BLASTX nr result

ID: Cimicifuga21_contig00019504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019504
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagell...   166   2e-39
ref|XP_003609697.1| Dynein light chain 1 cytoplasmic-like protei...   162   3e-38
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   161   7e-38
ref|XP_004150499.1| PREDICTED: dynein light chain 1, cytoplasmic...   160   1e-37
ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic...   160   2e-37

>ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagellar outer arm [Vitis
           vinifera] gi|147857576|emb|CAN81003.1| hypothetical
           protein VITISV_006994 [Vitis vinifera]
          Length = 117

 Score =  166 bits (421), Expect = 2e-39
 Identities = 77/91 (84%), Positives = 85/91 (93%)
 Frame = +3

Query: 150 STGAKKKVIIKSADMKDDVQKEAIDCALSAVEKHSVEKDIAEFIKKEFDKKHGPTWHCIV 329
           +  A K+VIIKSADMKDD+QKEAID A++A E HSVEK+IAE+IKKEFDKKHGPTWHCIV
Sbjct: 27  AASASKRVIIKSADMKDDMQKEAIDIAIAASENHSVEKNIAEYIKKEFDKKHGPTWHCIV 86

Query: 330 GRNFGSYVTHETNHFVYFYLDQKAILLFKSG 422
           GRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 87  GRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117


>ref|XP_003609697.1| Dynein light chain 1 cytoplasmic-like protein [Medicago truncatula]
           gi|355510752|gb|AES91894.1| Dynein light chain 1
           cytoplasmic-like protein [Medicago truncatula]
           gi|388518223|gb|AFK47173.1| unknown [Medicago
           truncatula]
          Length = 130

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/92 (81%), Positives = 84/92 (91%)
 Frame = +3

Query: 147 PSTGAKKKVIIKSADMKDDVQKEAIDCALSAVEKHSVEKDIAEFIKKEFDKKHGPTWHCI 326
           P+T A KKVIIKSADM  D+QKEA+D A+ A E+H+VEKD+AE IKKEFDK+HGPTWHCI
Sbjct: 39  PATPATKKVIIKSADMLPDMQKEAVDIAVVAFERHNVEKDVAETIKKEFDKRHGPTWHCI 98

Query: 327 VGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 422
           VGRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 99  VGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 130


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  161 bits (407), Expect = 7e-38
 Identities = 72/86 (83%), Positives = 83/86 (96%)
 Frame = +3

Query: 165 KKVIIKSADMKDDVQKEAIDCALSAVEKHSVEKDIAEFIKKEFDKKHGPTWHCIVGRNFG 344
           KK+IIK+ADMKDD+QKEA+D A++A E+++VEKD+AE IKKEFDKKHGPTWHCIVGRNFG
Sbjct: 35  KKIIIKNADMKDDMQKEAVDIAIAAFERNNVEKDVAEHIKKEFDKKHGPTWHCIVGRNFG 94

Query: 345 SYVTHETNHFVYFYLDQKAILLFKSG 422
           SYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 95  SYVTHETNHFVYFYLDQKAVLLFKSG 120


>ref|XP_004150499.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449528079|ref|XP_004171034.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 117

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/90 (83%), Positives = 82/90 (91%)
 Frame = +3

Query: 153 TGAKKKVIIKSADMKDDVQKEAIDCALSAVEKHSVEKDIAEFIKKEFDKKHGPTWHCIVG 332
           T   KK++IKSADM  DVQK+AID A++A EKHSVEKDIAE IKKEFDK+HGPTWHCIVG
Sbjct: 28  TTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVG 87

Query: 333 RNFGSYVTHETNHFVYFYLDQKAILLFKSG 422
           RNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 88  RNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117


>ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449515341|ref|XP_004164708.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 120

 Score =  160 bits (404), Expect = 2e-37
 Identities = 78/94 (82%), Positives = 84/94 (89%), Gaps = 2/94 (2%)
 Frame = +3

Query: 147 PSTGA--KKKVIIKSADMKDDVQKEAIDCALSAVEKHSVEKDIAEFIKKEFDKKHGPTWH 320
           PS+ A   KK++IKSADM  D+QKEAID A++A EKHSVEKDIAE IKKEFDK HGPTWH
Sbjct: 27  PSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWH 86

Query: 321 CIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 422
           CIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
Sbjct: 87  CIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120


Top