BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018588
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   597   e-168
gb|ABK95931.1| unknown [Populus trichocarpa]                          582   e-164
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...   565   e-159
gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu...   554   e-155
gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tubero...   554   e-155

>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
            [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
            protein product [Vitis vinifera]
          Length = 449

 Score =  597 bits (1538), Expect = e-168
 Identities = 298/311 (95%), Positives = 302/311 (97%)
 Frame = +3

Query: 114  STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 293
            STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF
Sbjct: 2    STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 61

Query: 294  VDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVAGNVLLVTIEGVEA 473
            +D NQAISMVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEA
Sbjct: 62   LDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVEA 121

Query: 474  GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 653
            GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP
Sbjct: 122  GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 181

Query: 654  EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTMQATLGPDGKKKEPE 833
            EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+AIEG  Q  LGPDGKKKEPE
Sbjct: 182  EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPE 241

Query: 834  SNVLLASIENLQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALVQYPDVTTAAVAKEA 1013
            SNVLLASIEN+QYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQAL+QYPDVTTAAVAKEA
Sbjct: 242  SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEA 301

Query: 1014 LEGHNIYDGGY 1046
            LEGH IYDGGY
Sbjct: 302  LEGHCIYDGGY 312



 Score =  102 bits (253), Expect = 2e-19
 Identities = 57/105 (54%), Positives = 69/105 (65%)
 Frame = +3

Query: 438 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 617
           NVLL +IE ++   V++DV+H VFSAFG V KIA FEK  G QALIQ+ D  TA+ A+ A
Sbjct: 243 NVLLASIENMQYA-VTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEA 301

Query: 618 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 752
           L+G  I         G C L +SYS HTDLN+K  S RSRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIP 340


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  582 bits (1501), Expect = e-164
 Identities = 287/311 (92%), Positives = 299/311 (96%)
 Frame = +3

Query: 114  STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 293
            STSGQPQFRYTQTPSKVLHLRNLPWECTEEEL+ELCKPFG+IVNTKCNVGANRNQAFVEF
Sbjct: 2    STSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGRIVNTKCNVGANRNQAFVEF 61

Query: 294  VDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVAGNVLLVTIEGVEA 473
            VDQNQAI MVSYYASSS+PAQVRGKTVYIQYSNR EIVNNKS GD  GNVLLVTIEGVEA
Sbjct: 62   VDQNQAIQMVSYYASSSDPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVEA 121

Query: 474  GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 653
            GDVSIDVIHLVFSAFG++HKIATFEKAAGFQALIQFTD+ETASSARNALDGRSIPRYLLP
Sbjct: 122  GDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNALDGRSIPRYLLP 181

Query: 654  EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTMQATLGPDGKKKEPE 833
            EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+AIEG +Q T+G DGKKKEPE
Sbjct: 182  EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTVGADGKKKEPE 241

Query: 834  SNVLLASIENLQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALVQYPDVTTAAVAKEA 1013
            SNVLLASIEN+QYAVT+DVLHTVFSAFGTVQKIAIFEKNGG QAL+QYPDV TAAVAKE 
Sbjct: 242  SNVLLASIENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKET 301

Query: 1014 LEGHNIYDGGY 1046
            LEGH IYDGGY
Sbjct: 302  LEGHCIYDGGY 312



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 56/105 (53%), Positives = 68/105 (64%)
 Frame = +3

Query: 438 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 617
           NVLL +IE ++   V+IDV+H VFSAFG V KIA FEK  G QALIQ+ D  TA+ A+  
Sbjct: 243 NVLLASIENMQYA-VTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKET 301

Query: 618 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 752
           L+G  I         G C L +SYS HTDLN+K  S +SRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIP 340


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  565 bits (1457), Expect = e-159
 Identities = 283/315 (89%), Positives = 296/315 (93%), Gaps = 4/315 (1%)
 Frame = +3

Query: 114  STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 293
            STSGQPQFRYTQTPSKVLHLRNLPWECTEEEL+ELC+PFGKIVNTKCNVG NRNQAFVEF
Sbjct: 2    STSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCEPFGKIVNTKCNVGNNRNQAFVEF 61

Query: 294  VDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVAGNVLLVTIEGVEA 473
             +QNQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GD  GNVLLVTIEGVEA
Sbjct: 62   AEQNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVEA 121

Query: 474  GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIP----R 641
            GDVSIDVIHLVFSAFG+VHKIATFEKAAGFQALIQFTDAETASSARNALDGR+I     R
Sbjct: 122  GDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNALDGRNIMFKKFR 181

Query: 642  YLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTMQATLGPDGKK 821
            YLLPEHVGSC+LRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+AI+G +Q+T+G DGKK
Sbjct: 182  YLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGPVQSTVGADGKK 241

Query: 822  KEPESNVLLASIENLQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALVQYPDVTTAAV 1001
            KEPESNVLLASIEN+QYAVTVDVLHTVFS FGTVQKIAIFEKNGG QAL+QYPDV TAAV
Sbjct: 242  KEPESNVLLASIENMQYAVTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAAV 301

Query: 1002 AKEALEGHNIYDGGY 1046
            AKE LEGH IYDGGY
Sbjct: 302  AKETLEGHCIYDGGY 316



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 54/105 (51%), Positives = 67/105 (63%)
 Frame = +3

Query: 438 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 617
           NVLL +IE ++   V++DV+H VFS FG V KIA FEK  G QALIQ+ D  TA+ A+  
Sbjct: 247 NVLLASIENMQYA-VTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKET 305

Query: 618 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 752
           L+G  I         G C L +SYS HTDLN+K  S +SRDYT P
Sbjct: 306 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIP 344


>gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
          Length = 442

 Score =  554 bits (1428), Expect = e-155
 Identities = 274/311 (88%), Positives = 290/311 (93%)
 Frame = +3

Query: 114  STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 293
            STSGQ QFRYTQTPSKVLHLRNLPW+C++EELVELCKPFGKIVNTKCNVGANRNQAFVEF
Sbjct: 2    STSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEF 61

Query: 294  VDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVAGNVLLVTIEGVEA 473
             D NQAI+MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEA
Sbjct: 62   ADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEA 121

Query: 474  GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 653
            GDVSIDVIHLVFSAFGFV KIATFEKAAGFQALIQF+D  TAS+AR ALDGRSIP+YLLP
Sbjct: 122  GDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLP 181

Query: 654  EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTMQATLGPDGKKKEPE 833
            EHV  CHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+A+EG +Q  +GPDGKKKEPE
Sbjct: 182  EHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPE 241

Query: 834  SNVLLASIENLQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALVQYPDVTTAAVAKEA 1013
            SNVL AS+EN+QYAVTVDVL+TVFSAFGTVQKIAIFEKNG  QAL+QYPDVT AA AK+A
Sbjct: 242  SNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 1014 LEGHNIYDGGY 1046
            LEGH IYDGGY
Sbjct: 302  LEGHCIYDGGY 312



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 50/105 (47%), Positives = 68/105 (64%)
 Frame = +3

Query: 438 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 617
           NVL  ++E ++   V++DV++ VFSAFG V KIA FEK    QALIQ+ D   A++A++A
Sbjct: 243 NVLFASLENMQYA-VTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 618 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 752
           L+G  I         G C L +SYS HTDLN++  S +SRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVP 340


>gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
          Length = 437

 Score =  554 bits (1428), Expect = e-155
 Identities = 274/311 (88%), Positives = 290/311 (93%)
 Frame = +3

Query: 114  STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 293
            STSGQ QFRYTQTPSKVLHLRNLPW+C++EELVELCKPFGKIVNTKCNVGANRNQAFVEF
Sbjct: 2    STSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEF 61

Query: 294  VDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVAGNVLLVTIEGVEA 473
             D NQAI+MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEA
Sbjct: 62   ADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEA 121

Query: 474  GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 653
            GDVSIDVIHLVFSAFGFV KIATFEKAAGFQALIQF+D  TAS+AR ALDGRSIP+YLLP
Sbjct: 122  GDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLP 181

Query: 654  EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTMQATLGPDGKKKEPE 833
            EHV  CHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+A+EG +Q  +GPDGKKKEPE
Sbjct: 182  EHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPE 241

Query: 834  SNVLLASIENLQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALVQYPDVTTAAVAKEA 1013
            SNVL AS+EN+QYAVTVDVL+TVFSAFGTVQKIAIFEKNG  QAL+QYPDVT AA AK+A
Sbjct: 242  SNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 1014 LEGHNIYDGGY 1046
            LEGH IYDGGY
Sbjct: 302  LEGHCIYDGGY 312



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 50/105 (47%), Positives = 68/105 (64%)
 Frame = +3

Query: 438 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 617
           NVL  ++E ++   V++DV++ VFSAFG V KIA FEK    QALIQ+ D   A++A++A
Sbjct: 243 NVLFASLENMQYA-VTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 618 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 752
           L+G  I         G C L +SYS HTDLN++  S +SRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVP 340