BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019516
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   263   1e-68
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   252   3e-65
ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferas...   249   2e-64
ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methy...   248   3e-64
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...   248   4e-64

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
           vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
           product [Vitis vinifera]
          Length = 335

 Score =  263 bits (672), Expect = 1e-68
 Identities = 135/154 (87%), Positives = 144/154 (93%)
 Frame = +2

Query: 2   STDVVKQLLPMGDIFSEVVLLLQDETAMRLVDASLRTSEYRPINIFVNFYSDPEYKFQVL 181
           STDVVK LLPMGDIFSEVVLLLQDETA+RLV+ASLRT EYRPINIFVNFYSDPEYKF+V 
Sbjct: 181 STDVVKILLPMGDIFSEVVLLLQDETALRLVEASLRTQEYRPINIFVNFYSDPEYKFKVP 240

Query: 182 RTNFFPQPNVDAAVVVFKLKQPNDYPAVTSSKSFFSLVNSAFNGKRKMLRRSLQHISTSL 361
           RTNFFPQPNVDAAVVVFKLKQ  DYP V+S KSFFSLVNSAFNGKRKMLRRSLQHI TS+
Sbjct: 241 RTNFFPQPNVDAAVVVFKLKQAVDYPPVSSIKSFFSLVNSAFNGKRKMLRRSLQHICTSI 300

Query: 362 EIEKALGSVGVSATARPEELTLDDFVRLHNLIVK 463
           EIE+AL +VG+ AT+RPEELTLDDFVRLHNLIVK
Sbjct: 301 EIEEALRNVGLPATSRPEELTLDDFVRLHNLIVK 334


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
           gi|223548969|gb|EEF50458.1| dimethyladenosine
           transferase, putative [Ricinus communis]
          Length = 338

 Score =  252 bits (643), Expect = 3e-65
 Identities = 128/154 (83%), Positives = 141/154 (91%)
 Frame = +2

Query: 2   STDVVKQLLPMGDIFSEVVLLLQDETAMRLVDASLRTSEYRPINIFVNFYSDPEYKFQVL 181
           STDVVKQLLPMGDI SEV LLLQ+ETA RLV++SLRTSEYRPIN+FVNFYSDP YKF+V 
Sbjct: 184 STDVVKQLLPMGDIISEVALLLQEETASRLVESSLRTSEYRPINVFVNFYSDPVYKFKVP 243

Query: 182 RTNFFPQPNVDAAVVVFKLKQPNDYPAVTSSKSFFSLVNSAFNGKRKMLRRSLQHISTSL 361
           R+NFFPQPNVDAAVV FKLKQ  DYPAV+SSKSFFSLVNSAFNGKRKMLRRSLQHI TS 
Sbjct: 244 RSNFFPQPNVDAAVVTFKLKQTADYPAVSSSKSFFSLVNSAFNGKRKMLRRSLQHICTSP 303

Query: 362 EIEKALGSVGVSATARPEELTLDDFVRLHNLIVK 463
           EIE+AL +VG+ AT+RPEELTLDDFV+LHNLI +
Sbjct: 304 EIEQALINVGLPATSRPEELTLDDFVKLHNLIAR 337


>ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferase A [Medicago
           truncatula] gi|124360236|gb|ABN08249.1| SAM (and some
           other nucleotide) binding motif [Medicago truncatula]
           gi|124360864|gb|ABN08836.1| SAM (and some other
           nucleotide) binding motif [Medicago truncatula]
           gi|355498861|gb|AES80064.1| Ribosomal RNA small subunit
           methyltransferase A [Medicago truncatula]
          Length = 349

 Score =  249 bits (635), Expect = 2e-64
 Identities = 123/154 (79%), Positives = 141/154 (91%)
 Frame = +2

Query: 2   STDVVKQLLPMGDIFSEVVLLLQDETAMRLVDASLRTSEYRPINIFVNFYSDPEYKFQVL 181
           STDV+K LLPMGDIFSEVVLLLQ+ETA+R V+ SLRT EYRPINIFVNFYSDPEYKF+V 
Sbjct: 195 STDVIKLLLPMGDIFSEVVLLLQEETALRWVEPSLRTPEYRPINIFVNFYSDPEYKFKVA 254

Query: 182 RTNFFPQPNVDAAVVVFKLKQPNDYPAVTSSKSFFSLVNSAFNGKRKMLRRSLQHISTSL 361
           RTNFFPQPNVDAAVV FKLKQP++YP V+S+KSFFS+VNSAFN KRKM+R+SLQHI TSL
Sbjct: 255 RTNFFPQPNVDAAVVSFKLKQPSEYPQVSSNKSFFSMVNSAFNEKRKMIRKSLQHICTSL 314

Query: 362 EIEKALGSVGVSATARPEELTLDDFVRLHNLIVK 463
           EIE+AL S+G+ +T+RPEELTLDDFV+LHN I K
Sbjct: 315 EIEEALESIGLLSTSRPEELTLDDFVKLHNSITK 348


>ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Cucumis sativus]
          Length = 347

 Score =  248 bits (634), Expect = 3e-64
 Identities = 124/154 (80%), Positives = 140/154 (90%)
 Frame = +2

Query: 2   STDVVKQLLPMGDIFSEVVLLLQDETAMRLVDASLRTSEYRPINIFVNFYSDPEYKFQVL 181
           STD++KQLLPMGDIFSEVVLLLQ+E A+RLV+ SLRTSEYRPIN+FVNFYSDPE KF+V 
Sbjct: 193 STDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINVFVNFYSDPELKFKVP 252

Query: 182 RTNFFPQPNVDAAVVVFKLKQPNDYPAVTSSKSFFSLVNSAFNGKRKMLRRSLQHISTSL 361
           RTNFFPQPNVDAAVV FKLK+  DYPAV+S+KSFFS+VNSAFNGKRKMLR+SLQHI TSL
Sbjct: 253 RTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSL 312

Query: 362 EIEKALGSVGVSATARPEELTLDDFVRLHNLIVK 463
           EIEKAL    +  T+RPEEL+LDDFV+LHNLIVK
Sbjct: 313 EIEKALEDSSLLPTSRPEELSLDDFVKLHNLIVK 346


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score =  248 bits (633), Expect = 4e-64
 Identities = 124/154 (80%), Positives = 141/154 (91%)
 Frame = +2

Query: 2   STDVVKQLLPMGDIFSEVVLLLQDETAMRLVDASLRTSEYRPINIFVNFYSDPEYKFQVL 181
           STDV+K LLPMGDIFSEVVLLLQ+ETA+RLV +SLRT EYRPIN+FVNFYSDPEYK +V 
Sbjct: 187 STDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRPINVFVNFYSDPEYKLEVP 246

Query: 182 RTNFFPQPNVDAAVVVFKLKQPNDYPAVTSSKSFFSLVNSAFNGKRKMLRRSLQHISTSL 361
           RTNFFPQPNVDAAVV FKLK P++YP V+S+KSFFS+VNSAFN KRKMLR+SLQHI TSL
Sbjct: 247 RTNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEKRKMLRKSLQHICTSL 306

Query: 362 EIEKALGSVGVSATARPEELTLDDFVRLHNLIVK 463
           EIE+AL S+G+ AT+RPEELTLDDFV+LHNLI K
Sbjct: 307 EIEEALTSIGLLATSRPEELTLDDFVKLHNLIAK 340