BLASTX nr result

ID: Cimicifuga21_contig00017832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017832
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17878.3| unnamed protein product [Vitis vinifera]              485   e-134
ref|XP_002265761.1| PREDICTED: uncharacterized membrane protein ...   485   e-134
gb|ACN40808.1| unknown [Picea sitchensis]                             433   e-119
ref|XP_003546448.1| PREDICTED: uncharacterized membrane protein ...   420   e-115
ref|XP_003533746.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   418   e-114

>emb|CBI17878.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  485 bits (1248), Expect = e-134
 Identities = 246/302 (81%), Positives = 261/302 (86%)
 Frame = -1

Query: 1182 LVLGRVGFNFPILLTFIHYAVSWFLMATLKAISVFPASPPSKSTPFSSLLALGIVMSLSN 1003
            LVLGRVGFN+PI LTFIHY +SW LMA L A+S+ PA+PPSKSTPFSSLL+LGIVMSLSN
Sbjct: 75   LVLGRVGFNYPIFLTFIHYTLSWLLMAILNALSMLPAAPPSKSTPFSSLLSLGIVMSLSN 134

Query: 1002 GLANVSLKYNSVGFYQMAKIAVTPTIVLAEFLFFSKRVSYKKVLALAVVSIGVAVATVTD 823
            GLANVSLKYNSVGFYQMAKIAVTPTIVLAEF+ F+KRVS +KVLAL VVSIGVAVATVTD
Sbjct: 135  GLANVSLKYNSVGFYQMAKIAVTPTIVLAEFILFAKRVSCQKVLALTVVSIGVAVATVTD 194

Query: 822  LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITLLFLVTMMPWLDP 643
            LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITL FLVT+MPWLDP
Sbjct: 195  LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITLFFLVTLMPWLDP 254

Query: 642  PGVLSFNWDFNNTSAIIMSAVLGFLLQWXXXXXXXXXXXXTHVVLGQFKTCVILLGGFLL 463
            PG+LSF W+ NNT AI+MSAVLGFLLQW            THVVLGQFKTCVILLGGF L
Sbjct: 255  PGILSFGWNLNNTLAILMSAVLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGFFL 314

Query: 462  FGSNPGTTSIGGAIAALFGMSVYTYLNLQGSQQQPTKTSARQTSFPLTKSKLSKENGNDD 283
            FGSNPGT SI GA  AL GMSVYTYLNL   QQ P KTS RQ SF L+KSKLSKENG+  
Sbjct: 315  FGSNPGTISICGATTALAGMSVYTYLNLLKPQQLPNKTSPRQNSFTLSKSKLSKENGDTH 374

Query: 282  DG 277
            DG
Sbjct: 375  DG 376


>ref|XP_002265761.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis
            vinifera]
          Length = 388

 Score =  485 bits (1248), Expect = e-134
 Identities = 246/302 (81%), Positives = 261/302 (86%)
 Frame = -1

Query: 1182 LVLGRVGFNFPILLTFIHYAVSWFLMATLKAISVFPASPPSKSTPFSSLLALGIVMSLSN 1003
            LVLGRVGFN+PI LTFIHY +SW LMA L A+S+ PA+PPSKSTPFSSLL+LGIVMSLSN
Sbjct: 81   LVLGRVGFNYPIFLTFIHYTLSWLLMAILNALSMLPAAPPSKSTPFSSLLSLGIVMSLSN 140

Query: 1002 GLANVSLKYNSVGFYQMAKIAVTPTIVLAEFLFFSKRVSYKKVLALAVVSIGVAVATVTD 823
            GLANVSLKYNSVGFYQMAKIAVTPTIVLAEF+ F+KRVS +KVLAL VVSIGVAVATVTD
Sbjct: 141  GLANVSLKYNSVGFYQMAKIAVTPTIVLAEFILFAKRVSCQKVLALTVVSIGVAVATVTD 200

Query: 822  LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITLLFLVTMMPWLDP 643
            LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITL FLVT+MPWLDP
Sbjct: 201  LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITLFFLVTLMPWLDP 260

Query: 642  PGVLSFNWDFNNTSAIIMSAVLGFLLQWXXXXXXXXXXXXTHVVLGQFKTCVILLGGFLL 463
            PG+LSF W+ NNT AI+MSAVLGFLLQW            THVVLGQFKTCVILLGGF L
Sbjct: 261  PGILSFGWNLNNTLAILMSAVLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGFFL 320

Query: 462  FGSNPGTTSIGGAIAALFGMSVYTYLNLQGSQQQPTKTSARQTSFPLTKSKLSKENGNDD 283
            FGSNPGT SI GA  AL GMSVYTYLNL   QQ P KTS RQ SF L+KSKLSKENG+  
Sbjct: 321  FGSNPGTISICGATTALAGMSVYTYLNLLKPQQLPNKTSPRQNSFTLSKSKLSKENGDTH 380

Query: 282  DG 277
            DG
Sbjct: 381  DG 382


>gb|ACN40808.1| unknown [Picea sitchensis]
          Length = 393

 Score =  433 bits (1114), Expect = e-119
 Identities = 217/310 (70%), Positives = 251/310 (80%), Gaps = 1/310 (0%)
 Frame = -1

Query: 1182 LVLGRVGFNFPILLTFIHYAVSWFLMATLKAISVFPASPPSKSTPFSSLLALGIVMSLSN 1003
            L+LG+VGFN+PI LT IHYA+SW L+A+L A ++ PASPP+K+TPF+SL++LG+VM+ SN
Sbjct: 84   LLLGKVGFNYPIFLTLIHYALSWLLLASLNACALLPASPPAKATPFTSLISLGVVMAFSN 143

Query: 1002 GLANVSLKYNSVGFYQMAKIAVTPTIVLAEFLFFSKRVSYKKVLALAVVSIGVAVATVTD 823
            GLANVSLKYNSVGFYQMAKIAVTPTIVL+EFLFF KRVS++KVLAL VVS+GVAVATVTD
Sbjct: 144  GLANVSLKYNSVGFYQMAKIAVTPTIVLSEFLFFGKRVSFQKVLALTVVSLGVAVATVTD 203

Query: 822  LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITLLFLVTMMPWLDP 643
            LQF+ FGA +ALAWI+PSA NKILWSNLQQQ+NWTALALMWKTTPIT+  LV +MPWLDP
Sbjct: 204  LQFNLFGALVALAWIVPSAANKILWSNLQQQDNWTALALMWKTTPITIFTLVAVMPWLDP 263

Query: 642  PGVLSFNWDFNNTSAIIMSAVLGFLLQWXXXXXXXXXXXXTHVVLGQFKTCVILLGGFLL 463
            PG+LSFNW+ +N  AII SA LGFLLQW            THVVLGQFKTCVILLGGFLL
Sbjct: 264  PGLLSFNWNISNVLAIIFSATLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGFLL 323

Query: 462  FGSNPGTTSIGGAIAALFGMSVYTYLNL-QGSQQQPTKTSARQTSFPLTKSKLSKENGND 286
            F SNPG +SIGGA  AL  MSVYTYLNL + S+        +Q SF   K K+SK N N 
Sbjct: 324  FQSNPGMSSIGGAAVALGAMSVYTYLNLIEASESVGKPLVLKQNSFSSVKGKVSKANDNS 383

Query: 285  DDGHRGAEAV 256
             DG+ GAE V
Sbjct: 384  HDGNEGAEFV 393


>ref|XP_003546448.1| PREDICTED: uncharacterized membrane protein At1g06890-like isoform 1
            [Glycine max]
          Length = 379

 Score =  420 bits (1079), Expect = e-115
 Identities = 215/309 (69%), Positives = 242/309 (78%)
 Frame = -1

Query: 1182 LVLGRVGFNFPILLTFIHYAVSWFLMATLKAISVFPASPPSKSTPFSSLLALGIVMSLSN 1003
            +VL  V F FPILLT IHY VSWFLMA LKA S  PA+P SKST  S+L  LG VMSLS 
Sbjct: 75   MVLQTVQFKFPILLTLIHYVVSWFLMAILKAFSFLPAAPSSKSTRLSTLFTLGFVMSLST 134

