BLASTX nr result

ID: Cimicifuga21_contig00017686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017686
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282291.1| PREDICTED: dynein light chain, cytoplasmic-l...   165   4e-39
emb|CBI20313.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002268204.1| PREDICTED: dynein light chain [Vitis vinifer...   152   4e-35
ref|XP_002304408.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002510958.1| axonemal dynein light chain, putative [Ricin...   149   3e-34

>ref|XP_002282291.1| PREDICTED: dynein light chain, cytoplasmic-like [Vitis vinifera]
          Length = 135

 Score =  165 bits (418), Expect = 4e-39
 Identities = 86/140 (61%), Positives = 105/140 (75%), Gaps = 5/140 (3%)
 Frame = -2

Query: 501 MDKTNKGKEKAGELYPSRRKLVSSTYRPSVTDVKLAGIAISLRLRLRSADMPVNMQEHAL 322
           M+KT + KEK     PS+R++  +       +VKLA IAISL +RLRS+DMP  MQ+HAL
Sbjct: 1   MEKTEEMKEKQVAQMPSQRRIAPNL------EVKLAAIAISLNVRLRSSDMPPAMQDHAL 54

Query: 321 RYTRTLVDSAN-----KPTHIARSLKKEFDSVYGPAWHCVVGKSFGSFVTHSPGGFIYFS 157
           RY+R+LVD+        P+HIAR+LKKEFDSVYGPAWHCV G SFGSFVTHSPGGF+YFS
Sbjct: 55  RYSRSLVDAIPDATRPNPSHIARALKKEFDSVYGPAWHCVAGTSFGSFVTHSPGGFVYFS 114

Query: 156 HDSLSFLLFKTEVRPVIDPK 97
            DSL  LLFKTEV+ V +P+
Sbjct: 115 IDSLYILLFKTEVKLVTEPR 134


>emb|CBI20313.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  165 bits (418), Expect = 4e-39
 Identities = 86/140 (61%), Positives = 105/140 (75%), Gaps = 5/140 (3%)
 Frame = -2

Query: 501 MDKTNKGKEKAGELYPSRRKLVSSTYRPSVTDVKLAGIAISLRLRLRSADMPVNMQEHAL 322
           M+KT + KEK     PS+R++  +       +VKLA IAISL +RLRS+DMP  MQ+HAL
Sbjct: 70  MEKTEEMKEKQVAQMPSQRRIAPNL------EVKLAAIAISLNVRLRSSDMPPAMQDHAL 123

Query: 321 RYTRTLVDSAN-----KPTHIARSLKKEFDSVYGPAWHCVVGKSFGSFVTHSPGGFIYFS 157
           RY+R+LVD+        P+HIAR+LKKEFDSVYGPAWHCV G SFGSFVTHSPGGF+YFS
Sbjct: 124 RYSRSLVDAIPDATRPNPSHIARALKKEFDSVYGPAWHCVAGTSFGSFVTHSPGGFVYFS 183

Query: 156 HDSLSFLLFKTEVRPVIDPK 97
            DSL  LLFKTEV+ V +P+
Sbjct: 184 IDSLYILLFKTEVKLVTEPR 203


>ref|XP_002268204.1| PREDICTED: dynein light chain [Vitis vinifera]
           gi|296084214|emb|CBI24602.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  152 bits (384), Expect = 4e-35
 Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 5/122 (4%)
 Frame = -2

Query: 456 PSRRKL-VSSTYRPSVTDVKLAGIAISLRLRLRSADMPVNMQEHALRYTRTLVDSANK-- 286
           P RR L +    +P   +VKLA +A+ L +RLRSADM   MQE A RY R+L+D+ +   
Sbjct: 28  PLRRTLSLPPAAKPPPPEVKLAAVAVDLNVRLRSADMSAAMQERAFRYARSLLDAHSDNV 87

Query: 285 --PTHIARSLKKEFDSVYGPAWHCVVGKSFGSFVTHSPGGFIYFSHDSLSFLLFKTEVRP 112
             PTH+A  LKKEFD++YGPAWHC+VGKSFGSFVTHS GGF+YFS D LSFLLFKTEVRP
Sbjct: 88  PTPTHLAMRLKKEFDALYGPAWHCIVGKSFGSFVTHSSGGFVYFSIDKLSFLLFKTEVRP 147

Query: 111 VI 106
           +I
Sbjct: 148 II 149


>ref|XP_002304408.1| predicted protein [Populus trichocarpa] gi|222841840|gb|EEE79387.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  150 bits (380), Expect = 1e-34
 Identities = 81/143 (56%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
 Frame = -2

Query: 495 KTNKGKEKAGELYPSRRKLVSSTYRP---SVTDVKLAGIAISLRLRLRSADMPVNMQEHA 325
           +  K KE+   L P R   V     P   +  +V+LA IA+ L +RLRSADMP  MQEHA
Sbjct: 13  RMEKNKERVQFLPPGRMLPVPPMVGPPAAATNEVRLAAIAVELNIRLRSADMPGAMQEHA 72

Query: 324 LRYTRTLVDSAN------KPTHIARSLKKEFDSVYGPAWHCVVGKSFGSFVTHSPGGFIY 163
            R++R L+D+ N       PTHIA SLKKEFD++YG AWHC+VGKS+GSFVTHS GGF+Y
Sbjct: 73  FRFSRALLDANNLESKNPNPTHIAMSLKKEFDAMYGIAWHCIVGKSYGSFVTHSSGGFVY 132

Query: 162 FSHDSLSFLLFKTEVRPVIDPKP 94
           FS D+LSF LFKTEV+PV  P P
Sbjct: 133 FSVDNLSF-LFKTEVQPVKRPPP 154


>ref|XP_002510958.1| axonemal dynein light chain, putative [Ricinus communis]
           gi|223550073|gb|EEF51560.1| axonemal dynein light chain,
           putative [Ricinus communis]
          Length = 159

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/113 (66%), Positives = 85/113 (75%), Gaps = 4/113 (3%)
 Frame = -2

Query: 420 PSVTDVKLAGIAISLRLRLRSADMPVNMQEHALRYTRTLVDSANK----PTHIARSLKKE 253
           P     KLA IA+ L +RLRSA+MP  MQE A R TR ++D+  +    PTHIA  LKKE
Sbjct: 35  PPPNQAKLAAIAVDLNIRLRSAEMPGAMQERAFRCTRAVLDANLEKKLNPTHIAMCLKKE 94

Query: 252 FDSVYGPAWHCVVGKSFGSFVTHSPGGFIYFSHDSLSFLLFKTEVRPVIDPKP 94
           FD+VYGPAWHC+VGKSFGSFVTHS GGF+YFS D LSFLLFKTEVRPV  P P
Sbjct: 95  FDAVYGPAWHCIVGKSFGSFVTHSSGGFVYFSVDKLSFLLFKTEVRPVRKPLP 147


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