BLASTX nr result

ID: Cimicifuga21_contig00017786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017786
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28546.3| unnamed protein product [Vitis vinifera]              296   9e-78
ref|XP_002265114.1| PREDICTED: uncharacterized protein LOC100267...   295   1e-77
ref|XP_002315691.1| predicted protein [Populus trichocarpa] gi|2...   289   1e-75
emb|CCD74514.1| uncharacterized protein [Arabidopsis halleri sub...   267   3e-69
gb|AAV68844.1| hypothetical protein AT1G60460 [Arabidopsis thali...   266   8e-69

>emb|CBI28546.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  296 bits (757), Expect = 9e-78
 Identities = 159/302 (52%), Positives = 204/302 (67%), Gaps = 2/302 (0%)
 Frame = +3

Query: 6   VAVELMVDRNSDTGSRCESMFLANEGIHLPCFMSNIERLISGLEDHVLKHGNTLDKECQS 185
           +A+EL+++     GSR  +   ANE  HLP  MSNIE L SGLED V KHGN+L+++C S
Sbjct: 168 IAIELVIEHGDIRGSRYGNFIQANECNHLPSPMSNIECLKSGLEDFVCKHGNSLNEKCFS 227

Query: 186 CFSSREHLKVGTGTAFNSEGLRKTGXXXXXXXXXXXXXXXSSPSCLKERDTKTEVFYYQD 365
           CF +REHLKVG+G A  +E  R TG                            +V  + D
Sbjct: 228 CFPNREHLKVGSGLACRAESQRSTG----------------------------QVLCFYD 259

Query: 366 FLPNAIPQSLLNSLTSIDWKSYGLSLRSSVVGEDGHPVLEWENLPPYSHIDIAIHCYHKQ 545
           F P AI QS +N+L SIDWK+YGL+LRS  V ++G  +LEWE+LP Y+HIDI +HCYHKQ
Sbjct: 260 FSPCAISQSSMNALISIDWKNYGLTLRS-FVDQNGSALLEWEDLPTYAHIDIVLHCYHKQ 318

Query: 546 TVILQMR--RKIHFDRNLLKKAVKLAMDDLKEKYAGILLSAHATKIQSYAPDLAKTLAGL 719
             +L     RK   DRNL+KKAVKLA+DDLK KY G+LLSAHA KI SYAPDLA+++ GL
Sbjct: 319 YPLLYFMHLRKTELDRNLIKKAVKLALDDLKAKYTGLLLSAHALKICSYAPDLARSITGL 378

Query: 720 IFSSDDTEFQGECVSLLGFERQESDKEKVQDCIREKITSVIGMNDRKPQKNREAARFLFE 899
           I SS D++FQ EC+SLLG + QE +   V+D I+EKI SV+ +NDRKPQ++REA  FLFE
Sbjct: 379 ILSSSDSDFQKECLSLLGLQSQEVEGGIVEDRIKEKIISVVEINDRKPQRSREAPSFLFE 438

Query: 900 DE 905
           ++
Sbjct: 439 ND 440


>ref|XP_002265114.1| PREDICTED: uncharacterized protein LOC100267199 [Vitis vinifera]
          Length = 456

 Score =  295 bits (756), Expect = 1e-77
 Identities = 158/300 (52%), Positives = 204/300 (68%)
 Frame = +3

Query: 6   VAVELMVDRNSDTGSRCESMFLANEGIHLPCFMSNIERLISGLEDHVLKHGNTLDKECQS 185
           +A+EL+++     GSR  +   ANE  HLP  MSNIE L SGLED V KHGN+L+++C S
Sbjct: 164 IAIELVIEHGDIRGSRYGNFIQANECNHLPSPMSNIECLKSGLEDFVCKHGNSLNEKCFS 223

Query: 186 CFSSREHLKVGTGTAFNSEGLRKTGXXXXXXXXXXXXXXXSSPSCLKERDTKTEVFYYQD 365
           CF +REHLKVG+G A  +E  R TG                          + +V  + D
Sbjct: 224 CFPNREHLKVGSGLACRAESQRSTG--------------------------QFQVLCFYD 257

Query: 366 FLPNAIPQSLLNSLTSIDWKSYGLSLRSSVVGEDGHPVLEWENLPPYSHIDIAIHCYHKQ 545
           F P AI QS +N+L SIDWK+YGL+LRS  V ++G  +LEWE+LP Y+HIDI +HCYHKQ
Sbjct: 258 FSPCAISQSSMNALISIDWKNYGLTLRS-FVDQNGSALLEWEDLPTYAHIDIVLHCYHKQ 316

