BLASTX nr result

ID: Cimicifuga21_contig00017678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017678
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus ...    55   6e-06
ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vi...    55   8e-06

>ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus communis]
           gi|223542267|gb|EEF43809.1| 50S ribosomal protein L4,
           putative [Ricinus communis]
          Length = 294

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = +3

Query: 306 EGGLCYFASKMFSTSILTPQSSEAGFPQELLSTKSVLTPDRKQGSYEDLI 455
           + G    A +  STSILTP SS+  FP +LLSTK++LTP+R+ G +EDL+
Sbjct: 35  KNGAASLACRKLSTSILTPGSSDDAFPSDLLSTKTLLTPEREIGLHEDLV 84


>ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vitis vinifera]
           gi|297741766|emb|CBI32995.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +3

Query: 312 GLCYFASKMFSTS-ILTPQSSEAGFPQELLSTKSVLTPDRKQGSYEDLI 455
           G  + +S+  ST+ ILTP+SS   FP ELLSTK+VLTP+R  G Y+DL+
Sbjct: 57  GSSFLSSRSLSTTTILTPESSGVAFPPELLSTKTVLTPERTPGHYQDLV 105


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