BLASTX nr result

ID: Cimicifuga21_contig00017724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017724
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267778.1| PREDICTED: NAC domain-containing protein 7 [...   156   2e-36
gb|ADR00341.1| wood-associated NAC domain transcription factor 6...   145   4e-33
dbj|BAK14364.1| transcription factor [Populus trichocarpa]            139   2e-31
ref|XP_002327242.1| NAC domain protein, IPR003441 [Populus trich...   136   2e-30
ref|XP_003555427.1| PREDICTED: NAC domain-containing protein 7-l...   129   2e-28

>ref|XP_002267778.1| PREDICTED: NAC domain-containing protein 7 [Vitis vinifera]
           gi|296081146|emb|CBI18172.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
 Frame = +3

Query: 3   MRKTLVFYKGRAPNGKKTDWIMHEYRLQTSEDGPPQDEGWVVCRAFKKPSPSHKQRADAW 182
           MRKTLVFYKGRAPNG+KTDWIMHEYRLQTSE GPPQ+EGWVVCRAFKKP+ SHKQ  +AW
Sbjct: 109 MRKTLVFYKGRAPNGRKTDWIMHEYRLQTSEHGPPQEEGWVVCRAFKKPTSSHKQSYEAW 168

Query: 183 NHTYYLMDHEHFGNPTPSDFSSPMQLSDPCQGVNFHQ*SFGCDEQIRSRLTDLEHQXXXX 362
           +H YY+ D  H   P+     SPM +  P QG  F+Q  FG ++++      + +Q    
Sbjct: 169 SHAYYVRDSSHVEPPSLPATLSPMHMVHPNQG--FYQRYFGSEQELMYNHGIMNNQAFEI 226

Query: 363 XXXXXXXXXXXXXXKDGLLEHSGIAIQDY--RQKNDSKGEFIDWKTV 497
                            + EH+G+   +Y   + +D   ++IDWK +
Sbjct: 227 PQLDSPSALSPSLATKEVFEHNGMNNSEYFEDENSDHAKQYIDWKNL 273


>gb|ADR00341.1| wood-associated NAC domain transcription factor 6B [Populus
           trichocarpa] gi|327397096|dbj|BAK14365.1| transcription
           factor [Populus trichocarpa]
          Length = 322

 Score =  145 bits (365), Expect = 4e-33
 Identities = 78/168 (46%), Positives = 103/168 (61%), Gaps = 5/168 (2%)
 Frame = +3

Query: 3   MRKTLVFYKGRAPNGKKTDWIMHEYRLQTSEDGPPQDEGWVVCRAFKKPSPSHKQRADAW 182
           MRKTLVFYKGRAPNG+KTDWIMHEYRLQTSE GPPQ+EGWVVCRAFKKPSP+ +Q  +AW
Sbjct: 109 MRKTLVFYKGRAPNGRKTDWIMHEYRLQTSEHGPPQEEGWVVCRAFKKPSPNQRQGFEAW 168

Query: 183 NHTYYLMDHEHFGNPTPSD-FSSPMQLSDPCQGVNFHQ*SFGCDEQIRSRLTDLEHQ--- 350
           +H YYL D  H   P+ SD  ++   +  P QG +F Q  FG +  + S  T L++    
Sbjct: 169 SHAYYLNDINHARPPSFSDTVTTAHNMVRPNQGASFQQ-PFGSNSDLVSNQTFLDNNNQL 227

Query: 351 XXXXXXXXXXXXXXXXXXKDGLLEHSGIAIQDY-RQKNDSKGEFIDWK 491
                             K+G    +    +DY  +++++  ++IDWK
Sbjct: 228 VELPELDSPSTLSTSFAAKEGNFHQTN---EDYDEERSNNSSQYIDWK 272


>dbj|BAK14364.1| transcription factor [Populus trichocarpa]
          Length = 319

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/168 (44%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   MRKTLVFYKGRAPNGKKTDWIMHEYRLQTSEDGPPQDEGWVVCRAFKKPSPSHKQRADAW 182
           MRKTLVFYKGRAPNG+KTDWIMHEYRLQTSE GP Q+EGWVVCRAFKKP P+ +Q  +AW
Sbjct: 107 MRKTLVFYKGRAPNGRKTDWIMHEYRLQTSEHGPQQEEGWVVCRAFKKPIPNQRQGFEAW 166

