BLASTX nr result

ID: Cimicifuga21_contig00017926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017926
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...   129   3e-28
ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Popul...   125   5e-27
ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichoca...   125   6e-27
ref|XP_002334714.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Popul...   124   1e-26

>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 958

 Score =  129 bits (325), Expect = 3e-28
 Identities = 83/211 (39%), Positives = 116/211 (54%), Gaps = 2/211 (0%)
 Frame = +2

Query: 2    RDMALQITKEMNLRIMVKAGVPLEDFPNEEAWGEDLERASFIGSDIKEI--LISPDCPEL 175
            RDMALQ  +E N  IMV+    L++ P ++ W EDL R S + + +KEI    SP CP+L
Sbjct: 431  RDMALQKLRE-NSPIMVEVRERLKELPGKDEWKEDLVRVSLMENRLKEIPSSCSPMCPKL 489

Query: 176  TTLLLNITRSLKHIAHGFFVHMPALKVLNLSFSGIGXXXXXXXXXXXXQVLDVTWCGGLK 355
            +TL LN    L+ IA  FF H+  LKVLNLS + I               L +  C  L+
Sbjct: 490  STLFLNSNIELEMIADSFFKHLQGLKVLNLSSTAIPKLPGSFSDLVNLTALYLRRCEKLR 549

Query: 356  EVPSLEKLQSLIVLKLGYTPIEELPHGMEELVNLKCLHLEGTKLREIPALLISKFSLLQE 535
             +PSL KL+ L  L L YT +EELP GME L NL+ L+L G  L+E+PA ++   S L+ 
Sbjct: 550  HIPSLAKLRELRKLDLRYTALEELPQGMEMLSNLRYLNLHGNNLKELPAGILPNLSCLKF 609

Query: 536  LCMDHIPTYASIGLLDEVLSLIRLESFSISF 628
            L ++    +     ++E+  L  LE+    F
Sbjct: 610  LSINREMGFFKTERVEEMACLKSLETLRYQF 640


>ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222836514|gb|EEE74921.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 900

 Score =  125 bits (315), Expect = 5e-27
 Identities = 87/216 (40%), Positives = 119/216 (55%), Gaps = 7/216 (3%)
 Frame = +2

Query: 2    RDMALQITKEMNLRIMVKAGVPLEDFPNEEAWGEDLERASFIGSDIKEI--LISPDCPEL 175
            RDMA+QI  E N + MVKAG  L++ P+ E W E+L R S + ++I+EI    SP CP L
Sbjct: 407  RDMAIQILLE-NSQGMVKAGAQLKELPDAEEWMENLTRVSLMQNEIEEIPSSYSPRCPYL 465

Query: 176  TTLLLNITRSLKHIAHGFFVHMPALKVLNLSFSGIGXXXXXXXXXXXXQVLDVTWCGGLK 355
            +TL L     L+ +A  FF  +  LKVL+LS+ GI               L +  C  L+
Sbjct: 466  STLFLRDNDRLRFVADSFFKQLHGLKVLDLSYKGIENLPDSVSDLVSLTALLLKECENLR 525

Query: 356  EVPSLEKLQSLIVLKLGYTPIEELPHGMEELVNLKCLHLEGTKLREIPALLISKFSLLQ- 532
             VPSLEKL++L  L L +TP++++P GME L NL+ L + G   +E P+ ++ K S LQ 
Sbjct: 526  HVPSLEKLRALKRLDLYWTPLKKMPQGMECLTNLRYLRMNGCGEKEFPSGILPKLSHLQV 585

Query: 533  ---ELCMDHIPTYASIGLL-DEVLSLIRLESFSISF 628
               E  M     YA I +   EV SL  LES    F
Sbjct: 586  FVLEELMGECCAYAPITVKGKEVGSLRNLESLECHF 621


>ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834654|gb|EEE73117.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 674

 Score =  125 bits (314), Expect = 6e-27
 Identities = 90/213 (42%), Positives = 119/213 (55%), Gaps = 4/213 (1%)
 Frame = +2

Query: 2    RDMALQITKEMNLRIMVKAGVPLEDFPNEEAWGEDLERASFIGSDIKEILIS--PDCPEL 175
            RDMA+QI +E N + MVKAG  L + P  E W E+L R S + + IKEI  S  P CP L
Sbjct: 408  RDMAIQILQE-NSQGMVKAGARLREVPGAEEWTENLTRVSLMRNHIKEIPSSHSPRCPSL 466

