BLASTX nr result

ID: Cimicifuga21_contig00019367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019367
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis ...    72   6e-11
ref|XP_002511359.1| UBX domain-containing protein 8-B, putative ...    60   2e-07
ref|XP_004157781.1| PREDICTED: LOW QUALITY PROTEIN: FAS-associat...    55   8e-06
ref|XP_004152486.1| PREDICTED: FAS-associated factor 2-B-like [C...    55   8e-06

>ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis vinifera]
          Length = 382

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/84 (51%), Positives = 53/84 (63%)
 Frame = -1

Query: 255 MSFGSRDSTRASNIQAYCNGMVRRMVSLPRSIIGGVSRATTERMHPMTLGTIGGRDHRHN 76
           MS   R+S RA   +A C+G+VRRMVSLPRSIIGGVSR      H + L  IGGR ++H 
Sbjct: 1   MSSAIRESGRAL-AEATCHGIVRRMVSLPRSIIGGVSRVMG---HGIDLMGIGGRRNQHL 56

Query: 75  SSTSYQTQHFTQDPHSIPEEWVFL 4
              ++Q  H  Q P  +PEEW FL
Sbjct: 57  LQPNFQLPH-PQQPEMVPEEWAFL 79


>ref|XP_002511359.1| UBX domain-containing protein 8-B, putative [Ricinus communis]
           gi|223550474|gb|EEF51961.1| UBX domain-containing
           protein 8-B, putative [Ricinus communis]
          Length = 392

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = -1

Query: 255 MSFGSRDSTRASNIQAYCNGMVRRMVSLPRSIIGGVSRATTERMHPMTLGTIGGRDHRHN 76
           MS   RDS RA   +A CNG+VRRMVSLPRSI+GG SR     +  + +G IG      N
Sbjct: 1   MSSTVRDSARAMR-EASCNGIVRRMVSLPRSIVGGFSRVMGHGIGRIGIG-IGSGRRDQN 58

Query: 75  SSTSYQTQHFTQDPHSI--PEEWVFL 4
              ++  Q   QD H +  PEEW FL
Sbjct: 59  LPLNFTVQP-PQDHHPLIAPEEWTFL 83


>ref|XP_004157781.1| PREDICTED: LOW QUALITY PROTEIN: FAS-associated factor 2-B-like
           [Cucumis sativus]
          Length = 370

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = -1

Query: 255 MSFGSRDSTRASNIQAYCNGMVRRMVSLPRSIIGGVSRATTERMHPMTLGTIGGRDHRHN 76
           MS   R+++R +  +A  NG++RRMV+LPRSI+GG SR              GGR+    
Sbjct: 1   MSSTMRETSRLA--EASINGIIRRMVNLPRSILGGFSRVMN-----------GGRN--QT 45

Query: 75  SSTSYQTQHFTQDPHSIPEEWVFL 4
             +SYQ Q   QD   +PEEW FL
Sbjct: 46  LPSSYQYQILQQDTPYVPEEWSFL 69


>ref|XP_004152486.1| PREDICTED: FAS-associated factor 2-B-like [Cucumis sativus]
          Length = 370

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = -1

Query: 255 MSFGSRDSTRASNIQAYCNGMVRRMVSLPRSIIGGVSRATTERMHPMTLGTIGGRDHRHN 76
           MS   R+++R +  +A  NG++RRMV+LPRSI+GG SR              GGR+    
Sbjct: 1   MSSTMRETSRLA--EASINGIIRRMVNLPRSILGGFSRVMN-----------GGRN--QT 45

Query: 75  SSTSYQTQHFTQDPHSIPEEWVFL 4
             +SYQ Q   QD   +PEEW FL
Sbjct: 46  LPSSYQYQILQQDTPYVPEEWSFL 69


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