Query: 183 NHTYYLMDHEHFGNPTPSDFSSPMQLSDPCQGVNFHQ*SFGCDEQIRSRLTDLEHQ---X 353
           NH YY+ +  H   P+ SD  +      P Q  +FHQ  F     + S    L++     
Sbjct: 167 NHAYYVNNINHARPPSFSDTVTTTHTVHPNQSASFHQ-PFSSSSDLISHQEFLDNNNRLV 225

Query: 354 XXXXXXXXXXXXXXXXXKDGLLEHSGIAIQDYRQKNDSKGEFIDWKTV 497
                            K+G    +     D R  N S  ++IDWK++
Sbjct: 226 ELPQLDSPSTLSTSFAPKEGNFHQTNEDYDDERSNNSS--QYIDWKSL 271


>ref|XP_002327242.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222835612|gb|EEE74047.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
           gi|312618440|gb|ADR00340.1| wood-associated NAC domain
           transcription factor 6A [Populus trichocarpa]
          Length = 319

 Score =  136 bits (342), Expect = 2e-30
 Identities = 74/168 (44%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   MRKTLVFYKGRAPNGKKTDWIMHEYRLQTSEDGPPQDEGWVVCRAFKKPSPSHKQRADAW 182
           MRKTLVFYKGRAPNG+KTDWIMHEYRLQTSE GP Q +GWVVCRAFKKP P+ +Q  +AW
Sbjct: 107 MRKTLVFYKGRAPNGRKTDWIMHEYRLQTSEHGPQQAKGWVVCRAFKKPIPNQRQGFEAW 166

Query: 183 NHTYYLMDHEHFGNPTPSDFSSPMQLSDPCQGVNFHQ*SFGCDEQIRSRLTDLEHQ---X 353
           NH YY+ +  H   P+ SD  +      P Q  +FHQ  F     + S    L++     
Sbjct: 167 NHAYYVNNINHARPPSFSDTVTTTHTVHPNQSASFHQ-PFSSSSDLISHQEFLDNNNRLV 225

Query: 354 XXXXXXXXXXXXXXXXXKDGLLEHSGIAIQDYRQKNDSKGEFIDWKTV 497
                            K+G    +     D R  N S  ++IDWK++
Sbjct: 226 ELPQLDSPSTLSTSFAPKEGNFHQTNEDYDDERSNNSS--QYIDWKSL 271


>ref|XP_003555427.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]
          Length = 352

 Score =  129 bits (324), Expect = 2e-28
 Identities = 72/182 (39%), Positives = 100/182 (54%), Gaps = 18/182 (9%)
 Frame = +3

Query: 3   MRKTLVFYKGRAPNGKKTDWIMHEYRLQTSEDGPPQDEGWVVCRAFKKPSPSHKQRADAW 182
           MRKTLVFYKGRAPNG+KTDWIMHEYR QTSE GPPQ+EGWVVCRAF+KPSPSH+Q  D W
Sbjct: 132 MRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHRQGFDPW 191

Query: 183 NHTYYLMDHEHFGNPTPSDFSSPMQLSD----------PCQGVNFHQ*SFGCDEQ----- 317
             T      +HF       ++ P+ ++D          P +G +F   SF  D Q     
Sbjct: 192 CST--SSQQQHFFRDQIQSYARPLSIADILNETNNVPHPVEGTSFSH-SFNSDNQQHLNN 248

Query: 318 -IRSRLTDLEHQXXXXXXXXXXXXXXXXXXKDGLLEHSGIAIQDY--RQKNDSKGEFIDW 488
            I ++   +  +                  +    +H+G+  ++Y   ++++S  + IDW
Sbjct: 249 IISNQTAIIMDKQLLELPQLDSPTASLAIKECNQQQHNGLTNEEYCSDERSNSSAQGIDW 308

Query: 489 KT 494
           K+
Sbjct: 309 KS 310


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