BLASTX nr result

ID: Cimicifuga21_contig00017783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017783
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327533.1| multidrug resistance protein ABC transporter...    89   5e-16
ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...    88   8e-16
emb|CBI35971.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8...    87   1e-15
ref|XP_003627931.1| Multidrug resistance protein ABC transporter...    87   1e-15

>ref|XP_002327533.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222836087|gb|EEE74508.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1253

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/72 (58%), Positives = 51/72 (70%)
 Frame = +3

Query: 3    YLKLIDSDASLFFHSNATMEWLIIRVEALQNLTLFTAAILLVLLFKGTIAPGFIGXXXXX 182
            YLKL+D+DA LFFHSN  MEWL+IR EA+QN+TLFTAA+LL+LL KG + PG +G     
Sbjct: 889  YLKLVDNDAVLFFHSNGAMEWLVIRTEAIQNMTLFTAALLLILLPKGYVPPGLVGLSLSY 948

Query: 183  XXXXXXXQVFTT 218
                   QVF T
Sbjct: 949  ALSLTGTQVFMT 960


>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/55 (74%), Positives = 49/55 (89%)
 Frame = +3

Query: 3    YLKLIDSDASLFFHSNATMEWLIIRVEALQNLTLFTAAILLVLLFKGTIAPGFIG 167
            YLKLID+DA LFF+SNA MEWL++R+EALQNLTL TAA+LLVLL KG +APG +G
Sbjct: 1103 YLKLIDTDAKLFFYSNAAMEWLVLRIEALQNLTLVTAALLLVLLPKGYVAPGLVG 1157


>emb|CBI35971.3| unnamed protein product [Vitis vinifera]
          Length = 2772

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/55 (74%), Positives = 49/55 (89%)
 Frame = +3

Query: 3    YLKLIDSDASLFFHSNATMEWLIIRVEALQNLTLFTAAILLVLLFKGTIAPGFIG 167
            YLKLID+DA LFF+SNA MEWL++R+EALQNLTL TAA+LLVLL KG +APG +G
Sbjct: 1031 YLKLIDTDAKLFFYSNAAMEWLVLRIEALQNLTLVTAALLLVLLPKGYVAPGLVG 1085



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 50/70 (71%)
 Frame = +3

Query: 3    YLKLIDSDASLFFHSNATMEWLIIRVEALQNLTLFTAAILLVLLFKGTIAPGFIGXXXXX 182
            YL+LID+DA LFF+SNA +EWL++R+E LQNLTL TAA+LLVLL KG + PG +G     
Sbjct: 2405 YLELIDTDAKLFFYSNAAIEWLVLRIEMLQNLTLVTAALLLVLLPKGVVVPGLVGLSLSY 2464

Query: 183  XXXXXXXQVF 212
                   QVF
Sbjct: 2465 ALALTGSQVF 2474


>ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1469

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/55 (70%), Positives = 49/55 (89%)
 Frame = +3

Query: 3    YLKLIDSDASLFFHSNATMEWLIIRVEALQNLTLFTAAILLVLLFKGTIAPGFIG 167
            YL L+D+DA++FFHSNA +EWLI+R+E LQNLTLFTAA+LLVLL KG +APG +G
Sbjct: 1106 YLNLVDTDATMFFHSNAAIEWLILRIELLQNLTLFTAALLLVLLPKGYVAPGLVG 1160


>ref|XP_003627931.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355521953|gb|AET02407.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1306

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/72 (54%), Positives = 53/72 (73%)
 Frame = +3

Query: 3    YLKLIDSDASLFFHSNATMEWLIIRVEALQNLTLFTAAILLVLLFKGTIAPGFIGXXXXX 182
            YLKL+D+DASLFFHSN  MEW+++RVEALQNLT+ TAA+L++LL +G ++PG +G     
Sbjct: 913  YLKLVDTDASLFFHSNVAMEWVVVRVEALQNLTVITAALLIILLPRGYVSPGLVGLSLSY 972

Query: 183  XXXXXXXQVFTT 218
                   Q+F T
Sbjct: 973  AFTLTGAQIFWT 984


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