BLASTX nr result

ID: Cimicifuga21_contig00017628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017628
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278569.1| PREDICTED: casparian strip membrane protein ...   172   1e-40
sp|P0DI54.1|CSPL_MALDO RecName: Full=CASP-like protein 1              161   2e-37
ref|XP_002436759.1| hypothetical protein SORBIDRAFT_10g008220 [S...   159   5e-37
gb|AFW85233.1| membrane protein 2 [Zea mays]                          156   5e-36
ref|XP_002533115.1| conserved hypothetical protein [Ricinus comm...   155   8e-36

>ref|XP_002278569.1| PREDICTED: casparian strip membrane protein VIT_14s0108g01050
           [Vitis vinifera] gi|226713606|sp|A7PMY7.1|CASP3_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_14s0108g01050 gi|296082941|emb|CBI22242.3| unnamed
           protein product [Vitis vinifera]
          Length = 186

 Score =  172 bits (435), Expect = 1e-40
 Identities = 90/159 (56%), Positives = 109/159 (68%)
 Frame = +1

Query: 52  MKAGGSIELGEASSRASVHRRGMNKGASILDFVXXXXXXXXXXXXXXXMGTTDETLPFFT 231
           MKAG ++ELGE S + S+ R G+N+G SILDF+               MGTT+ETLPFFT
Sbjct: 1   MKAG-ALELGEGS-KTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFT 58

Query: 232 QFIRFKAEYNDLPSFTFFVVANSVVSAYLVLSLILSIYHISRTGSRNSRVVLIFFDTXXX 411
           QF +F+AEY+DLP+FTFFV+ANS+VS YLVLSL +SI HI R+G+R SR+VLIFFDT   
Sbjct: 59  QFTQFRAEYDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDTAML 118

Query: 412 XXXXXXXXXXXXXXXXXHKGNVRANWFAICQQFNSFCER 528
                            HKGN +ANWFAICQQF SFCER
Sbjct: 119 ALLTAAASAASAIVYLAHKGNAQANWFAICQQFKSFCER 157


>sp|P0DI54.1|CSPL_MALDO RecName: Full=CASP-like protein 1
          Length = 175

 Score =  161 bits (407), Expect = 2e-37
 Identities = 78/140 (55%), Positives = 95/140 (67%)
 Frame = +1

Query: 109 RRGMNKGASILDFVXXXXXXXXXXXXXXXMGTTDETLPFFTQFIRFKAEYNDLPSFTFFV 288
           R G+N+GASILDF+               MGTT E LPFFTQF++F+AEY+DLP+FTFFV
Sbjct: 7   RAGVNRGASILDFILRIVAFLGTLVSAVTMGTTRERLPFFTQFLQFRAEYDDLPTFTFFV 66

Query: 289 VANSVVSAYLVLSLILSIYHISRTGSRNSRVVLIFFDTXXXXXXXXXXXXXXXXXXXXHK 468
           VANS+V AYLV SL LS++HI R+ ++ SR++LIFFDT                    HK
Sbjct: 67  VANSIVCAYLVFSLALSVFHIIRSNAKKSRIILIFFDTAMLALLTAGASAAAAIVYLSHK 126

Query: 469 GNVRANWFAICQQFNSFCER 528
           GN +ANWFAICQQFNSFCER
Sbjct: 127 GNAKANWFAICQQFNSFCER 146


>ref|XP_002436759.1| hypothetical protein SORBIDRAFT_10g008220 [Sorghum bicolor]
           gi|288558954|sp|C5Z7E3.1|CASP2_SORBI RecName:
           Full=Casparian strip membrane protein Sb10g008220
           gi|241914982|gb|EER88126.1| hypothetical protein
           SORBIDRAFT_10g008220 [Sorghum bicolor]
          Length = 186

 Score =  159 bits (403), Expect = 5e-37
 Identities = 83/155 (53%), Positives = 100/155 (64%)
 Frame = +1

Query: 64  GSIELGEASSRASVHRRGMNKGASILDFVXXXXXXXXXXXXXXXMGTTDETLPFFTQFIR 243
           GS E GE S  A + R G++KG S+LD +               MGTT+ETLPFFTQFIR
Sbjct: 3   GSSEHGETSKAAPLGRGGVSKGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFIR 62

Query: 244 FKAEYNDLPSFTFFVVANSVVSAYLVLSLILSIYHISRTGSRNSRVVLIFFDTXXXXXXX 423
           FKA+Y+DLP+ TFFVVANS+V AYL+LSL LSI HI R+ ++ SR++LIF D        
Sbjct: 63  FKAQYSDLPTLTFFVVANSIVCAYLILSLPLSIVHIIRSRAKYSRLLLIFLDAAMLALVT 122

Query: 424 XXXXXXXXXXXXXHKGNVRANWFAICQQFNSFCER 528
                        HKGNVRANW AICQQF+SFCER
Sbjct: 123 AGASAAAAIVYLAHKGNVRANWLAICQQFDSFCER 157


>gb|AFW85233.1| membrane protein 2 [Zea mays]
          Length = 186

 Score =  156 bits (395), Expect = 5e-36
 Identities = 81/155 (52%), Positives = 99/155 (63%)
 Frame = +1

Query: 64  GSIELGEASSRASVHRRGMNKGASILDFVXXXXXXXXXXXXXXXMGTTDETLPFFTQFIR 243
           GS E GE S +A +  RG++KG S+LD +               MGTT+ETLPFFTQFIR
Sbjct: 3   GSSEHGETSKQAPLGSRGVSKGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFIR 62

Query: 244 FKAEYNDLPSFTFFVVANSVVSAYLVLSLILSIYHISRTGSRNSRVVLIFFDTXXXXXXX 423
           FKA+Y+DLP+ TFFVVANS+V AYL LSL LSI HI R+ ++ SR++L+  D        
Sbjct: 63  FKAQYSDLPTLTFFVVANSIVCAYLTLSLPLSIVHIIRSRAKYSRLLLVVLDAAMLALVT 122

Query: 424 XXXXXXXXXXXXXHKGNVRANWFAICQQFNSFCER 528
                        HKGNVRANW AICQQF+SFCER
Sbjct: 123 AGASAAAAIVYLAHKGNVRANWLAICQQFDSFCER 157


>ref|XP_002533115.1| conserved hypothetical protein [Ricinus communis]
           gi|238055372|sp|B9T4E6.1|CSPL3_RICCO RecName:
           Full=CASP-like protein RCOM_0299440
           gi|223527078|gb|EEF29260.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 186

 Score =  155 bits (393), Expect = 8e-36
 Identities = 83/154 (53%), Positives = 98/154 (63%)
 Frame = +1

Query: 67  SIELGEASSRASVHRRGMNKGASILDFVXXXXXXXXXXXXXXXMGTTDETLPFFTQFIRF 246
           +IELG A     +   G N+G SILDF+               MGTT+ETLPF TQFIRF
Sbjct: 5   AIELGVAKDSTPIG--GANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFIRF 62

Query: 247 KAEYNDLPSFTFFVVANSVVSAYLVLSLILSIYHISRTGSRNSRVVLIFFDTXXXXXXXX 426
           +AEY+DLP+FTFFVVAN VVS YL+LSL LSI +I R+ ++N R++LI FDT        
Sbjct: 63  RAEYDDLPTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALLTA 122

Query: 427 XXXXXXXXXXXXHKGNVRANWFAICQQFNSFCER 528
                       HKGN RANWFAICQQFNSFCER
Sbjct: 123 GASAAAAIVYLAHKGNTRANWFAICQQFNSFCER 156


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