Query: 176  TTLLLNITRSLKHIAHGFFVHMPALKVLNLSFSGIGXXXXXXXXXXXXQVLDVTWCGGLK 355
            + LLL     L+ IA+ FF  +  LKVL+LS++GI               L +  C  L+
Sbjct: 467  SILLLCRNSELQFIANSFFKQLHGLKVLDLSYTGITKLPDSVSELVSLTTLLLIDCKMLR 526

Query: 356  EVPSLEKLQSLIVLKLGYTPIEELPHGMEELVNLKCLHLEGTKLREIPALLISKFSLLQE 535
             VPSLEKL++L  L L  T +E++P GME L NLK L + G   +E P+ L+ K S LQ 
Sbjct: 527  HVPSLEKLRALKRLDLSGTALEKIPQGMECLYNLKYLRMNGCGEKEFPSGLLPKLSHLQV 586

Query: 536  LCMDHI-PTYASIGLL-DEVLSLIRLESFSISF 628
              +D+    YASI +   EV  L +LES    F
Sbjct: 587  FELDNRGGQYASITVKGKEVACLRKLESLRCQF 619


>ref|XP_002334714.1| predicted protein [Populus trichocarpa] gi|222874252|gb|EEF11383.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  124 bits (312), Expect = 1e-26
 Identities = 89/216 (41%), Positives = 118/216 (54%), Gaps = 7/216 (3%)
 Frame = +2

Query: 2   RDMALQITKEMNLRIMVKAGVPLEDFPNEEAWGEDLERASFIGSDIKEILIS--PDCPEL 175
           RDMA+QI  + N + MVKAG  L++ P+ E W E+L R S I + IKEI  S  P CP L
Sbjct: 98  RDMAIQILLD-NSQGMVKAGAQLKELPDAEEWTENLTRVSLIRNKIKEIPSSHSPMCPYL 156

Query: 176 TTLLLNITRSLKHIAHGFFVHMPALKVLNLSFSGIGXXXXXXXXXXXXQVLDVTWCGGLK 355
           +TLLL     L+ IA  FF  +  LKVL+LS + I               L +  C  L+
Sbjct: 157 STLLLCQNHCLRFIADSFFKQLHGLKVLDLSGTSIENLPDSVSDLVSLTALLLNECENLR 216

Query: 356 EVPSLEKLQSLIVLKLGYTPIEELPHGMEELVNLKCLHLEGTKLREIPALLISKFSLLQ- 532
            VPSLEKL++L  L L +TP++++P GME L NL+ L + G   +E P+ ++ K S LQ 
Sbjct: 217 HVPSLEKLRALKRLDLYWTPLKKMPQGMECLTNLRYLRMNGCGEKEFPSGILPKLSHLQV 276

Query: 533 ---ELCMDHIPTYASIGLL-DEVLSLIRLESFSISF 628
              E  M     YA I +   EV SL  LES    F
Sbjct: 277 FVLEELMGQFSDYAPITVKGKEVRSLRNLESLECHF 312


>ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222833191|gb|EEE71668.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1214

 Score =  124 bits (312), Expect = 1e-26
 Identities = 84/214 (39%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
 Frame = +2

Query: 2    RDMALQITKEMNLRIMVKAGVPLEDFPNEEAWGEDLERASFIGSDIKEI--LISPDCPEL 175
            RDMA+QI ++ + ++MVKAG  L++ P+ E W E+L R S + + IKEI    SP CP L
Sbjct: 636  RDMAIQILQDES-QVMVKAGAQLKELPDAEEWTENLTRVSLMQNQIKEIPSSYSPRCPYL 694

Query: 176  TTLLLNITRSLKHIAHGFFVHMPALKVLNLSFSGIGXXXXXXXXXXXXQVLDVTWCGGLK 355
            +TLLL   R L+ IA  FF  +  LKVLNL+ +GI               L +  C  L+
Sbjct: 695  STLLLCQNRWLRFIADSFFKQLHGLKVLNLAGTGIQNLPDSVSDLVSLTALLLKGCENLR 754

Query: 356  EVPSLEKLQSLIVLKLGYTPIEELPHGMEELVNLKCLHLEGTKLREIPALLISKFSLLQE 535
             VPS EKL  L  L L  T +E++P GME L NL+ L + G   +E P+ ++ K S LQ 
Sbjct: 755  HVPSFEKLGELKRLDLSRTALEKMPQGMECLTNLRYLRMNGCGEKEFPSGILPKLSQLQV 814

Query: 536  LCMDHIP--TYASIGLLDEVL-SLIRLESFSISF 628
              ++ +   +YA I +  + L SL  LE+    F
Sbjct: 815  FVLEELKGISYAPITVKGKELGSLRNLETLECHF 848


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