BLASTX nr result

ID: Cimicifuga21_contig00018389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018389
         (1513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15032.3| unnamed protein product [Vitis vinifera]              311   2e-82
emb|CAN67883.1| hypothetical protein VITISV_022357 [Vitis vinifera]   311   3e-82
ref|XP_002318648.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
ref|XP_002282800.1| PREDICTED: probable inactive poly [ADP-ribos...   300   9e-79
ref|XP_002511397.1| conserved hypothetical protein [Ricinus comm...   298   2e-78

>emb|CBI15032.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  311 bits (798), Expect = 2e-82
 Identities = 162/327 (49%), Positives = 222/327 (67%), Gaps = 6/327 (1%)
 Frame = -3

Query: 1160 HDPEMEISDTESSCSNGSPKRIGLFGDAGLVKLDQEENVYELVKGAFLSGLGLLGKHTNV 981
            H  E  +SD ES  ++            GLV+LD++E ++ +++ A +SGLG L +HT+V
Sbjct: 18   HGDEASVSDCESGTTHNEHIH-------GLVRLDEDEKLHRIIEKALVSGLGPLRQHTSV 70

Query: 980  VALHKNSFSGLSEQARLQSFRVFSEAM-KKCRSNGGNLKYAWYGTSKDGVNRIINHGFTY 804
            V +H+N ++ +  QARLQSFR+F  A+ KKC  N  N+K+ WY  SKD + RII+HGF++
Sbjct: 71   VDIHRNGYASVISQARLQSFRIFGRAVEKKCEGNA-NVKFGWYSASKDEIGRIISHGFSH 129

Query: 803  CGRTENSGLFGFGIYLSPHSSTIDRYGLLAIFSSCFSSVVLCRVILGNMEEVHPGSDQSH 624
                 ++GL+G G+YL PH S+I+      +       ++LCRVILG ME VHPGS Q H
Sbjct: 130  -----SNGLYGCGVYLYPHHSSIESMKSCVVDEDGLRHLLLCRVILGKMEVVHPGSQQYH 184

Query: 623  PSSKVFDSGVDNLLSPKKYIVWSTNMNTHILPEYVISFKAPPSLSGIQEPRVS---PKSP 453
            PSS+ FDSGVDNL +PKKYIVWST+MNTHILPEYV++F+APP L G    + S   P SP
Sbjct: 185  PSSEDFDSGVDNLPAPKKYIVWSTHMNTHILPEYVVTFRAPPCLKGFLNTQGSLKKPTSP 244

Query: 452  WVAFPTLISILSRFLPPNTVNLVQKYHHEFQQKKLSRNQLIQHTRQIVGDKLLSSVIKSI 273
            W+ F TLIS+LS+FLPP +VNL+ K+H + ++ K+ R++LI+  RQI GDKLL+ VIKS 
Sbjct: 245  WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 304

Query: 272  KAKQLNATTDS--LPTSNGVLQRTNSI 198
            +AKQLN+T  S      NG   R +SI
Sbjct: 305  RAKQLNSTNGSHQRKAQNGARNRMDSI 331


>emb|CAN67883.1| hypothetical protein VITISV_022357 [Vitis vinifera]
          Length = 341

 Score =  311 bits (797), Expect = 3e-82
 Identities = 162/327 (49%), Positives = 222/327 (67%), Gaps = 6/327 (1%)
 Frame = -3

Query: 1160 HDPEMEISDTESSCSNGSPKRIGLFGDAGLVKLDQEENVYELVKGAFLSGLGLLGKHTNV 981
            H  E  +SD ES  ++            GLV+LD++E ++ +++ A +SGLG L +HT+V
Sbjct: 15   HGDEASVSDCESGTTHNEHIH-------GLVRLDEDEKLHRIIEKAXVSGLGPLRQHTSV 67

Query: 980  VALHKNSFSGLSEQARLQSFRVFSEAM-KKCRSNGGNLKYAWYGTSKDGVNRIINHGFTY 804
            V +H+N ++ +  QARLQSFR+F  A+ KKC  N  N+K+ WY  SKD + RII+HGF++
Sbjct: 68   VDIHRNGYASVISQARLQSFRIFGRAVEKKCEGNA-NVKFGWYSASKDEIGRIISHGFSH 126

Query: 803  CGRTENSGLFGFGIYLSPHSSTIDRYGLLAIFSSCFSSVVLCRVILGNMEEVHPGSDQSH 624
                 ++GL+G G+YL PH S+I+      +       ++LCRVILG ME VHPGS Q H
Sbjct: 127  -----SNGLYGCGVYLYPHHSSIESMKSCVVDEDGLRHLLLCRVILGKMEVVHPGSQQYH 181

