BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017945
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   710   0.0  
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   709   0.0  
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   701   0.0  
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   699   0.0  
emb|CBH32591.1| unnamed protein product [Triticum aestivum]           657   0.0  

>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  710 bits (1833), Expect = 0.0
 Identities = 346/435 (79%), Positives = 395/435 (90%), Gaps = 1/435 (0%)
 Frame = +1

Query: 1    LKVSYPFKDPPLPSDLKGENFSALLGTHCSALEHFLIKRKIKGPLWLSVSKFSSCPVSQR 180
            LK++Y FK+PPLP+DLKGE FSALLGTHCSALE FL+KRK+KGP WLSVSKFS+CP SQR
Sbjct: 466  LKINYSFKEPPLPADLKGETFSALLGTHCSALELFLVKRKVKGPSWLSVSKFSTCPASQR 525

Query: 181  VSWCKFEVTVDCPKDIRIPSSSKVTLEIPPVIVSAINLKTIINEKQNLNEIVSASIISCQ 360
            VSWCKFE+T D PKDIR+ SSSK T+EIPPV+V+AINLKTIINEKQN+NEIVSAS+I C 
Sbjct: 526  VSWCKFEITADSPKDIRVSSSSKNTIEIPPVVVTAINLKTIINEKQNVNEIVSASLICCH 585

Query: 361  KAKIDTPMLASEWKRPGVLSHFTVVRKLEGGIFPMGFTKEVTDRNSKAGFNVLGVESSER 540
            KAKIDTPMLASEWK+PG+LSHFTVVRKL+GGIFPMGF+KEVT+RN++AG NVLG+ESSER
Sbjct: 586  KAKIDTPMLASEWKKPGMLSHFTVVRKLDGGIFPMGFSKEVTERNTQAGSNVLGIESSER 645

Query: 541  ALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRAQACKVPSSMWSKVGRLKRAVMPKLT 720
            ALLNRLM+ L+KLDSDVLVGHNISGFDLDVLLHR+QAC+VPSSMWSK+GRLKR++MPKLT
Sbjct: 646  ALLNRLMIALNKLDSDVLVGHNISGFDLDVLLHRSQACRVPSSMWSKIGRLKRSIMPKLT 705

Query: 721  KGSTVFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLTKTQLNKDRKEIPPHD 900
            KG+T+FGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLT+L +T+LNKDRKE+ PHD
Sbjct: 706  KGNTMFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTELARTRLNKDRKEVTPHD 765

Query: 901  IPSMFQSSGLLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR 1080
            IP MFQSS  L+ELIE+GETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR
Sbjct: 766  IPRMFQSSKSLIELIEFGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR 825

Query: 1081 VEYLLLHAFHAKKYIVPDKISAR-EKETNSTKRRIAHGAEGGDVDDLNINGTHTEDGLQQ 1257
            VEYLLLHAFHAKKYIVPDK S   +KET  TKRRI +G E  + ++L+ +  + ++   +
Sbjct: 826  VEYLLLHAFHAKKYIVPDKNSFHLKKETKMTKRRIHNGVEEKNAEELDTDHANFDNDSPE 885

Query: 1258 LHQGKSKKGPAYAGG 1302
              +GK KKGPAY GG
Sbjct: 886  NDRGKGKKGPAYVGG 900


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  709 bits (1831), Expect = 0.0
 Identities = 343/434 (79%), Positives = 389/434 (89%)
 Frame = +1

Query: 1    LKVSYPFKDPPLPSDLKGENFSALLGTHCSALEHFLIKRKIKGPLWLSVSKFSSCPVSQR 180
            LK++YPFK+PPLP+DLKGE F ALLGTHCSALE FL+KRK+KGP WLSVSKF++CP SQ+
Sbjct: 252  LKINYPFKEPPLPADLKGETFCALLGTHCSALELFLVKRKVKGPSWLSVSKFATCPASQK 311

