BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017575
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata sub...    80   2e-13
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|NP_200453.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    77   1e-12
gb|AAL09802.1| AT5g56420/MCD7_18 [Arabidopsis thaliana]                77   1e-12

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
 Frame = -3

Query: 409 FIDFVDRVLFLNDVPNIHKFNLTCR-ECDAAHINEWISNLMGREVQELTISI-DNISSAT 236
           F+DFVDRVL L    NI +F L+C  + D + +  WIS  + R V++L + + D  +S  
Sbjct: 81  FMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASFV 140

Query: 235 FPCSLFTCESRRILKIEMRACVKFSASICFSSLKVLHLKNITFFSDQAIQKITISCPILE 56
            P  LF CE+   L+I M   +K  +SI  S LK+L+L  + F  D + Q++  S P L 
Sbjct: 141 LPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQL-FSLPNLV 199

Query: 55  EFVLHNCTWLEVKTVNIS 2
           E  +H C W+ +  V+IS
Sbjct: 200 ELEIHECNWMNLVAVSIS 217


>ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311982|gb|EFH42406.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
 Frame = -3

Query: 409 FIDFVDRVLFLNDVPNIHKFNLTCRE-CDAAH--INEWISNLMGREVQELTISI-DNISS 242
           F  FVDR L L+  P +   N++    C  A   +  W+   + R V+EL IS       
Sbjct: 62  FSQFVDRSLLLHKAPTLESLNISIGSLCYTAEKDVGVWVRIGVDRFVRELNISYCSGEEP 121

Query: 241 ATFPCSLFTCESRRILKIEMRACVKFSASICFSSLKVLHLKNITFFSDQAIQKITISCPI 62
              P  LFTC +  +LK+E  + V  S  +CF S+K LHL ++ +  DQ++ +I  SC  
Sbjct: 122 IRLPKCLFTCTTLAVLKLENISLVDASCYVCFQSVKTLHLLDVKYLDDQSLPRIISSCSS 181

Query: 61  LEEFVLHNCTWLEVKTVNIS 2
           LE+ V+  C    VK V+I+
Sbjct: 182 LEDLVVQRCPGDNVKVVSIT 201


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
 Frame = -3

Query: 409 FIDFVDRVLFLNDVPNIHKFNLTCRECDAAHINEWISNLMGREVQELTISI---DNISSA 239
           F++ V+RVL L D  NI KF L+C   DA     W+S  + R V+EL ++        S 
Sbjct: 94  FMNSVERVLLLRDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYEGGESESF 153

Query: 238 TFPCSLFTCESRRILKIEMRACVKFSASICFSSLKVLHLKNITFFSDQAIQKITISCPIL 59
             P  LFTC +   LKI     ++ S+SI    LK+L L+++ F  + + Q+I ++   L
Sbjct: 154 VSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQI-LNLRTL 212

Query: 58  EEFVLHNCTWLEVKTVNIS 2
           E+  +    W  +K + IS
Sbjct: 213 EKLKISYYDWKNLKAITIS 231


>ref|NP_200453.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|42573694|ref|NP_974943.1| F-box/FBD/LRR-repeat
           protein [Arabidopsis thaliana]
           gi|75262699|sp|Q9FM89.1|FDL38_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At5g56420
           gi|10177841|dbj|BAB11270.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009379|gb|AED96762.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|332009380|gb|AED96763.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 422

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
 Frame = -3

Query: 409 FIDFVDRVLFLNDVPNIHKFNLTCRE-CDAAH--INEWISNLMGREVQELTISI-DNISS 242
           F  FVDR L L+  P +   N+     C  A   +  W+   + R V+EL++S       
Sbjct: 62  FSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEP 121

Query: 241 ATFPCSLFTCESRRILKIEMRACVKFSASICFSSLKVLHLKNITFFSDQAIQKITISCPI 62
              P  LFTC +  +LK+E       S  +CF SLK LHL ++ +  DQ++ +I  SC  
Sbjct: 122 IRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSS 181

Query: 61  LEEFVLHNCTWLEVKTVNIS 2
           LE+ V+  C    VK V ++
Sbjct: 182 LEDLVVQRCPGDNVKVVTVT 201


>gb|AAL09802.1| AT5g56420/MCD7_18 [Arabidopsis thaliana]
          Length = 401

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
 Frame = -3

Query: 409 FIDFVDRVLFLNDVPNIHKFNLTCRE-CDAAH--INEWISNLMGREVQELTISI-DNISS 242
           F  FVDR L L+  P +   N+     C  A   +  W+   + R V+EL++S       
Sbjct: 41  FSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEP 100

Query: 241 ATFPCSLFTCESRRILKIEMRACVKFSASICFSSLKVLHLKNITFFSDQAIQKITISCPI 62
              P  LFTC +  +LK+E       S  +CF SLK LHL ++ +  DQ++ +I  SC  
Sbjct: 101 IRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSS 160

Query: 61  LEEFVLHNCTWLEVKTVNIS 2
           LE+ V+  C    VK V ++
Sbjct: 161 LEDLVVQRCPGDNVKVVTVT 180