BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019590
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   232   8e-59
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...   231   2e-58
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi...   231   2e-58
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   206   6e-51
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...   195   1e-47

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  232 bits (592), Expect = 8e-59
 Identities = 118/210 (56%), Positives = 155/210 (73%), Gaps = 7/210 (3%)
 Frame = +3

Query: 318 KEQRSKSQWNFIRTLHPNGFSPREVSEIILRIKNNPRLALRFFLWSEKRSLCTHDLLSYS 497
           + QRSKS+W+ +++L P GF+P E S+I+L+IKNNP LAL FFLW   +SLC H LLSYS
Sbjct: 45  RHQRSKSRWSHLQSLFPKGFTPTEASQIVLQIKNNPHLALSFFLWCHHKSLCNHTLLSYS 104

Query: 498 TIIHILSRSRLKTLAQTLIQTAIRVSEVNNIEDLSLKPPKIFETLTKTYRYCDSAPFVFD 677
           TIIHIL+R+RLK+ A  LI+TAIRV   ++ ++ S +PPKIFE+L KTY  C SAPFVFD
Sbjct: 105 TIIHILARARLKSQALGLIRTAIRV--FDDSDECSSQPPKIFESLVKTYNSCGSAPFVFD 162

Query: 678 LLIRACLQAKKIDRTVEIVWMLRSQGIYPTIGTCNLLIRTVSQLRGSDACLSVYREIFSL 857
           LLI+ACL +K+I++++ IV MLRS+GI PTI TCN LI  VS+ RG DA   +YRE+F  
Sbjct: 163 LLIKACLNSKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYEIYREVFGS 222

Query: 858 DEDSAS-------RIRARLSPNIQTFNTLM 926
            +D  +       R+R R+ PN+ TFN LM
Sbjct: 223 WDDEINEKVRVRVRVRVRVCPNVHTFNALM 252


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  231 bits (588), Expect = 2e-58
 Identities = 113/211 (53%), Positives = 159/211 (75%), Gaps = 10/211 (4%)
 Frame = +3

Query: 324 QRSKSQWNFIRTLHPNGFSPREVSEIILRIKNNPRLALRFFLWSEKRSLCTHDLLSYSTI 503
           QRSKS+W F+ +L PNGF P E S+I+L+IKNNP LALRFFLW++ +SLC H+L+SYST+
Sbjct: 53  QRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTL 112

Query: 504 IHILSRSRLKTLAQTLIQTAIRVSEVNNIEDLS-------LKPPKIFETLTKTYRYCDSA 662
           IHIL+R RL+T A+ +IQTAIR +++ + ++ S        +P K+FETL KTY+ C SA
Sbjct: 113 IHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSA 172

Query: 663 PFVFDLLIRACLQAKKIDRTVEIVWMLRSQGIYPTIGTCNLLIRTVSQLRGSDACLSVYR 842
           PFVFDLLI+A L +KK+D ++EIV MLRS+GI P + T N LI  VS+ +G++   +++R
Sbjct: 173 PFVFDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFR 232

Query: 843 EIFSLD---EDSASRIRARLSPNIQTFNTLM 926
           E+F LD   E+   +++ R+SPN+ TFNTLM
Sbjct: 233 EVFGLDCEIEEEHVKLKGRVSPNVHTFNTLM 263


>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
           gi|449472579|ref|XP_004153637.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  231 bits (588), Expect = 2e-58
 Identities = 113/211 (53%), Positives = 159/211 (75%), Gaps = 10/211 (4%)
 Frame = +3

Query: 324 QRSKSQWNFIRTLHPNGFSPREVSEIILRIKNNPRLALRFFLWSEKRSLCTHDLLSYSTI 503
           QRSKS+W F+ +L PNGF P E S+I+L+IKNNP LALRFFLW++ +SLC H+L+SYST+
Sbjct: 53  QRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTL 112

