BLASTX nr result
ID: Cimicifuga21_contig00017862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00017862
(1648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi... 705 0.0
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,... 682 0.0
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1... 674 0.0
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi... 660 0.0
emb|CBI23460.3| unnamed protein product [Vitis vinifera] 636 e-180
>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 705 bits (1820), Expect = 0.0
Identities = 353/480 (73%), Positives = 397/480 (82%)
Frame = +1
Query: 58 MAQLFGRTKNIANRSKKYLDEALHKKLFREGSSDKSVRSELNQFLNSKKRVYKWEVGMSV 237
M QL RTKNIA RSKKYL+EAL+ +LF++GSS+ SVR +LN FL S KRV+KWEVG +V
Sbjct: 3 MPQL-SRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTV 61
Query: 238 KKLRQRKRFAPAMKLAENMAKRGMNMTVSDQAIHLDIIAKARGISAAETYFVDLPEASKN 417
KKLR RKRF PA+KL+E MAKRGMNMT+SDQAI+LD+I K RG++AAE YF+DLPE SKN
Sbjct: 62 KKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKN 121
Query: 418 HLCYGALLNCYCKELMTDKAEALMEKMKELGFASSSMAYNSLMTLYTKIGQPEKVPAIIQ 597
HL YGALLNCYCKEL+T+KAEALME+MKEL SSM YNSLMTLYTKIGQPEK+P IIQ
Sbjct: 122 HLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQ 181
Query: 598 EMKASEITPDSYTYNVWMRALAAVSDISGVERVIEEMTTDGQVAGDWTTYSNLASIYVNA 777
E+K+ +I PDSYTYN+WMRALAAV+DISGVERVIEEM DG+VA DWTTYSNLASIYV+A
Sbjct: 182 ELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDA 241
Query: 778 GMFXXXXXXXXXXXXRNAFRDLSAYQFLITLYGRTGNLLEVYRIWRSLRLAFPKTANISY 957
G+F RNA RDL+A+QFLITLYGR GNLLEVYR+WRSLRLAFPKTAN+SY
Sbjct: 242 GVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSY 301
Query: 958 LNMIQVLVNLKDLPGAEKCFHEWESVRSTYDIRIANALIGAYAKDGSLEKAETLAERARR 1137
LNMIQVLVNLKDLPGAEKCF EWES S YDIR+ANALIGAYAKDG LEKAE L E ARR
Sbjct: 302 LNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARR 361
Query: 1138 SGAKPNVKTWEIFTEYHLNNGNTNLAVDCVASAISTGRGDGRKWIPPKEVVQALMSQFEQ 1317
GAKPN KTWEIF YHL N AVDCVA+AISTGRGDG+KW+P E++ M FEQ
Sbjct: 362 RGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQ 421
Query: 1318 MKDVEGATNFLETLSKVEYVLGADVFESLIRTYAAAGRTSPSLRRRLKMENVEVSEAAKK 1497
KDV+GA FLE L LG +VFESLIR YAAAGRTSP +RRRLKMENVEVS++ KK
Sbjct: 422 EKDVDGAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKK 481
>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 490
Score = 682 bits (1761), Expect = 0.0
Identities = 344/480 (71%), Positives = 392/480 (81%)
Frame = +1
Query: 58 MAQLFGRTKNIANRSKKYLDEALHKKLFREGSSDKSVRSELNQFLNSKKRVYKWEVGMSV 237
M QLFGRTKN+A RSKKYL+EAL+ +LF+EGSS+ VR +LNQFL S KRVYKWEVG ++
Sbjct: 3 MPQLFGRTKNVAKRSKKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTL 62
Query: 238 KKLRQRKRFAPAMKLAENMAKRGMNMTVSDQAIHLDIIAKARGISAAETYFVDLPEASKN 417
KKLR R + PA+KL+E M+KRGMN TVSDQAIHLD++AK RGI AAE +F+DLPE SKN
Sbjct: 63 KKLRSRGLYYPALKLSEAMSKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKN 122
Query: 418 HLCYGALLNCYCKELMTDKAEALMEKMKELGFASSSMAYNSLMTLYTKIGQPEKVPAIIQ 597
HL YGALLNCYC +LMT++AEALMEKMKEL SSM+YNSLMTLYTKIGQPE++P IIQ
Sbjct: 123 HLTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQ 182
Query: 598 EMKASEITPDSYTYNVWMRALAAVSDISGVERVIEEMTTDGQVAGDWTTYSNLASIYVNA 777
EMK+ I PDSYTYNVWMRALAAV+DISG ERVIEEM DG+VA DWTTYSNLASIYV+A
Sbjct: 183 EMKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDA 242