Query: 546 TVILQMRRKIHFDRNLLKKAVKLAMDDLKEKYAGILLSAHATKIQSYAPDLAKTLAGLIF 725
                 +RK   DRNL+KKAVKLA+DDLK KY G+LLSAHA KI SYAPDLA+++ GLI 
Sbjct: 317 ---YPSKRKTELDRNLIKKAVKLALDDLKAKYTGLLLSAHALKICSYAPDLARSITGLIL 373

Query: 726 SSDDTEFQGECVSLLGFERQESDKEKVQDCIREKITSVIGMNDRKPQKNREAARFLFEDE 905
           SS D++FQ EC+SLLG + QE +   V+D I+EKI SV+ +NDRKPQ++REA  FLFE++
Sbjct: 374 SSSDSDFQKECLSLLGLQSQEVEGGIVEDRIKEKIISVVEINDRKPQRSREAPSFLFEND 433


>ref|XP_002315691.1| predicted protein [Populus trichocarpa] gi|222864731|gb|EEF01862.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  289 bits (739), Expect = 1e-75
 Identities = 151/300 (50%), Positives = 209/300 (69%)
 Frame = +3

Query: 6   VAVELMVDRNSDTGSRCESMFLANEGIHLPCFMSNIERLISGLEDHVLKHGNTLDKECQS 185
           +A+EL+++R    GSRCE++FLAN     P   SN+E L SGLED+VLKHGN+L ++C +
Sbjct: 73  IAIELLIEREDIPGSRCENVFLANRSNPGPLSTSNVEFLKSGLEDYVLKHGNSLTQKCST 132

Query: 186 CFSSREHLKVGTGTAFNSEGLRKTGXXXXXXXXXXXXXXXSSPSCLKERDTKTEVFYYQD 365
           CF++ E LKVG+G A ++E  + +G               S+  C +E  +KTEV Y++D
Sbjct: 133 CFATSECLKVGSGIACSTESHKSSGLMMEVVIIISEIE--STCPCFRECSSKTEVLYFKD 190

Query: 366 FLPNAIPQSLLNSLTSIDWKSYGLSLRSSVVGEDGHPVLEWENLPPYSHIDIAIHCYHKQ 545
           F P +I  S LN L++IDWKSYGL+L + V  + G  VLEWE+ P +S ID+ +HCYHKQ
Sbjct: 191 FTPCSISHSTLNVLSTIDWKSYGLTLENVV--DQGVCVLEWEDSPSHSQIDMVLHCYHKQ 248

Query: 546 TVILQMRRKIHFDRNLLKKAVKLAMDDLKEKYAGILLSAHATKIQSYAPDLAKTLAGLIF 725
             +     K   +R+L+KKAVK A+++LKEK+ GILLSAHA KI S+APDLA+++AGLI 
Sbjct: 249 YPM----HKTQLERHLIKKAVKAALNNLKEKHPGILLSAHALKICSHAPDLARSIAGLIL 304

Query: 726 SSDDTEFQGECVSLLGFERQESDKEKVQDCIREKITSVIGMNDRKPQKNREAARFLFEDE 905
           SS+D +FQGEC SLLG + +E   + V+DCI+EKI SVI MNDRK ++ +  A FLFED+
Sbjct: 305 SSNDPDFQGECFSLLGLQSREIGADVVEDCIQEKIVSVIEMNDRKSRQRKVVAPFLFEDD 364


>emb|CCD74514.1| uncharacterized protein [Arabidopsis halleri subsp. halleri]
          Length = 537

 Score =  267 bits (683), Expect = 3e-69
 Identities = 143/300 (47%), Positives = 196/300 (65%), Gaps = 1/300 (0%)
 Frame = +3

Query: 6    VAVELMVDRNSDTGSRCESMFLANEGIHLPCFM-SNIERLISGLEDHVLKHGNTLDKECQ 182
            V +++MV +    G++ + +F  N     PCF  SN+ERL SGLED+VL+HGN LD  C 
Sbjct: 173  VTMDMMVKQGDSPGNQTQYVFAVNAD-KTPCFTASNLERLKSGLEDYVLRHGNCLDTMCD 231