Query: 181  VSWCKFEVTVDCPKDIRIPSSSKVTLEIPPVIVSAINLKTIINEKQNLNEIVSASIISCQ 360
            VSWCKFE+ V+ PK+I++ SSS   LEIPPV+V+AINLKT+INEKQN+NEIVSAS+I C 
Sbjct: 312  VSWCKFEIIVESPKEIQVSSSSNSKLEIPPVVVAAINLKTVINEKQNVNEIVSASVICCH 371

Query: 361  KAKIDTPMLASEWKRPGVLSHFTVVRKLEGGIFPMGFTKEVTDRNSKAGFNVLGVESSER 540
            KAKIDTPMLASEWK+PG+LSHFTVVRKL+GGIFPMGF+KEVTDRN+ AG NVL +ESSER
Sbjct: 372  KAKIDTPMLASEWKKPGMLSHFTVVRKLDGGIFPMGFSKEVTDRNTMAGSNVLAIESSER 431

Query: 541  ALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRAQACKVPSSMWSKVGRLKRAVMPKLT 720
            ALLNRLM+ LHKLDSD LVGHNISGFDLDVLLHR QAC+VPSS WSK+GRLKR+VMPKLT
Sbjct: 432  ALLNRLMIALHKLDSDFLVGHNISGFDLDVLLHRTQACRVPSSTWSKIGRLKRSVMPKLT 491

Query: 721  KGSTVFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLTKTQLNKDRKEIPPHD 900
            KG+ +FGSGASPGIMSCIAGRLLCDTYL SRDLLKEVSYSLTQL KT+LNKDRKEI PHD
Sbjct: 492  KGNAIFGSGASPGIMSCIAGRLLCDTYLASRDLLKEVSYSLTQLAKTRLNKDRKEIAPHD 551

Query: 901  IPSMFQSSGLLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR 1080
            IP+MFQ+S  L+EL+EYGETDAWLSMELMFHLS+LPLTRQLTNISGNLWGKTLQGARAQR
Sbjct: 552  IPTMFQTSKSLIELVEYGETDAWLSMELMFHLSILPLTRQLTNISGNLWGKTLQGARAQR 611

Query: 1081 VEYLLLHAFHAKKYIVPDKISAREKETNSTKRRIAHGAEGGDVDDLNINGTHTEDGLQQL 1260
            VEYLLLHAFHAKKYIVPDK+S+R KE   TKRRI +G E  + D+L+ +  + E+  QQ 
Sbjct: 612  VEYLLLHAFHAKKYIVPDKMSSRVKEAKITKRRINNGIEDRNADELDTDAANFENDNQQS 671

Query: 1261 HQGKSKKGPAYAGG 1302
              GK KKGPAYAGG
Sbjct: 672  DHGKRKKGPAYAGG 685


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  701 bits (1808), Expect = 0.0
 Identities = 351/436 (80%), Positives = 385/436 (88%), Gaps = 2/436 (0%)
 Frame = +1

Query: 1    LKVSYPFKDPPLPSDLKGENFSALLGTHCSALEHFLIKRKIKGPLWLSVSKFSSCPVSQR 180
            LK++YPFKDPPLP+DLKGE F ALLGTHCSALE FLIKRKI GP WLS+SKFSSCP  +R
Sbjct: 467  LKINYPFKDPPLPADLKGEAFCALLGTHCSALELFLIKRKIMGPYWLSISKFSSCPAPER 526

Query: 181  VSWCKFEVTVDCPKDIRI-PSSSKVTLEIPPVIVSAINLKTIINEKQNLNEIVSASIISC 357
            VSWCKFEVTVDCPKDIRI  SSSK   EIPPV+V+AINLKTIINEKQN+NEIVSAS+I C
Sbjct: 527  VSWCKFEVTVDCPKDIRILASSSKNIAEIPPVVVTAINLKTIINEKQNVNEIVSASVICC 586

Query: 358  QKAKIDTPMLASEWKRPGVLSHFTVVRKLEGGIFPMGFTKEVTDRNSKAGFNVLGVESSE 537
             K KID+PML SEWKRPGVLSHFTVVRKL+GGIFPMGFTKE +DRNSKAG NVL  E SE
Sbjct: 587  HKVKIDSPMLPSEWKRPGVLSHFTVVRKLDGGIFPMGFTKEASDRNSKAGANVLCSEISE 646

