BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017826
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627527.1| Pentatricopeptide repeat-containing protein ...   138   5e-31
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
emb|CBI40590.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...   124   6e-27
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27

>ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355521549|gb|AET02003.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/86 (76%), Positives = 75/86 (87%)
 Frame = -3

Query: 258 EKTVKPNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRID 79
           EK V PNEVT+ASVLPACANLGALE+G+R+EV  R  GF KNLFV NA+LEMYAKCG+ID
Sbjct: 205 EKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKID 264

Query: 78  KAGRLFEEIGRARNLCSWNSMIMGLA 1
            A ++F+EIGR RNLCSWNSMIMGLA
Sbjct: 265 VAWKVFDEIGRFRNLCSWNSMIMGLA 290



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/79 (35%), Positives = 45/79 (56%)
 Frame = -3

Query: 243 PNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRIDKAGRL 64
           PN+ T   +   C +L +L +G+ I       GF  ++F S ALL+MYAK G +  A  +
Sbjct: 77  PNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNV 136

Query: 63  FEEIGRARNLCSWNSMIMG 7
           F+E+   + L +WN+M+ G
Sbjct: 137 FDEMS-VKELATWNAMMAG 154


>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/86 (76%), Positives = 74/86 (86%)
 Frame = -3

Query: 258 EKTVKPNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRID 79
           E  ++PNEVT+ASVLPACANLGALE+GERIEV  R  G+ KNL+VSNALLEMYA+CGRID
Sbjct: 208 ETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRID 267

Query: 78  KAGRLFEEIGRARNLCSWNSMIMGLA 1
           KA  +FEEI   RNLCSWNSMIMGLA
Sbjct: 268 KAWGVFEEIDGRRNLCSWNSMIMGLA 293



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%)
 Frame = -3

Query: 243 PNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRIDKAGRL 64
           PNE +   +  ACA+L + + G  +       GFG ++F   AL++MYAK G +  A + 
Sbjct: 80  PNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQ 139

Query: 63  FEEIGRARNLCSWNSMIMGLA 1
           F+E+   R++ +WNSMI G A
Sbjct: 140 FDEM-TVRDVPTWNSMIAGYA 159


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/86 (76%), Positives = 74/86 (86%)
 Frame = -3

Query: 258 EKTVKPNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRID 79
           E  ++PNEVT+ASVLPACANLGALE+GERIEV  R  G+ KNL+VSNALLEMYA+CGRID
Sbjct: 208 ETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRID 267

Query: 78  KAGRLFEEIGRARNLCSWNSMIMGLA 1
           KA  +FEEI   RNLCSWNSMIMGLA
Sbjct: 268 KAWGVFEEIDGRRNLCSWNSMIMGLA 293



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%)
 Frame = -3

Query: 243 PNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRIDKAGRL 64
           PNE +   +  ACA+L + + G  +       GFG ++F   AL++MYAK G +  A + 
Sbjct: 80  PNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQ 139

Query: 63  FEEIGRARNLCSWNSMIMGLA 1
           F+E+   R++ +WNSMI G A
Sbjct: 140 FDEM-TVRDVPTWNSMIAGYA 159


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/87 (68%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
 Frame = -3

Query: 258 EKTVKPNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRID 79
           E  ++PNEVTIAS+LPACANLGALE+G+RIE   R  G  +NL+VSNALLEMYA+CG+ID
Sbjct: 208 ENGLRPNEVTIASILPACANLGALEVGDRIETYARENGLLRNLYVSNALLEMYARCGKID 267

Query: 78  KAGRLFEE-IGRARNLCSWNSMIMGLA 1
            A ++F++ IG+ RNLCSWNSMIMGLA
Sbjct: 268 MARKVFDKIIGKRRNLCSWNSMIMGLA 294


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/86 (68%), Positives = 70/86 (81%)
 Frame = -3

Query: 258 EKTVKPNEVTIASVLPACANLGALEMGERIEVLVRMKGFGKNLFVSNALLEMYAKCGRID 79
           EK + PN VT+AS+ PA ANLGALE+G+R+E   R  GF KNL+VSNA+LEMYAKCG+ID
Sbjct: 209 EKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKID 268

Query: 78  KAGRLFEEIGRARNLCSWNSMIMGLA 1
            A ++F EIG  RNLCSWNSMIMGLA
Sbjct: 269 VAWKVFNEIGSLRNLCSWNSMIMGLA 294