Query: 183  SCFSSREHLKVGTGTAFNSEGLRKTGXXXXXXXXXXXXXXXSSPSCLKERDTKTEVFYYQ 362
             CFS REHLKVG+GT    +  ++ G               ++  C +  D KTEV Y+ 
Sbjct: 232  YCFSDREHLKVGSGTVCQEDKHKRVGGTMEVVIVISDLLE-TTQHCSRSCDGKTEVLYFD 290

Query: 363  DFLPNAIPQSLLNSLTSIDWKSYGLSLRSSVVGEDGHPVLEWENLPPYSHIDIAIHCYHK 542
            +F P  +P   L++L  IDWK+YGL L S+V  +DGH  LEWEN P Y  I I++H YH 
Sbjct: 291  NFSPFPVPHLALSALRKIDWKNYGLIL-SNVNDQDGHVFLEWENFPSYVQIQISLHWYHN 349

Query: 543  QTVILQMRRKIHFDRNLLKKAVKLAMDDLKEKYAGILLSAHATKIQSYAPDLAKTLAGLI 722
            Q      R+K     +LLKK +K A+D+LK K+ G LLS+HA KI SY PDLA+++AGLI
Sbjct: 350  QC---PARQKNGPGISLLKKGIKNALDNLKAKHEGFLLSSHARKICSYVPDLARSIAGLI 406

Query: 723  FSSDDTEFQGECVSLLGFERQESDKEKVQDCIREKITSVIGMNDRKPQKNREAARFLFED 902
            FSS D +FQG+C+S+LGF+ Q+ +++ V+D I+ KI +VIGMN+RKPQK++EAA FLF D
Sbjct: 407  FSSTDLDFQGDCLSVLGFQTQKVERDTVEDYIQRKIVTVIGMNERKPQKDQEAAPFLFFD 466


>gb|AAV68844.1| hypothetical protein AT1G60460 [Arabidopsis thaliana]
          Length = 319

 Score =  266 bits (680), Expect = 8e-69
 Identities = 142/300 (47%), Positives = 197/300 (65%), Gaps = 1/300 (0%)
 Frame = +3

Query: 6   VAVELMVDRNSDTGSRCESMFLANEGIHLPCFM-SNIERLISGLEDHVLKHGNTLDKECQ 182
           V ++LMV + +  G++ + +F  N     PCF  SN+ERL SGLED+VL+H N LD  C 
Sbjct: 3   VTLDLMVKQGTSPGNQTQYVFAVNAD-KTPCFTASNLERLKSGLEDYVLRHANCLDTMCD 61

Query: 183 SCFSSREHLKVGTGTAFNSEGLRKTGXXXXXXXXXXXXXXXSSPSCLKERDTKTEVFYYQ 362
            CFS REHLKVG+GT    +  ++ G               S+  C +  + KTEV Y+ 
Sbjct: 62  YCFSDREHLKVGSGTVCQEDKHKRVGGTMEVVIVISDLLE-STQHCSRSCNGKTEVLYFD 120

Query: 363 DFLPNAIPQSLLNSLTSIDWKSYGLSLRSSVVGEDGHPVLEWENLPPYSHIDIAIHCYHK 542
           +FLP+ +P   L++L  IDWK YGL L ++V  +DGH  LEW+N P Y  I IA+H YH 
Sbjct: 121 NFLPSPVPHLALSALKKIDWKKYGLIL-ANVNDQDGHVFLEWDNFPSYVQIQIALHWYHN 179

Query: 543 QTVILQMRRKIHFDRNLLKKAVKLAMDDLKEKYAGILLSAHATKIQSYAPDLAKTLAGLI 722
           Q      R+K     +LLKK +K A+D+LK K+ G LLS+H+ KI SY PDLA+++AGLI
Sbjct: 180 Q---YPTRQKNGPGISLLKKGIKNALDNLKAKHEGFLLSSHSRKICSYVPDLARSIAGLI 236

Query: 723 FSSDDTEFQGECVSLLGFERQESDKEKVQDCIREKITSVIGMNDRKPQKNREAARFLFED 902
           FSS D +FQG+C+S+LGF+ QE +++ V++ I+ KI +VIGMN+RKPQK++EAA FLF D
Sbjct: 237 FSSTDLDFQGDCLSVLGFQTQEVERDTVENYIQRKIVTVIGMNERKPQKDQEAAPFLFFD 296


Top