Query: 504 IHILSRSRLKTLAQTLIQTAIRVSEVNNIEDLS-------LKPPKIFETLTKTYRYCDSA 662
           IHIL+R RL+T A+ +IQTAIR +++ + ++ S        +P K+FETL KTY+ C SA
Sbjct: 113 IHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSA 172

Query: 663 PFVFDLLIRACLQAKKIDRTVEIVWMLRSQGIYPTIGTCNLLIRTVSQLRGSDACLSVYR 842
           PFVFDLLI+A L +KK+D ++EIV MLRS+GI P + T N LI  VS+ +G++   +++R
Sbjct: 173 PFVFDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFR 232

Query: 843 EIFSLD---EDSASRIRARLSPNIQTFNTLM 926
           E+F LD   E+   +++ R+SPN+ TFNTLM
Sbjct: 233 EVFGLDCEIEEEHVKLKGRVSPNVHTFNTLM 263


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  206 bits (524), Expect = 6e-51
 Identities = 108/206 (52%), Positives = 146/206 (70%), Gaps = 6/206 (2%)
 Frame = +3

Query: 327 RSKSQWNFIRTLHPNGFSPREVSEIILRIKNNPRLALRFFLWSEKRSLCTHDLLSYSTII 506
           RSKS+W+ +R+  PNG +P E SEI L IKN P+LALRFFLW++ +SLC H+L SYS+II
Sbjct: 46  RSKSRWSNLRSACPNGITPAEFSEITLHIKNKPQLALRFFLWTKSKSLCNHNLASYSSII 105

Query: 507 HILSRSRLKTLAQTLIQTAIRVSEVNNIED--LSLKPPKIFETLTKTYRYCDSAPFVFDL 680
           H+L+R+RL + A  LI+TAIR S  N+ E+   + +P  +FETL KTYR   SAPFVFDL
Sbjct: 106 HLLARARLSSHAYDLIRTAIRASHQNDEENCRFNSRPLNLFETLVKTYRDSGSAPFVFDL 165

Query: 681 LIRACLQAKKIDRTVEIVWMLRSQGIYPTIGTCNLLIRTVSQLRGSDACLSVYREIFSLD 860
           LI+ACL +KK+D ++EIV ML S+GI P + T N LI  V + RG D   ++YRE F LD
Sbjct: 166 LIKACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAIYREFFRLD 225

Query: 861 EDSASRIRA----RLSPNIQTFNTLM 926
           E++    +     R++PN+ T+N LM
Sbjct: 226 EENNEISKRGSGFRVTPNVHTYNDLM 251


>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score =  195 bits (495), Expect = 1e-47
 Identities = 100/203 (49%), Positives = 143/203 (70%), Gaps = 3/203 (1%)
 Frame = +3

Query: 327 RSKSQWNFIRTLHPNGFSPREVSEIILRIKNNPRLALRFFLWSEKRSLCTHDLLSYSTII 506
           RSKS+W+ +R+L P+GF+P + SEI L ++NNP L+LRFFL++ + SLC+HD  S ST+I
Sbjct: 53  RSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLI 112

Query: 507 HILSRSRLKTLAQTLIQTAIRVSEVNNIEDLSLKPPKIFETLTKTYRYCDSAPFVFDLLI 686
           HILSRSRLK+ A  +I+ A+R++  +  ED  L   K+F +L K+Y  C SAPFVFDLLI
Sbjct: 113 HILSRSRLKSHASEIIRLALRLAATDEDEDRVL---KVFRSLIKSYNRCGSAPFVFDLLI 169

Query: 687 RACLQAKKIDRTVEIVWMLRSQGIYPTIGTCNLLIRTVSQLRGSDACLSVYREIFSLDE- 863
           ++CL +K+ID  V ++  LRS+GI   I TCN LI  VS+ RG+     +YRE+F LD+ 
Sbjct: 170 KSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDV 229

Query: 864 --DSASRIRARLSPNIQTFNTLM 926
             D A ++  ++ PN  TFN++M
Sbjct: 230 SVDEAKKMIGKIKPNATTFNSMM 252