFGKASALI 241

Query: 705 QRELRPKCAFSIFGEVNLWAAERRAKVGLAL 797
           Q E RPK  F++ GEV+  A E+ AKVGLAL
Sbjct: 242 QHEWRPKSFFTVSGEVDTKAIEKSAKVGLAL 272


>gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
          Length = 276

 Score =  280 bits (716), Expect = 3e-73
 Identities = 147/269 (54%), Positives = 189/269 (70%), Gaps = 7/269 (2%)
 Frame = +3

Query: 12  GPGLYTDLGNECRDFLYTDYETDHKFNLTG------AITFSGTRPS-AFLSGVKAQLEKD 170
           GPGLY D+G + RD LY DY++DHKF +T       AI+ +G R    +L  V  QL+  
Sbjct: 4   GPGLYLDIGKKARDLLYKDYQSDHKFTVTTYTSTGVAISSTGIRKGDLYLGDVSTQLKNK 63

Query: 171 NVTADIKVDATHRLFGSITVNEPAPGLKTIFSFVAPDQSSGVVKLEYQYDNIGISTSIGL 350
           N+T D+KVD    L  +IT++EPAPGLK IFSF+ PDQ SG V+L+YQ++  GISTSIGL
Sbjct: 64  NITTDVKVDTDSNLRTTITIDEPAPGLKAIFSFIVPDQRSGKVELQYQHEYAGISTSIGL 123

Query: 351 VANPIVTFSGVVGRKKLSVGTDISFDTAARNFIKCDVGLSVSYKNFSTSLILNDKFHTLK 530
            ANPIV FSGVVG   LS+GTD+SFDTA+ NF KC+ GL+ ++ +   SLILNDK  T+ 
Sbjct: 124 TANPIVNFSGVVGNNLLSLGTDLSFDTASGNFTKCNAGLNFTHTDLIASLILNDKADTVT 183

Query: 531 SSLRCILSHHTKTAIGYEIAVYFSTNTAIVTIGTQHKLDPLTMVKARINNHGKASASIQR 710
           +S    +S  T TA+G E++  FS+N   +TIGTQH LDPLT VK R+NN+G+ASA IQ 
Sbjct: 184 ASYYHTVSPLTNTAVGAELSHSFSSNENSLTIGTQHALDPLTTVKGRVNNYGRASALIQH 243

Query: 711 ELRPKCAFSIFGEVNLWAAERRAKVGLAL 797
           E RPK  F+I GEV+  A E+ AK+GLAL
Sbjct: 244 EWRPKSFFTISGEVDTRAIEKSAKIGLAL 272


>ref|XP_002520135.1| voltage-dependent anion-selective channel, putative [Ricinus
           communis] gi|223540627|gb|EEF42190.1| voltage-dependent
           anion-selective channel, putative [Ricinus communis]
          Length = 276

 Score =  279 bits (714), Expect = 6e-73
 Identities = 149/271 (54%), Positives = 190/271 (70%), Gaps = 7/271 (2%)
 Frame = +3

Query: 6   GLGPGLYTDLGNECRDFLYTDYETDHKFNLTG------AITFSGTRPSA-FLSGVKAQLE 164
           G GPGLYTD+G + RD LY DY+ DHKF +T       AIT +G +    +L  + +QL+
Sbjct: 2   GKGPGLYTDIGKKARDLLYKDYQGDHKFTVTTYTSTGVAITSTGIKKGEIYLGDITSQLK 61

Query: 165 KDNVTADIKVDATHRLFGSITVNEPAPGLKTIFSFVAPDQSSGVVKLEYQYDNIGISTSI 344
             N+T DIKVD +  +  +ITV+EPAPGLKTIFSF  PDQ SG V+L+YQ+++ GISTSI
Sbjct: 62  NKNITTDIKVDTSSNVSTTITVDEPAPGLKTIFSFKIPDQRSGKVELQYQHEHAGISTSI 121

Query: 345 GLVANPIVTFSGVVGRKKLSVGTDISFDTAARNFIKCDVGLSVSYKNFSTSLILNDKFHT 524
           GL ANPIV FSGV+G   +++GTD+SFDTA+ NF K + GLS S  +   SL LNDK  T
Sbjct: 122 GLTANPIVNFSGVIGSSAVALGTDLSFDTASGNFTKLNAGLSYSNTDLIASLTLNDKGDT 181

Query: 525 LKSSLRCILSHHTKTAIGYEIAVYFSTNTAIVTIGTQHKLDPLTMVKARINNHGKASASI 704
           L +S   I+S  T TA+G E+   FS+N   +T GTQH LDPLT VKAR+N++GKASA I
Sbjct: 182 LNASYYHIVSPLTNTAVGAELTHSFSSNENTLTFGTQHALDPLTTVKARVNSYGKASALI 241

Query: 705 QRELRPKCAFSIFGEVNLWAAERRAKVGLAL 797
           Q E RPK  F+I GEV+  A E+ AK+GLAL
Sbjct: 242 QHEWRPKSLFTISGEVDTRAIEKSAKIGLAL 272


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