Query: 538  RALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRAQACKVPSSMWSKVGRLKRAVMPKL 717
            RALLNRLM+EL+KLDSDVLVGHNISGFDLDVLLHRA+ACKVP  MWSK+GRLKR VMPKL
Sbjct: 647  RALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAEACKVP--MWSKIGRLKRRVMPKL 704

Query: 718  TKGSTVFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLTKTQLNKDRKEIPPH 897
            T+GST+FGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQL KTQLNKDRKEI P 
Sbjct: 705  TRGSTIFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAKTQLNKDRKEIAPQ 764

Query: 898  DIPSMFQSSGLLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQ 1077
            D+  MFQ+S  L++LIEYGETDAWLSMELMFHLSVLPLTR LTNISGNLWGKTLQGARAQ
Sbjct: 765  DVSRMFQTSESLVQLIEYGETDAWLSMELMFHLSVLPLTRLLTNISGNLWGKTLQGARAQ 824

Query: 1078 RVEYLLLHAFHAKKYIVPDKISAREKETNSTKRRIAH-GAEGGDVDDLNINGTHTEDGLQ 1254
            RVEYLLLH FHAKKYIVPDKIS+  +ET  TKRR+   GAE  ++D+L+++  H E+   
Sbjct: 825  RVEYLLLHEFHAKKYIVPDKISSHLRETKWTKRRMNQGGAEDRNIDELDVDDAHVENDAH 884

Query: 1255 QLHQGKSKKGPAYAGG 1302
              +QGK KKGPAY+GG
Sbjct: 885  HNNQGKGKKGPAYSGG 900


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  699 bits (1804), Expect = 0.0
 Identities = 337/434 (77%), Positives = 384/434 (88%)
 Frame = +1

Query: 1    LKVSYPFKDPPLPSDLKGENFSALLGTHCSALEHFLIKRKIKGPLWLSVSKFSSCPVSQR 180
            LK++YPFKDPPLPSDL+GENFSALLGTH SA+E FLIKRKIKGP WLS+SKFSSCP+ QR
Sbjct: 503  LKINYPFKDPPLPSDLRGENFSALLGTHSSAMELFLIKRKIKGPSWLSISKFSSCPIPQR 562

Query: 181  VSWCKFEVTVDCPKDIRIPSSSKVTLEIPPVIVSAINLKTIINEKQNLNEIVSASIISCQ 360
            VSWCKFEV VD PKDI+I +SSK   EIPPV+V+AINLKTIIN+KQN+NEIVSAS+I C 
Sbjct: 563  VSWCKFEVIVDSPKDIKISTSSKNVAEIPPVVVTAINLKTIINQKQNINEIVSASVICCH 622

Query: 361  KAKIDTPMLASEWKRPGVLSHFTVVRKLEGGIFPMGFTKEVTDRNSKAGFNVLGVESSER 540
             AKID PML SEW +PG+LSHFTVVRKLEGGIFPMGFTKE  +RN+KAG NV+  ESSER
Sbjct: 623  SAKIDAPMLTSEWTKPGMLSHFTVVRKLEGGIFPMGFTKEAAERNTKAGSNVISFESSER 682

Query: 541  ALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRAQACKVPSSMWSKVGRLKRAVMPKLT 720
            ALLNRLM+ELHKL+SDVL+GHNISGFDLDVLLHR QACKVPSSMWSK+GRLKR+VMPKLT
Sbjct: 683  ALLNRLMIELHKLESDVLIGHNISGFDLDVLLHRVQACKVPSSMWSKIGRLKRSVMPKLT 742

Query: 721  KGSTVFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLTKTQLNKDRKEIPPHD 900
            KGST+FGSGASPGIMSCI+GRLLCDTYL SR+LLKEVSYSLTQL K QLNKDRKEI PHD
Sbjct: 743  KGSTLFGSGASPGIMSCISGRLLCDTYLSSRELLKEVSYSLTQLVKNQLNKDRKEISPHD 802