Query: 1002 GLANVSLKYNSVGFYQMAKIAVTPTIVLAEFLFFSKRVSYKKVLALAVVSIGVAVATVTD 823
            G ANVSLKYNS+GFYQMAKIAVTP+IVLAEF+ + K+VS+ K LAL VVSIGVAVATVTD
Sbjct: 135  GFANVSLKYNSIGFYQMAKIAVTPSIVLAEFVLYRKKVSFAKALALTVVSIGVAVATVTD 194

Query: 822  LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITLLFLVTMMPWLDP 643
            LQFH FGAC+ALAWI+PSAVNKILWS LQQQENWTAL+LMWKTTPITL+FL  M+P LDP
Sbjct: 195  LQFHVFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPITLIFLAAMLPCLDP 254

Query: 642  PGVLSFNWDFNNTSAIIMSAVLGFLLQWXXXXXXXXXXXXTHVVLGQFKTCVILLGGFLL 463
            PGVLSF+W+F+N+  I  SA+LGFLLQW            +HVVLGQFKTCV+LLG + L
Sbjct: 255  PGVLSFDWNFSNSMVIFASAILGFLLQWSGALALGATSAISHVVLGQFKTCVLLLGNYYL 314

Query: 462  FGSNPGTTSIGGAIAALFGMSVYTYLNLQGSQQQPTKTSARQTSFPLTKSKLSKENGNDD 283
            FGSNPG  SI GA  A+ GMSVYTYLN+   +QQ  K S RQ S  L KSKL KENG+  
Sbjct: 315  FGSNPGKISICGAFTAIAGMSVYTYLNM---RQQSNKPSPRQASV-LPKSKLGKENGSTH 370

Query: 282  DGHRGAEAV 256
            DGH GAE+V
Sbjct: 371  DGHYGAESV 379


>ref|XP_003533746.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized membrane protein
            At1g06890-like [Glycine max]
          Length = 378

 Score =  418 bits (1075), Expect = e-114
 Identities = 213/309 (68%), Positives = 242/309 (78%)
 Frame = -1

Query: 1182 LVLGRVGFNFPILLTFIHYAVSWFLMATLKAISVFPASPPSKSTPFSSLLALGIVMSLSN 1003
            +VL  V F FPILLT IHY VSWFLMA LKA S  PA+P SKST  S+L  LG VMSLS 
Sbjct: 75   MVLQTVQFKFPILLTLIHYVVSWFLMAILKAFSFLPAAPSSKSTRLSTLFTLGFVMSLST 134

Query: 1002 GLANVSLKYNSVGFYQMAKIAVTPTIVLAEFLFFSKRVSYKKVLALAVVSIGVAVATVTD 823
            G ANVSLKYNS+GFYQMAKIAVTP+IVLAEF+ + K+VS+ K LAL +VSIGVAVATVTD
Sbjct: 135  GFANVSLKYNSIGFYQMAKIAVTPSIVLAEFVLYRKKVSFAKALALTMVSIGVAVATVTD 194

Query: 822  LQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPITLLFLVTMMPWLDP 643
            LQFH FGAC+ALAWI+PSAVNKILWS LQQQENWTAL+LMWKTTPITL+FL  M+P LDP
Sbjct: 195  LQFHVFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPITLIFLAAMLPCLDP 254

Query: 642  PGVLSFNWDFNNTSAIIMSAVLGFLLQWXXXXXXXXXXXXTHVVLGQFKTCVILLGGFLL 463
            PGVLSF+W+F+N+  I  SA+LGFLLQW            +HVVLGQFKTCV+LLG + L
Sbjct: 255  PGVLSFDWNFSNSMVIFASAILGFLLQWSGALALGATSAISHVVLGQFKTCVLLLGNYYL 314

Query: 462  FGSNPGTTSIGGAIAALFGMSVYTYLNLQGSQQQPTKTSARQTSFPLTKSKLSKENGNDD 283
            FGSNPG  SI GA  A+ GMSVYTYLN+   +QQ  K S RQ+  P  KSKL KENG+  
Sbjct: 315  FGSNPGKISICGAFTAIAGMSVYTYLNM---RQQSNKPSPRQSVLP--KSKLGKENGSTH 369

Query: 282  DGHRGAEAV 256
            DGH GAE+V
Sbjct: 370  DGHYGAESV 378


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