Query: 623  PSSKVFDSGVDNLLSPKKYIVWSTNMNTHILPEYVISFKAPPSLSGIQEPRVS---PKSP 453
            PSS+ FDSGVDNL +PKKYIVWST+MNTHILPEYV++F+APP L G    + S   P SP
Sbjct: 182  PSSEDFDSGVDNLPAPKKYIVWSTHMNTHILPEYVVTFRAPPCLKGFLNTQGSLKKPTSP 241

Query: 452  WVAFPTLISILSRFLPPNTVNLVQKYHHEFQQKKLSRNQLIQHTRQIVGDKLLSSVIKSI 273
            W+ F TLIS+LS+FLPP +VNL+ K+H + ++ K+ R++LI+  RQI GDKLL+ VIKS 
Sbjct: 242  WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 301

Query: 272  KAKQLNATTDS--LPTSNGVLQRTNSI 198
            +AKQLN+T  S      NG   R +SI
Sbjct: 302  RAKQLNSTNGSHQRKAQNGARNRMDSI 328


>ref|XP_002318648.1| predicted protein [Populus trichocarpa] gi|222859321|gb|EEE96868.1|
            predicted protein [Populus trichocarpa]
          Length = 282

 Score =  301 bits (772), Expect = 2e-79
 Identities = 152/286 (53%), Positives = 205/286 (71%)
 Frame = -3

Query: 1133 TESSCSNGSPKRIGLFGDAGLVKLDQEENVYELVKGAFLSGLGLLGKHTNVVALHKNSFS 954
            +ESS S  S  ++  F D GLV+L + + V++L+K  F+SGLGLLGK   VVA+H+NS+S
Sbjct: 1    SESSSSGASSGQLPSFND-GLVRLFEGDRVHDLIKRRFVSGLGLLGKQATVVAIHRNSYS 59

Query: 953  GLSEQARLQSFRVFSEAMKKCRSNGGNLKYAWYGTSKDGVNRIINHGFTYCGRTENSGLF 774
            G+ EQAR+QSF++F++AM+K      N+K+ WYG ++D +  I+ HGF+      ++GL+
Sbjct: 60   GVLEQARMQSFQIFAKAMEKKCGGDANVKFGWYGGTRDEICEIVKHGFSARMIDNSNGLY 119

Query: 773  GFGIYLSPHSSTIDRYGLLAIFSSCFSSVVLCRVILGNMEEVHPGSDQSHPSSKVFDSGV 594
            G GIYLSP  S ++    L++       ++LCR+ILG  E VHPGSDQ  PSS+ FDSG+
Sbjct: 120  GCGIYLSPDDSPVECVKKLSVDKDGLRHLLLCRLILGKSEVVHPGSDQCRPSSEEFDSGM 179

Query: 593  DNLLSPKKYIVWSTNMNTHILPEYVISFKAPPSLSGIQEPRVSPKSPWVAFPTLISILSR 414
            DNL SPKKYI+WST+MNTHILPE+VISF+AP   S ++E    P SPW+ FP LIS LS+
Sbjct: 180  DNLTSPKKYILWSTHMNTHILPEFVISFRAP---SRLKESLRRPNSPWMPFPALISALSK 236

Query: 413  FLPPNTVNLVQKYHHEFQQKKLSRNQLIQHTRQIVGDKLLSSVIKS 276
            FLPP T  L+ KYH + ++KK+SR QLIQ  R+ VGDKLL SVIKS
Sbjct: 237  FLPPTTTKLIIKYHRDHREKKISRQQLIQQVRKTVGDKLLISVIKS 282


>ref|XP_002282800.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 [Vitis
            vinifera]
          Length = 310

 Score =  300 bits (767), Expect = 9e-79
 Identities = 152/303 (50%), Positives = 210/303 (69%), Gaps = 4/303 (1%)
 Frame = -3

Query: 1160 HDPEMEISDTESSCSNGSPKRIGLFGDAGLVKLDQEENVYELVKGAFLSGLGLLGKHTNV 981
            H  E  +SD ES  ++            GLV+LD++E ++ +++ A +SGLG L +HT+V
Sbjct: 18   HGDEASVSDCESGTTHNEHIH-------GLVRLDEDEKLHRIIEKALVSGLGPLRQHTSV 70