Query: 901  IPSMFQSSGLLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR 1080
            +P MFQ++  L+ELIE GETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR
Sbjct: 803  VPQMFQAADSLLELIECGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR 862

Query: 1081 VEYLLLHAFHAKKYIVPDKISAREKETNSTKRRIAHGAEGGDVDDLNINGTHTEDGLQQL 1260
            VEYLLLHAFHAKK+IVPDK S+  +E   TKR++  G EG + + ++ +  + E G+  +
Sbjct: 863  VEYLLLHAFHAKKFIVPDKFSSHAREAKITKRKLNQGDEGKETEPIDADDPNIEGGILDI 922

Query: 1261 HQGKSKKGPAYAGG 1302
            + GK+KKGP+Y+GG
Sbjct: 923  NHGKAKKGPSYSGG 936


>emb|CBH32591.1| unnamed protein product [Triticum aestivum]
          Length = 1016

 Score =  657 bits (1695), Expect = 0.0
 Identities = 318/434 (73%), Positives = 376/434 (86%)
 Frame = +1

Query: 1    LKVSYPFKDPPLPSDLKGENFSALLGTHCSALEHFLIKRKIKGPLWLSVSKFSSCPVSQR 180
            LK++YP+KDP +P+DL+GE+F ALLGT+ SALE FLIKRKIKGP WLS+SKF +CP +QR
Sbjct: 510  LKINYPYKDPAVPADLRGEHFHALLGTNNSALELFLIKRKIKGPSWLSISKFVACPSTQR 569

Query: 181  VSWCKFEVTVDCPKDIRIPSSSKVTLEIPPVIVSAINLKTIINEKQNLNEIVSASIISCQ 360
            VSWCKFEVTVD PKDI +  +S  TLE+PPV+V+A+NLKTIINEK N++EIVSAS+I C 
Sbjct: 570  VSWCKFEVTVDSPKDISVLMTS-TTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICCH 628

Query: 361  KAKIDTPMLASEWKRPGVLSHFTVVRKLEGGIFPMGFTKEVTDRNSKAGFNVLGVESSER 540
            + KIDTPM + +W++ G +SHFTV+RKLEG IFP+G TKE +DRN KAG NVL +ESSER
Sbjct: 629  QVKIDTPMRSEDWQKRGTISHFTVMRKLEGSIFPIGLTKEASDRNQKAGSNVLALESSER 688

Query: 541  ALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRAQACKVPSSMWSKVGRLKRAVMPKLT 720
            ALLNRLM+EL KLD DVLVGHNISGFDLDVLLHRAQ CKVPSSMWSK+GRL+R+VMP+LT
Sbjct: 689  ALLNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVPSSMWSKIGRLRRSVMPRLT 748

Query: 721  KGSTVFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLTKTQLNKDRKEIPPHD 900
            KG+T++GSGASPGIMSCIAGRLLCDTYLCSRDLL+EVSYSLTQL +TQL KDR+E+ PHD
Sbjct: 749  KGNTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLREVSYSLTQLAETQLKKDRREVSPHD 808

Query: 901  IPSMFQSSGLLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR 1080
            IP MFQSSG L++L+EYGETDAWLS+ELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR
Sbjct: 809  IPPMFQSSGTLLKLVEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQR 868

Query: 1081 VEYLLLHAFHAKKYIVPDKISAREKETNSTKRRIAHGAEGGDVDDLNINGTHTEDGLQQL 1260
            VEYLLLH+FHAKK+I+PDK +AR KE NS KR++    EGG+  D        +D +   
Sbjct: 869  VEYLLLHSFHAKKFIIPDKFAARNKELNSAKRKLNADTEGGNAAD-GAADPSIDDEVHNG 927

Query: 1261 HQGKSKKGPAYAGG 1302
             QGK++KGP+YAGG
Sbjct: 928  DQGKARKGPSYAGG 941