BLASTX nr result
ID: Cimicifuga21_contig00017624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00017624 (211 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cuc... 69 5e-10 ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|2... 69 5e-10 ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|2... 65 4e-09 ref|XP_004171423.1| PREDICTED: LOW QUALITY PROTEIN: protein TIME... 62 5e-08 emb|CBI26227.3| unnamed protein product [Vitis vinifera] 58 7e-07 >ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cucumis sativus] Length = 1560 Score = 68.6 bits (166), Expect = 5e-10 Identities = 35/50 (70%), Positives = 41/50 (82%), Gaps = 1/50 (2%) Frame = -3 Query: 149 RKKMKQIGPKHRPPKISNKPSSI-QDEIEIEVAEVLYGLMTQSQRPSRQE 3 RKK+KQ GPK RP K S+KPSS+ QDEIEIE+AEVLYG+M Q Q P +QE Sbjct: 228 RKKLKQTGPKLRPLKSSSKPSSMAQDEIEIEIAEVLYGMMRQPQAPPKQE 277 >ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|222851436|gb|EEE88983.1| predicted protein [Populus trichocarpa] Length = 1518 Score = 68.6 bits (166), Expect = 5e-10 Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 1/50 (2%) Frame = -3 Query: 149 RKKMKQIGPKHRPPKISNKP-SSIQDEIEIEVAEVLYGLMTQSQRPSRQE 3 +KKMK GPK +PPK S+KP SS QDEIE E+AEVLYGL+ Q Q PS+QE Sbjct: 164 KKKMKPNGPKQKPPKSSSKPNSSAQDEIEFEIAEVLYGLLRQPQAPSKQE 213 >ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|222864822|gb|EEF01953.1| predicted protein [Populus trichocarpa] Length = 1202 Score = 65.5 bits (158), Expect = 4e-09 Identities = 31/49 (63%), Positives = 38/49 (77%) Frame = -3 Query: 149 RKKMKQIGPKHRPPKISNKPSSIQDEIEIEVAEVLYGLMTQSQRPSRQE 3 +KKMK GPK RPPK S+K +S QDEIE E+AEVLYGL+ Q Q ++QE Sbjct: 255 KKKMKPNGPKQRPPKSSSKSTSAQDEIEFEIAEVLYGLLRQPQGATKQE 303 >ref|XP_004171423.1| PREDICTED: LOW QUALITY PROTEIN: protein TIME FOR COFFEE-like, partial [Cucumis sativus] Length = 624 Score = 62.0 bits (149), Expect = 5e-08 Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%) Frame = -3 Query: 137 KQIGPKHRPPKISNKPSSI-QDEIEIEVAEVLYGLMTQSQRPSRQE 3 KQ GPK RP K S+KPSS+ QDEIEIE+AEVLYG+M Q Q P +QE Sbjct: 227 KQTGPKLRPLKSSSKPSSMAQDEIEIEIAEVLYGMMRQPQAPPKQE 272 >emb|CBI26227.3| unnamed protein product [Vitis vinifera] Length = 966 Score = 58.2 bits (139), Expect = 7e-07 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 1/50 (2%) Frame = -3 Query: 149 RKKMKQIGPKHRPPKISNK-PSSIQDEIEIEVAEVLYGLMTQSQRPSRQE 3 RKKMK GPK RPPK S+K SSIQ++IEIEVAE L +M QSQ PS+QE Sbjct: 220 RKKMKPNGPKLRPPKSSSKASSSIQEDIEIEVAEAL-AVMRQSQGPSKQE 268