BLASTX nr result

ID: Cimicifuga21_contig00019593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019593
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256...   105   4e-21
emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]   105   4e-21
ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_003601396.1| Membrane protein, putative [Medicago truncat...   100   1e-19
gb|AFK44808.1| unknown [Lotus japonicus]                               93   2e-17

>ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera]
           gi|297739206|emb|CBI28857.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/90 (56%), Positives = 64/90 (71%)
 Frame = -1

Query: 411 DLVMPDISSFLLMVILGVLAFFAEVLLARGLQLERTARVTNMHYTEPFLLLIWNFISSRV 232
           D V+P   SF LMVIL VLAFFAEV LARGLQLE+T++ TN+ Y E  L  +W   SS++
Sbjct: 301 DFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSKATNIQYIEAALSQLWGLGSSKI 360

Query: 231 TPSIGGVFGSLLILASICRTIYYGPEKEIE 142
            PS G + G  LI AS C T+Y+GP+KE+E
Sbjct: 361 APSFGRLVGCFLIFASTCCTMYFGPDKEME 390


>emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]
          Length = 413

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/90 (56%), Positives = 64/90 (71%)
 Frame = -1

Query: 411 DLVMPDISSFLLMVILGVLAFFAEVLLARGLQLERTARVTNMHYTEPFLLLIWNFISSRV 232
           D V+P   SF LMVIL VLAFFAEV LARGLQLE+T++ TN+ Y E  L  +W   SS++
Sbjct: 324 DFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSKATNIQYIEAALSQLWGLGSSKI 383

Query: 231 TPSIGGVFGSLLILASICRTIYYGPEKEIE 142
            PS G + G  LI AS C T+Y+GP+KE+E
Sbjct: 384 APSFGRLVGCFLIFASTCCTMYFGPDKEME 413


>ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/90 (54%), Positives = 65/90 (72%)
 Frame = -1

Query: 411 DLVMPDISSFLLMVILGVLAFFAEVLLARGLQLERTARVTNMHYTEPFLLLIWNFISSRV 232
           + V+P+  +F LM+ILG+L+F AEV  ARGLQLE+T++  N+ Y E  L  +W   S R+
Sbjct: 304 EFVLPNFYTFFLMLILGLLSFSAEVFFARGLQLEKTSKAANVLYMEVALSQLWGIGSWRI 363

Query: 231 TPSIGGVFGSLLILASICRTIYYGPEKEIE 142
           TPS GG+ G LLIL S+C TIY GPEKE+E
Sbjct: 364 TPSFGGLVGCLLILISVCCTIYIGPEKEME 393


>ref|XP_003601396.1| Membrane protein, putative [Medicago truncatula]
           gi|355490444|gb|AES71647.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 475

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/90 (53%), Positives = 64/90 (71%)
 Frame = -1

Query: 411 DLVMPDISSFLLMVILGVLAFFAEVLLARGLQLERTARVTNMHYTEPFLLLIWNFISSRV 232
           D V+P + S LLMV+LG+LAFFAEVLLARGLQLER  +V N+ Y E  L   W+   + V
Sbjct: 386 DFVLPTVQSILLMVVLGILAFFAEVLLARGLQLERMGKVANIQYMEAALTQFWSLTLTLV 445

Query: 231 TPSIGGVFGSLLILASICRTIYYGPEKEIE 142
           +P+   + G LLI+ S+C T+Y GP+KE+E
Sbjct: 446 SPAFDHLVGILLIVVSVCCTMYIGPDKEME 475


>gb|AFK44808.1| unknown [Lotus japonicus]
          Length = 203

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/90 (51%), Positives = 62/90 (68%)
 Frame = -1

Query: 411 DLVMPDISSFLLMVILGVLAFFAEVLLARGLQLERTARVTNMHYTEPFLLLIWNFISSRV 232
           D V+P     +LM++LG+LAFFAEVLLARGLQLE+T +V N+ Y E  L   W+   +RV
Sbjct: 114 DFVLPGFQPTVLMLVLGILAFFAEVLLARGLQLEKTGKVANILYIEAALTQFWSLAFTRV 173

Query: 231 TPSIGGVFGSLLILASICRTIYYGPEKEIE 142
            PS   + G LLI+ S+  T+Y GP+KE+E
Sbjct: 174 APSFDHLVGILLIVISVGFTLYIGPDKEME 203


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