Query: 778 GMFXXXXXXXXXXXXRNAFRDLSAYQFLITLYGRTGNLLEVYRIWRSLRLAFPKTANISY 957
+F RN RD SA+QFLITLYGR GNL E+YRIWRSLRLAFPKT+NISY
Sbjct: 243 QLFEKAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISY 302
Query: 958 LNMIQVLVNLKDLPGAEKCFHEWESVRSTYDIRIANALIGAYAKDGSLEKAETLAERARR 1137
LNMIQVLVNLKDLPGAEKCF EWES S YDIR+AN LI AYAK G LEKAE L ERA
Sbjct: 303 LNMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIG 362
Query: 1138 SGAKPNVKTWEIFTEYHLNNGNTNLAVDCVASAISTGRGDGRKWIPPKEVVQALMSQFEQ 1317
GAKPN KTWEIF++Y+ NG+ L+V+C+A+AIS GRGDG+KWIP EVV + M+ FEQ
Sbjct: 363 RGAKPNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQ 422
Query: 1318 MKDVEGATNFLETLSKVEYVLGADVFESLIRTYAAAGRTSPSLRRRLKMENVEVSEAAKK 1497
KDV+GA F+E L K + A+VFESLIRTYAAAGRTS LRRRLKMENVEVSEA +K
Sbjct: 423 QKDVDGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAGQK 482
>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
unknown [Populus trichocarpa] gi|222873242|gb|EEF10373.1|
predicted protein [Populus trichocarpa]
Length = 490
Score = 674 bits (1740), Expect = 0.0
Identities = 333/480 (69%), Positives = 393/480 (81%)
Frame = +1
Query: 58 MAQLFGRTKNIANRSKKYLDEALHKKLFREGSSDKSVRSELNQFLNSKKRVYKWEVGMSV 237
M QL+GRTK++ RSKKYL+EAL+ +LF+EGSS+ SVR +LNQFL S KRV+KWEVG ++
Sbjct: 3 MPQLYGRTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTI 62
Query: 238 KKLRQRKRFAPAMKLAENMAKRGMNMTVSDQAIHLDIIAKARGISAAETYFVDLPEASKN 417
KKLR R + PA+KL+E M+ RGMN TVSDQAIHLD++AK RGI AAE YF+DLPE SKN
Sbjct: 63 KKLRSRNLYYPAVKLSETMSSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKN 122
Query: 418 HLCYGALLNCYCKELMTDKAEALMEKMKELGFASSSMAYNSLMTLYTKIGQPEKVPAIIQ 597
YGALLNCYCKELMT++AEAL+EKMKEL SSM+YNSLMTLYTK+GQPE++PAIIQ
Sbjct: 123 LRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQ 182
Query: 598 EMKASEITPDSYTYNVWMRALAAVSDISGVERVIEEMTTDGQVAGDWTTYSNLASIYVNA 777
EMKA + PDSYTYNVWMRALAAV+DISGVERVIEEM DG+VA +WTTYSNLASIYV+A
Sbjct: 183 EMKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDA 242
Query: 778 GMFXXXXXXXXXXXXRNAFRDLSAYQFLITLYGRTGNLLEVYRIWRSLRLAFPKTANISY 957
G F NA +DL A+QFLITLYGRTG L+EVYRIWRSLRLAFPKTANISY
Sbjct: 243 GYFDKAEKALKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISY 302
Query: 958 LNMIQVLVNLKDLPGAEKCFHEWESVRSTYDIRIANALIGAYAKDGSLEKAETLAERARR 1137
LNMIQVLVNLKD+PGAEKCF EWES STYDIR+AN +I AYAK+G ++KAE L ERARR
Sbjct: 303 LNMIQVLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARR 362
Query: 1138 SGAKPNVKTWEIFTEYHLNNGNTNLAVDCVASAISTGRGDGRKWIPPKEVVQALMSQFEQ 1317
GAKPN KTWEIF +Y+L NG+ L VDC+A+A+S GRG+G+KW+P +V +LM+ FEQ
Sbjct: 363 RGAKPNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQ 422
Query: 1318 MKDVEGATNFLETLSKVEYVLGADVFESLIRTYAAAGRTSPSLRRRLKMENVEVSEAAKK 1497
KDV+GA + +E L K + +VFESLIRTYAAAGR S +RRRLKMENVEVS+ +K
Sbjct: 423 QKDVDGAEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQK 482
>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
[Glycine max]
Length = 490
Score = 660 bits (1703), Expect = 0.0
Identities = 332/478 (69%), Positives = 381/478 (79%)
Frame = +1
Query: 64 QLFGRTKNIANRSKKYLDEALHKKLFREGSSDKSVRSELNQFLNSKKRVYKWEVGMSVKK 243
QL+GR+K++ RSKKYL+EAL+ KLF++GSS VR LN F+ S+KRVYKWEVG ++KK
Sbjct: 5 QLYGRSKSVVKRSKKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLKK 64
