BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019613
         (1440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containi...   305   3e-80
ref|XP_003516576.1| PREDICTED: pentatricopeptide repeat-containi...   301   4e-79
gb|AFK36371.1| unknown [Lotus japonicus]                              298   2e-78
emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]   292   2e-76
ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containi...   290   6e-76

>ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
            [Glycine max]
          Length = 388

 Score =  305 bits (780), Expect = 3e-80
 Identities = 158/264 (59%), Positives = 186/264 (70%), Gaps = 9/264 (3%)
 Frame = +2

Query: 461  GNDDEDDNTVEHQRSPFLGSSTKSTTTDRDG--AGESFLEKFKLGFEGKD-------EQN 613
            G  DE D T +  +      +T    T+RD   +G+SFL KFKLGF+ K           
Sbjct: 123  GGPDELDQTNKSSKIDLAFQNTNVAKTNRDAGQSGDSFLNKFKLGFDDKTVNLSEVAASK 182

Query: 614  PQQDTXXXXXXXXXXXXXXXDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGL 793
              ++                DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQ+A+KLFGL
Sbjct: 183  QSEEAKRSNPNQPAQESMPQDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGL 242

Query: 794  MREKGTIPEVVIYTAVIEGFCKAHKFDDAKRIFRKMQSNGISPNAFSYTVLVQGLCNGRS 973
            MREKGTIPE+VIYTAV+EG+ KAHK DDAKRIFRKMQS+G+SPNAFSY VL+QGL     
Sbjct: 243  MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSSGVSPNAFSYMVLIQGLYKCSR 302

Query: 974  LEDAVDFSIEMMEAGHSPNVATFTKLIDGFCKDKGVEEAESIVRRLREKGYFVNEKAVGD 1153
            L DA +F +EM+EAGHSPNV TF  L+DGFC +KGVEEA+S ++ L +KG+ VNEKAV  
Sbjct: 303  LHDAFEFCVEMLEAGHSPNVTTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQ 362

Query: 1154 HLDKKGRFSPLVWEAIFGKKRSQK 1225
             LDKK  FSP VWEAIFGKK  Q+
Sbjct: 363  FLDKKAPFSPSVWEAIFGKKAPQR 386


>ref|XP_003516576.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
            [Glycine max]
          Length = 397

 Score =  301 bits (770), Expect = 4e-79
 Identities = 161/276 (58%), Positives = 189/276 (68%), Gaps = 12/276 (4%)
 Frame = +2

Query: 434  HLFSSKLDF---GNDDEDDNTVEHQRSPFLGSSTKSTTTDRD--GAGESFLEKFKLGFEG 598
            H F  + D    G D+ D      Q       +T    T+RD   +G SFL+KFKLGF+ 
Sbjct: 120  HSFPPRFDDNHGGPDELDKINKSSQIDLAFQGTTNVAETNRDVGKSGGSFLDKFKLGFDD 179

Query: 599  KD-------EQNPQQDTXXXXXXXXXXXXXXXDADEIFKKMKETGLIPNAVAMLDGLCKD 757
            K             ++                DA+EIFKKMKETGLIPNAVAMLDGLCKD
Sbjct: 180  KTVNLSEVAASKQSEEAKRSNPNQPAQESMPQDANEIFKKMKETGLIPNAVAMLDGLCKD 239

Query: 758  GLVQDAMKLFGLMREKGTIPEVVIYTAVIEGFCKAHKFDDAKRIFRKMQSNGISPNAFSY 937
            GLVQ+A+KLFGL+REKGTIPE+VIYTAV+EG+ KAHK DDAKRIFRKMQS+GISPNAFSY
Sbjct: 240  GLVQEALKLFGLIREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSSGISPNAFSY 299

Query: 938  TVLVQGLCNGRSLEDAVDFSIEMMEAGHSPNVATFTKLIDGFCKDKGVEEAESIVRRLRE 1117
            TVL+QGL     L DA +F +EM+EAGHSPNV  F  L+DGFC +KGVEEA+S ++ L E
Sbjct: 300  TVLIQGLYKCNRLHDAFEFCVEMLEAGHSPNVTAFVGLVDGFCNEKGVEEAKSAIKTLTE 359

Query: 1118 KGYFVNEKAVGDHLDKKGRFSPLVWEAIFGKKRSQK 1225
            KG+ VNEKAVG  LDKK  FSP VWEAIFGKK  Q+
Sbjct: 360  KGFVVNEKAVGQFLDKKAPFSPSVWEAIFGKKAPQR 395


>gb|AFK36371.1| unknown [Lotus japonicus]
          Length = 372

 Score =  298 bits (763), Expect = 2e-78
 Identities = 158/257 (61%), Positives = 181/257 (70%), Gaps = 4/257 (1%)
 Frame = +2

Query: 464  NDDEDDNTVEHQRSPFLGSSTKSTTTDRDGAGESFLEKFKLGFEGK----DEQNPQQDTX 631
            +D E  N        F G +   T    +  G+SFL+KFKLGF+ K     E      + 
Sbjct: 113  DDVEMTNKSSQTDIGFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSE 172

Query: 632  XXXXXXXXXXXXXXDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMREKGT 811
                          DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQ+A+KLFGLMREKGT
Sbjct: 173  EAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGT 232