Query: 980  VALHKNSFSGLSEQARLQSFRVFSEAM-KKCRSNGGNLKYAWYGTSKDGVNRIINHGFTY 804
            V +H+N ++ +  QARLQSFR+F  A+ KKC  N  N+K+ WY  SKD + RII+HGF++
Sbjct: 71   VDIHRNGYASVISQARLQSFRIFGRAVEKKCEGNA-NVKFGWYSASKDEIGRIISHGFSH 129

Query: 803  CGRTENSGLFGFGIYLSPHSSTIDRYGLLAIFSSCFSSVVLCRVILGNMEEVHPGSDQSH 624
                 ++GL+G G+YL PH S+I+      +       ++LCRVILG ME VHPGS Q H
Sbjct: 130  -----SNGLYGCGVYLYPHHSSIESMKSCVVDEDGLRHLLLCRVILGKMEVVHPGSQQYH 184

Query: 623  PSSKVFDSGVDNLLSPKKYIVWSTNMNTHILPEYVISFKAPPSLSGIQEPRVS---PKSP 453
            PSS+ FDSGVDNL +PKKYIVWST+MNTHILPEYV++F+APP L G    + S   P SP
Sbjct: 185  PSSEDFDSGVDNLPAPKKYIVWSTHMNTHILPEYVVTFRAPPCLKGFLNTQGSLKKPTSP 244

Query: 452  WVAFPTLISILSRFLPPNTVNLVQKYHHEFQQKKLSRNQLIQHTRQIVGDKLLSSVIKSI 273
            W+ F TLIS+LS+FLPP +VNL+ K+H + ++ K+ R++LI+  RQI GDKLL+ VIKS 
Sbjct: 245  WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 304

Query: 272  KAK 264
            +AK
Sbjct: 305  RAK 307


>ref|XP_002511397.1| conserved hypothetical protein [Ricinus communis]
            gi|223550512|gb|EEF51999.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 374

 Score =  298 bits (764), Expect = 2e-78
 Identities = 162/307 (52%), Positives = 213/307 (69%), Gaps = 4/307 (1%)
 Frame = -3

Query: 1172 LGNTHDPEMEISDTESSCSNGSPKRIGLFGDAGLVKLDQEENVYELVKGAFLSGLGLLGK 993
            L   +D E  ISD+ES  S+  P+      D GLV+L + + V +L+K  F+SGLGLLGK
Sbjct: 43   LETVNDQESVISDSESVNSSQFPEF-----DDGLVRLSEGDRVNDLIKRRFISGLGLLGK 97

Query: 992  HTNVVALHKNSFSGLSEQARLQSFRVFSEAMK-KCRSNGGNLKYAWYG-TSKDGVNRIIN 819
               VVA+H+N +SG+  QAR+QSF++F++AM+ KC  N  N+KYAW+G +S+D +  I+ 
Sbjct: 98   QATVVAIHRNKYSGIVGQARMQSFQIFTKAMEDKCGGNA-NVKYAWFGASSRDDICNIMT 156

Query: 818  HGFTYCGR--TENSGLFGFGIYLSPHSSTIDRYGLLAIFSSCFSSVVLCRVILGNMEEVH 645
            HGF   GR   +N+GL+G GIYLSP  S ++    L +       ++LCRVILG  EEVH
Sbjct: 157  HGF---GRQINDNNGLYGCGIYLSPDDSPLESVKNLRVDKDGLRHLLLCRVILGRSEEVH 213

Query: 644  PGSDQSHPSSKVFDSGVDNLLSPKKYIVWSTNMNTHILPEYVISFKAPPSLSGIQEPRVS 465
            PGS+Q HPSS+ FDSG+D  LSPKKYIVWST MNTHI PE+VISFKAP  L   + P V 
Sbjct: 214  PGSEQCHPSSEKFDSGIDTFLSPKKYIVWSTYMNTHIFPEFVISFKAPCCLK--ESPGV- 270

Query: 464  PKSPWVAFPTLISILSRFLPPNTVNLVQKYHHEFQQKKLSRNQLIQHTRQIVGDKLLSSV 285
            P SPW+ FP LIS LS FLPP T+ L+ K+H + ++KK+SR +LIQ  RQI GD+LL +V
Sbjct: 271  PTSPWMPFPALISALSEFLPPATIGLLDKHHKDHREKKISRQELIQRVRQIAGDRLLIAV 330

Query: 284  IKSIKAK 264
            IKS + K
Sbjct: 331  IKSFRTK 337


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