Query: 244 LRQRKRFAPAMKLAENMAKRGMNMTVSDQAIHLDIIAKARGISAAETYFVDLPEASKNHL 423
LR RK + PA+KL+E MAKR M TVSD AIHLD++AKARGI+AAE YFV LPE SKNHL
Sbjct: 65 LRDRKLYQPALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHL 124
Query: 424 CYGALLNCYCKELMTDKAEALMEKMKELGFASSSMAYNSLMTLYTKIGQPEKVPAIIQEM 603
CYGALLNCYCKELMT+K+E LMEKMKEL SSM YNSLMTLYTK+GQPEK+P++IQEM
Sbjct: 125 CYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEM 184
Query: 604 KASEITPDSYTYNVWMRALAAVSDISGVERVIEEMTTDGQVAGDWTTYSNLASIYVNAGM 783
KAS + DSYTYNVWMRALAAV+DISGVERV +EM GQV GDWTTYSNLASI+V+AG+
Sbjct: 185 KASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGL 244
Query: 784 FXXXXXXXXXXXXRNAFRDLSAYQFLITLYGRTGNLLEVYRIWRSLRLAFPKTANISYLN 963
F RNAF+DL+AYQFLITLYGRTGNL EVYR+WRSLRLAFPKTANISYLN
Sbjct: 245 FDKAEVALKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLN 304
Query: 964 MIQVLVNLKDLPGAEKCFHEWESVRSTYDIRIANALIGAYAKDGSLEKAETLAERARRSG 1143
MIQVLVNLKDLPGAEKCF EWE TYDIR+AN LI AY K LEKAE L ERARR G
Sbjct: 305 MIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRG 364
Query: 1144 AKPNVKTWEIFTEYHLNNGNTNLAVDCVASAISTGRGDGRKWIPPKEVVQALMSQFEQMK 1323
AKPN KT EIF +Y+L G+ LAVD + AIS GRG+G KW+P ++ +M FEQ K
Sbjct: 365 AKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEK 424
Query: 1324 DVEGATNFLETLSKVEYVLGADVFESLIRTYAAAGRTSPSLRRRLKMENVEVSEAAKK 1497
DV+GA FLE L K G +VFESLIRTYAAAGR S +++RRLKMENVEVSE +K
Sbjct: 425 DVDGAEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGTQK 482
>emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 636 bits (1641), Expect = e-180
Identities = 330/480 (68%), Positives = 369/480 (76%)
Frame = +1
Query: 58 MAQLFGRTKNIANRSKKYLDEALHKKLFREGSSDKSVRSELNQFLNSKKRVYKWEVGMSV 237
M QL RTKNIA RSKKYL+EAL+ +LF++GSS+ SVR +LN FL S KRV+KWEVG +V
Sbjct: 3 MPQL-SRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTV 61
Query: 238 KKLRQRKRFAPAMKLAENMAKRGMNMTVSDQAIHLDIIAKARGISAAETYFVDLPEASKN 417
KKLR RKRF PA+KL+E MAKRGMNMT+SDQAI+LD+I K RG++AAE YF+DLPE SKN
Sbjct: 62 KKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKN 121
Query: 418 HLCYGALLNCYCKELMTDKAEALMEKMKELGFASSSMAYNSLMTLYTKIGQPEKVPAIIQ 597
HL YGALLNCYCKEL+T+KAEALME+MKEL SSM YNSLMTLYTKIGQPEK+P IIQ
Sbjct: 122 HLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQ 181
Query: 598 EMKASEITPDSYTYNVWMRALAAVSDISGVERVIEEMTTDGQVAGDWTTYSNLASIYVNA 777
E+K+ +I PDSYTYN+WMRALAAV+DISGVERVIEEM DG+VA DWTTYSNLASIYV+A
Sbjct: 182 ELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDA 241
Query: 778 GMFXXXXXXXXXXXXRNAFRDLSAYQFLITLYGRTGNLLEVYRIWRSLRLAFPKTANISY 957
G+F RNA RDL+A+QFLITLYGR GNLLEVYR+WRSLRLAFPKTAN+SY
Sbjct: 242 GVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSY 301
Query: 958 LNMIQVLVNLKDLPGAEKCFHEWESVRSTYDIRIANALIGAYAKDGSLEKAETLAERARR 1137
LNMIQVLVNLKDLPGAEKCF EWES S YDIR+ANALIGAYAKDG LEKAE L E ARR
Sbjct: 302 LNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARR 361
Query: 1138 SGAKPNVKTWEIFTEYHLNNGNTNLAVDCVASAISTGRGDGRKWIPPKEVVQALMSQFEQ 1317
GAKPN KTWEIF YHL N AVDCVA+AIST
Sbjct: 362 RGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAIST------------------------ 397
Query: 1318 MKDVEGATNFLETLSKVEYVLGADVFESLIRTYAAAGRTSPSLRRRLKMENVEVSEAAKK 1497
G +VFESLIR YAAAGRTSP +RRRLKMENVEVS++ KK
Sbjct: 398 ---------------------GVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKK 436