Query: 812  IPEVVIYTAVIEGFCKAHKFDDAKRIFRKMQSNGISPNAFSYTVLVQGLCNGRSLEDAVD 991
            IPE+VIYTAV+EG+ KAHK DDAKRIFRKMQSNGISPNAFSYTVLVQGLC    L+DA +
Sbjct: 233  IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 292

Query: 992  FSIEMMEAGHSPNVATFTKLIDGFCKDKGVEEAESIVRRLREKGYFVNEKAVGDHLDKKG 1171
            F +EM+EAGHSPN+ TF  L+DGF K++GV EA+  +R L EKG+ VNEKAV   LD K 
Sbjct: 293  FCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKK 352

Query: 1172 RFSPLVWEAIFGKKRSQ 1222
             FSP VWEAIFGKK  Q
Sbjct: 353  PFSPSVWEAIFGKKAPQ 369


>emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]
          Length = 381

 Score =  292 bits (747), Expect = 2e-76
 Identities = 158/268 (58%), Positives = 191/268 (71%), Gaps = 4/268 (1%)
 Frame = +2

Query: 434  HLFSSKLDFGNDDEDDNTVEHQRSPFLGSST--KSTTTDRDGAGESFLEKFKLGFEGKD- 604
            H+   KL    D+  D     Q SPF   S   K   T  DG    FLE+FKLG + K+ 
Sbjct: 118  HIPQRKLGLPKDEGVDRA--SQASPFNQPSPAEKVGATLEDG----FLERFKLGVQKKER 171

Query: 605  -EQNPQQDTXXXXXXXXXXXXXXXDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMK 781
             +++                    +ADEIF+KMKE+GLIPNAVAMLDGLCKDGLVQ+AMK
Sbjct: 172  PQESAAAQPSREQDANHGKEQPPQNADEIFRKMKESGLIPNAVAMLDGLCKDGLVQEAMK 231

Query: 782  LFGLMREKGTIPEVVIYTAVIEGFCKAHKFDDAKRIFRKMQSNGISPNAFSYTVLVQGLC 961
            LFGLMREKGTIPEVVIYTAV+EGFCKA + DDA RIFRKMQ+NGISPNAFSYTVL++G+ 
Sbjct: 232  LFGLMREKGTIPEVVIYTAVVEGFCKARQLDDAVRIFRKMQNNGISPNAFSYTVLIRGMY 291

Query: 962  NGRSLEDAVDFSIEMMEAGHSPNVATFTKLIDGFCKDKGVEEAESIVRRLREKGYFVNEK 1141
             G  L+ AVDF +EM+EAGHSPNVAT   LI  FCK+KGVEEA++++  L++KG FV++K
Sbjct: 292  KGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEAKNVIVTLKQKGLFVDDK 351

Query: 1142 AVGDHLDKKGRFSPLVWEAIFGKKRSQK 1225
            AV ++LDKKG  SPLVWEA FGKK  Q+
Sbjct: 352  AVREYLDKKGPQSPLVWEAFFGKKSPQR 379


>ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
            [Vitis vinifera]
          Length = 380

 Score =  290 bits (742), Expect = 6e-76
 Identities = 157/268 (58%), Positives = 191/268 (71%), Gaps = 4/268 (1%)
 Frame = +2

Query: 434  HLFSSKLDFGNDDEDDNTVEHQRSPFLGSST--KSTTTDRDGAGESFLEKFKLGFEGKD- 604
            H+   KL    D+  D     Q SPF   S   K   T  DG    FLE+FKLG + K+ 
Sbjct: 117  HIPQRKLGLPKDEGVDRA--SQASPFNQPSPAEKVGATLEDG----FLERFKLGVQKKER 170

Query: 605  -EQNPQQDTXXXXXXXXXXXXXXXDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMK 781
             +++                    +ADEIF+KMKE+GLIPNAVAMLDGLCKDGLVQ+AMK
Sbjct: 171  PQESAAAQPSREQDANHGKEQPPQNADEIFRKMKESGLIPNAVAMLDGLCKDGLVQEAMK 230

Query: 782  LFGLMREKGTIPEVVIYTAVIEGFCKAHKFDDAKRIFRKMQSNGISPNAFSYTVLVQGLC 961
            LFGLMREKGTIPEVVIYTAV+EGFCKA + +DA RIFRKMQ+NGISPNAFSYTVL++G+ 
Sbjct: 231  LFGLMREKGTIPEVVIYTAVVEGFCKARQLNDAVRIFRKMQNNGISPNAFSYTVLIRGMY 290

Query: 962  NGRSLEDAVDFSIEMMEAGHSPNVATFTKLIDGFCKDKGVEEAESIVRRLREKGYFVNEK 1141
             G  L+ AVDF +EM+EAGHSPNVAT   LI  FCK+KGVEEA++++  L++KG FV++K
Sbjct: 291  KGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEAKNVIVTLKQKGLFVDDK 350

Query: 1142 AVGDHLDKKGRFSPLVWEAIFGKKRSQK 1225
            AV ++LDKKG  SPLVWEA FGKK  Q+
Sbjct: 351  AVREYLDKKGPQSPLVWEAFFGKKSPQR 378